Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030883.2 Cucumis melo HOM05D034120 ORTHO05D034631 7.1e-46 186.8 88 100.0
ClCG07G002040 Citrullus lanatus HOM05D034120 ORTHO05D034631 5.7e-19 97.4 63 77.8
Sed0020997 Sechium edule HOM05D034120 ORTHO05D034631 3.2e-14 81.6 61 67.2
Sopen09g022570 Solanum pennellii HOM05D002186 ORTHO05D002225 2.8e-10 68.6 67 50.7
PGSC0003DMG400027945 Solanum tuberosum HOM05D002186 ORTHO05D002225 4.8e-10 67.8 67 50.7
Solyc09g059430.3 Solanum lycopersicum HOM05D002186 ORTHO05D002225 1.1e-09 66.6 67 49.3
CAN.G5.47 Capsicum annuum HOM05D002186 ORTHO05D002225 5.9e-08 60.8 57 52.6
MSTRG.17997 Avicennia marina HOM05D002186 ORTHO05D002225 2.9e-07 58.5 62 48.4
AL3G42050 Arabidopsis lyrata HOM05D001153 ORTHO05D000949 3.8e-07 58.2 73 37.0
AT2G04410 Arabidopsis thaliana HOM05D001153 ORTHO05D000949 3.8e-07 58.2 73 37.0
CAN.G874.2 Capsicum annuum HOM05D002186 ORTHO05D002225 3.8e-07 58.2 69 47.8
Eucgr.K02142 Eucalyptus grandis HOM05D002186 ORTHO05D002225 3.8e-07 58.2 72 45.8
MBI11_g07441_MAGBIO Magnolia biondii HOM05D002186 ORTHO05D002225 3.8e-07 58.2 52 53.8
Manes.13G048800 Manihot esculenta HOM05D002186 ORTHO05D002225 3.8e-07 58.2 47 61.7
Oeu002753.1 Olea europaea HOM05D002186 ORTHO05D002225 3.8e-07 58.2 57 49.1
MSTRG.20966 Avicennia marina HOM05D002186 ORTHO05D002225 5.0e-07 57.8 46 58.7
Cc09_g01050 Coffea canephora HOM05D002186 ORTHO05D002225 5.0e-07 57.8 60 45.0
Peaxi162Scf00652g00120 Petunia axillaris HOM05D002186 ORTHO05D002225 5.0e-07 57.8 66 43.9
Solyc11g012010.2 Solanum lycopersicum HOM05D002186 ORTHO05D002225 5.0e-07 57.8 65 43.1
CSS0036176 Camellia sinensis var. sinensis HOM05D001153 ORTHO05D000949 6.5e-07 57.4 79 36.7
Nitab4.5_0000850g0150 Nicotiana tabacum HOM05D002186 ORTHO05D002225 6.5e-07 57.4 70 45.7
Nitab4.5_0003020g0010 Nicotiana tabacum HOM05D002186 ORTHO05D002225 6.5e-07 57.4 75 42.7
Carub.0003s2606 Capsella rubella HOM05D001153 ORTHO05D000949 8.5e-07 57.0 71 36.6
Migut.H01752 Erythranthe guttata HOM05D001153 ORTHO05D000949 8.5e-07 57.0 68 36.8
Manes.15G055600 Manihot esculenta HOM05D002186 ORTHO05D002225 8.5e-07 57.0 56 48.2
Oeu037768.2 Olea europaea HOM05D002186 ORTHO05D002225 8.5e-07 57.0 62 51.6
CAN.G767.9 Capsicum annuum HOM05D002186 ORTHO05D002225 1.1e-06 56.6 68 45.6
Peaxi162Scf00238g00037 Petunia axillaris HOM05D002186 ORTHO05D002225 1.1e-06 56.6 60 45.0
Actinidia35853 Actinidia chinensis HOM05D002186 ORTHO05D002225 1.4e-06 56.2 68 44.1
Hma1.2p1_0149F.1_g066350 Hydrangea macrophylla HOM05D002186 ORTHO05D002225 1.4e-06 56.2 62 46.8
GSVIVG01004747001 Vitis vinifera HOM05D002186 ORTHO05D002225 1.4e-06 56.2 69 44.9
ATR1128G106 Amborella trichopoda HOM05D002186 ORTHO05D002225 1.9e-06 55.8 49 53.1
Haze_11636 Corylus avellana HOM05D002186 ORTHO05D002225 1.9e-06 55.8 70 42.9
PSO357G0378 Papaver somniferum HOM05D002186 ORTHO05D002225 1.9e-06 55.8 58 48.3
Solyc12g098440.2 Solanum lycopersicum HOM05D002186 ORTHO05D002225 1.9e-06 55.8 68 44.1
