Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031088.2 Cucumis melo HOM05D002864 ORTHO05D008485 1.6e-27 125.2 57 100.0
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 7.7e-09 63.2 42 66.7
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.3e-08 62.4 40 67.5
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.3e-08 62.4 40 67.5
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 5.0e-08 60.5 49 57.1
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 6.5e-08 60.1 39 66.7
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 6.5e-08 60.1 42 64.3
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 6.5e-08 60.1 42 64.3
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 6.5e-08 60.1 42 64.3
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 8.5e-08 59.7 43 62.8
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 8.5e-08 59.7 39 66.7
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 1.1e-07 59.3 39 64.1
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 1.1e-07 59.3 39 64.1
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 1.1e-07 59.3 39 64.1
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 64.1
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 2.5e-07 58.2 39 61.5
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 4.2e-07 57.4 40 62.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 9.4e-07 56.2 36 66.7
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 9.4e-07 56.2 38 63.2
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 1.2e-06 55.8 40 65.0
Solyc11g043190.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.2e-06 55.8 48 58.3
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 1.6e-06 55.5 40 65.0
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-06 54.7 40 62.5
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-06 54.7 40 62.5
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 3.6e-06 54.3 32 71.9
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 3.6e-06 54.3 32 71.9
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 3.6e-06 54.3 32 71.9
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 6.1e-06 53.5 41 61.0
CAN.G1439.9 Capsicum annuum HOM05D002864 ORTHO05D008485 7.9e-06 53.1 32 71.9


User provided reference genes

Program Settings