Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029829.2 Cucumis melo HOM05D001200 ORTHO05D009713 2.7e-27 124.4 55 100.0
MELO3C027236.2 Cucumis melo HOM05D001200 ORTHO05D009713 2.1e-24 114.8 55 90.9
Sed0023939 Sechium edule HOM05D001200 ORTHO05D009713 2.1e-24 114.8 55 90.9
C07p33440 Brassica napus HOM05D001200 ORTHO05D009713 1.4e-23 112.1 55 89.1
C09p24630 Brassica napus HOM05D001200 ORTHO05D009713 1.4e-23 112.1 55 89.1
C09p40200 Brassica napus HOM05D001200 ORTHO05D009713 1.4e-23 112.1 55 89.1
AL9U11952 Arabidopsis lyrata HOM05D001200 ORTHO05D009713 1.8e-23 111.7 54 88.9
C09p40360 Brassica napus HOM05D001200 ORTHO05D009713 4.0e-23 110.5 55 87.3
BolC9t56924H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-23 110.5 55 87.3
Gorai.004G082100 Gossypium raimondii HOM05D001200 ORTHO05D009713 1.2e-22 109.0 55 85.5
HanXRQChr14g0428461 Helianthus annuus HOM05D001200 ORTHO05D009713 3.4e-22 107.5 55 85.5
CARHR258570 Cardamine hirsuta HOM05D001200 ORTHO05D009713 7.6e-22 106.3 55 87.3
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.9e-21 104.4 55 83.6
Gohir.D08G077250 Gossypium hirsutum HOM05D001200 ORTHO05D009713 1.9e-20 101.7 55 81.8
TPR.G30364 Trifolium pratense HOM05D001200 ORTHO05D009713 3.5e-19 97.4 49 85.7
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 4.6e-19 97.1 52 82.7
Lalb_Chr13g0292811 Lupinus albus HOM05D001200 ORTHO05D009713 6.0e-19 96.7 47 85.1
CAN.G8.22 Capsicum annuum HOM05D001200 ORTHO05D009713 7.9e-19 96.3 55 80.0
Glyma.18G155300 Glycine max HOM05D001200 ORTHO05D009713 1.1e-17 92.4 55 72.7
Potri.019G014344 Populus trichocarpa HOM05D001200 ORTHO05D009713 2.5e-17 91.3 55 72.7
CAN.G904.13 Capsicum annuum HOM05D001200 ORTHO05D009713 1.3e-16 89.0 46 80.4
BolC9t56806H Brassica oleracea HOM05D001200 ORTHO05D009713 4.8e-16 87.0 44 84.1
Solyc02g011760.1 Solanum lycopersicum HOM05D001200 ORTHO05D009713 6.2e-16 86.7 49 79.6
Sed0013644 Sechium edule HOM05D000533 ORTHO05D006151 9.0e-15 82.8 55 69.1
Sed0016654 Sechium edule HOM05D000533 ORTHO05D006151 9.0e-15 82.8 55 69.1
Sed0021575 Sechium edule HOM05D000533 ORTHO05D006151 9.0e-15 82.8 55 69.1
arahy.Tifrunner.gnm1.ann1.WH1VZM Arachis hypogaea HOM05D001200 ORTHO05D009713 5.8e-14 80.1 54 70.4
BraSC25t45909Z Brassica rapa HOM05D001200 ORTHO05D009713 5.8e-14 80.1 55 67.3
BolSC45t60910H Brassica oleracea HOM05D001200 ORTHO05D009713 2.2e-13 78.2 55 67.3
SMO086G0058 Selaginella moellendorffii HOM05D001200 ORTHO05D009713 2.9e-13 77.8 53 69.8
BolC9t56926H Brassica oleracea HOM05D001200 ORTHO05D009713 3.8e-13 77.4 55 65.5
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 3.8e-13 77.4 55 63.6
Lalb_Chr18g0049421 Lupinus albus HOM05D001200 ORTHO05D009713 5.0e-13 77.0 50 72.0
C04p22670 Brassica napus HOM05D001200 ORTHO05D009713 6.5e-13 76.6 55 65.5
ATCG01060 Arabidopsis thaliana HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BolSC29t60505H Brassica oleracea HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BolSC35t60703H Brassica oleracea HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BolSC37t60792H Brassica oleracea HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BolSC46t60959H Brassica oleracea HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BolSC49t61142H Brassica oleracea HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BraSC103t45428Z Brassica rapa HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BraSC143t45661Z Brassica rapa HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BraSC179t45775Z Brassica rapa HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
BraSC59t46550Z Brassica rapa HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
CAN.G1526.3 Capsicum annuum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
CAN.G1526.8 Capsicum annuum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
CAN.G278.4 Capsicum annuum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Migut.D01253 Erythranthe guttata HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Gohir.1Z049631 Gossypium hirsutum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Gohir.A02G134400 Gossypium hirsutum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Gohir.A09G046200 Gossypium hirsutum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Hma1.2p1_0382F.1_g140210 Hydrangea macrophylla HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