Sopen12g033220 Solanum pennellii HOM05D002186 ORTHO05D002225 1.9e-06 55.8 68 44.1
PGSC0003DMG400004571 Solanum tuberosum HOM05D002186 ORTHO05D002225 1.9e-06 55.8 68 44.1
DCAR_026635 Daucus carota HOM05D002186 ORTHO05D002225 2.5e-06 55.5 69 42.0
ECA247G1857 Erigeron canadensis HOM05D002186 ORTHO05D002225 2.5e-06 55.5 73 45.2
Migut.N00628 Erythranthe guttata HOM05D002186 ORTHO05D002225 2.5e-06 55.5 67 47.8
HanXRQChr07g0189521 Helianthus annuus HOM05D002186 ORTHO05D002225 2.5e-06 55.5 67 47.8
CARHR102270 Cardamine hirsuta HOM05D001153 ORTHO05D000949 3.2e-06 55.1 71 35.2
Migut.M01646 Erythranthe guttata HOM05D001153 ORTHO05D000949 3.2e-06 55.1 71 35.2
Nitab4.5_0000045g0460 Nicotiana tabacum HOM05D002186 ORTHO05D002225 3.2e-06 55.1 35 68.6
Nitab4.5_0007437g0020 Nicotiana tabacum HOM05D002186 ORTHO05D002225 3.2e-06 55.1 35 68.6
PSO170G5184 Papaver somniferum HOM05D002186 ORTHO05D002225 3.2e-06 55.1 58 48.3
SalBow8G3195 Salvia bowleyana HOM05D002186 ORTHO05D010875 3.2e-06 55.1 67 38.8
SGA_v2.0_scaffold6G03221 Striga asiatica HOM05D002186 ORTHO05D002225 3.2e-06 55.1 45 60.0
Actinidia30392 Actinidia chinensis HOM05D001153 ORTHO05D000949 4.2e-06 54.7 74 40.5
Cfa014948 Carpinus fangiana HOM05D002186 ORTHO05D002225 4.2e-06 54.7 70 42.9
Dinv13953 Davidia involucrata HOM05D002186 ORTHO05D002225 4.2e-06 54.7 61 47.5
Thhalv10002884m.g Eutrema salsugineum HOM05D001153 ORTHO05D000949 4.2e-06 54.7 71 35.2
Nn1g03155 Nelumbo nucifera HOM05D001153 ORTHO05D000949 4.2e-06 54.7 71 33.8
Nitab4.5_0008794g0020 Nicotiana tabacum HOM05D002186 ORTHO05D002225 4.2e-06 54.7 72 43.1
Phvul.008G279500 Phaseolus vulgaris HOM05D001153 ORTHO05D000949 4.2e-06 54.7 72 38.9
Psat3g148160 Pisum sativum HOM05D002186 ORTHO05D002225 4.2e-06 54.7 45 60.0
CDE05G1168 Ceratophyllum demersum HOM05D002186 ORTHO05D002225 5.5e-06 54.3 78 35.9
LjContig00081g0013704 Lotus japonicus HOM05D007947 ORTHO05D010018 5.5e-06 54.3 85 37.6
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 5.5e-06 54.3 75 41.3
Sp3g23220 Schrenkiella parvula HOM05D001153 ORTHO05D000949 5.5e-06 54.3 71 35.2
PGSC0003DMG400036375 Solanum tuberosum HOM05D002186 ORTHO05D002225 5.5e-06 54.3 65 41.5
Ah.13g078040 Amaranthus hybridus HOM05D003998 ORTHO05D005144 7.2e-06 53.9 70 44.3
Migut.M01348 Erythranthe guttata HOM05D002186 ORTHO05D002225 7.2e-06 53.9 56 50.0
Medtr8g012960 Medicago truncatula HOM05D002186 ORTHO05D002225 7.2e-06 53.9 61 50.8
CANSAT01G0795 Cannabis sativa HOM05D002186 ORTHO05D002225 9.4e-06 53.5 44 61.4
CANSAT01G1734 Cannabis sativa HOM05D002186 ORTHO05D002225 9.4e-06 53.5 44 61.4
CAN.G1186.12 Capsicum annuum HOM05D002186 ORTHO05D002225 9.4e-06 53.5 65 40.0
Lalb_Chr10g0107441 Lupinus albus HOM05D001153 ORTHO05D000949 9.4e-06 53.5 74 35.1
Nitab4.5_0000676g0080 Nicotiana tabacum HOM05D002186 ORTHO05D002225 9.4e-06 53.5 70 42.9
Rhsim06G0230600 Rhododendron simsii HOM05D001153 ORTHO05D000949 9.4e-06 53.5 72 38.9


User provided reference genes

Program Settings