Nn064s42211 Nelumbo nucifera HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
PSO548G0036 Papaver somniferum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
PGR111G0008 Punica granatum HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
RcHm_v2.0_Chr5g0017221 Rosa chinensis HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
RcHm_v2.0_Chr5g0043041 Rosa chinensis HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
RcHm_v2.0_CPg0502781 Rosa chinensis HOM05D001200 ORTHO05D009713 8.4e-13 76.3 55 65.5
HanXRQChr00c0336g0573651 Helianthus annuus HOM05D001200 ORTHO05D009713 1.4e-12 75.5 55 63.6
HanXRQChr00c0504g0575301 Helianthus annuus HOM05D001200 ORTHO05D009713 1.4e-12 75.5 55 63.6
HanXRQChr08g0213671 Helianthus annuus HOM05D001200 ORTHO05D009713 1.4e-12 75.5 48 68.8
HanXRQChr09g0246671 Helianthus annuus HOM05D001200 ORTHO05D009713 1.4e-12 75.5 55 63.6
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 1.4e-12 75.5 55 63.6
Gohir.D06G133600 Gossypium hirsutum HOM05D001200 ORTHO05D009713 1.9e-12 75.1 55 63.6
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 2.5e-12 74.7 55 63.6
Nitab4.5_0001313g0070 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.5e-12 74.7 55 63.6
Nn3g20217 Nelumbo nucifera HOM05D001200 ORTHO05D009713 3.2e-12 74.3 55 61.8
CAN.G965.7 Capsicum annuum HOM05D001200 ORTHO05D009713 4.2e-12 73.9 55 63.6
HanXRQChr02g0038661 Helianthus annuus HOM05D001200 ORTHO05D009713 4.2e-12 73.9 55 61.8
C09p40340 Brassica napus HOM05D001200 ORTHO05D009713 5.5e-12 73.6 56 66.1
Gorai.009G377500 Gossypium raimondii HOM05D001200 ORTHO05D009713 5.5e-12 73.6 55 63.6
DCAR_032537 Daucus carota HOM05D001200 ORTHO05D009713 9.3e-12 72.8 55 63.6
BolC7t43855H Brassica oleracea HOM05D001200 ORTHO05D009713 1.6e-11 72.0 38 81.6
Nn1g00557 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.6e-11 72.0 55 60.0
BraSC138t45535Z Brassica rapa HOM05D001200 ORTHO05D009713 2.1e-11 71.6 39 76.9
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.7e-11 71.2 52 63.5
Oeu043656.1 Olea europaea HOM05D001200 ORTHO05D009713 2.7e-11 71.2 55 61.8
Hund03918 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.7e-11 71.2 43 72.1
HanXRQChr09g0244731 Helianthus annuus HOM05D001200 ORTHO05D009713 6.1e-11 70.1 50 64.0
Os09g0485201 Oryza sativa ssp. japonica HOM05D001200 ORTHO05D009713 6.1e-11 70.1 55 61.8
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-11 69.7 51 62.7
CARHR282430 Cardamine hirsuta HOM05D001200 ORTHO05D009713 1.0e-10 69.3 55 61.8
Hund24329 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.0e-10 69.3 55 61.8
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 3.9e-10 67.4 50 62.0
arahy.Tifrunner.gnm1.ann1.USFH3V Arachis hypogaea HOM05D001200 ORTHO05D009713 6.7e-10 66.6 54 55.6
Cpa.g.sc63.22 Carica papaya HOM05D001200 ORTHO05D009713 6.7e-10 66.6 55 60.0
Hund10653 Selenicereus undatus HOM05D001200 ORTHO05D002731 8.7e-10 66.2 49 67.3
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 1.5e-09 65.5 55 60.0
Medtr4g026420 Medicago truncatula HOM05D001200 ORTHO05D009713 9.7e-09 62.8 38 76.3
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.6e-08 62.0 47 59.6
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-07 58.9 54 53.7
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-07 58.9 54 53.7
Hund27630 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.8e-07 58.5 54 51.9
Hund28597 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.8e-07 58.5 54 51.9
Gohir.A09G017925 Gossypium hirsutum HOM05D001200 ORTHO05D009713 3.1e-07 57.8 45 57.8
CsaV3_6G032290 Cucumis sativus L. HOM05D001200 ORTHO05D002731 1.2e-06 55.8 28 82.1
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.4e-06 54.3 48 54.2
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-06 53.9 49 53.1
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-06 53.9 49 53.1
Hund28851 Selenicereus undatus HOM05D001200 ORTHO05D009713 4.5e-06 53.9 49 53.1
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 4.5e-06 53.9 49 53.1
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-06 53.9 49 53.1


User provided reference genes

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