Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.9e-171 605.1 301 100.0
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 5.6e-50 202.2 105 95.2
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 9.9e-47 191.4 101 91.1
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 4.6e-44 182.6 105 84.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.2e-37 159.8 100 76.0
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.2e-37 159.5 108 71.3
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.2e-36 157.9 108 70.4
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 4.6e-36 156.0 108 69.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 4.6e-36 156.0 101 71.3
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 6.0e-36 155.6 101 73.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 6.0e-36 155.6 105 68.6
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.0e-35 154.8 99 73.7
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.3e-35 154.5 105 68.6
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.3e-35 154.5 105 66.7
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.0e-35 153.3 105 70.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 3.9e-35 152.9 105 68.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.9e-35 152.9 101 71.3
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.9e-35 152.9 105 69.5
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 5.1e-35 152.5 112 64.3
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.1e-35 152.5 99 70.7
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 6.6e-35 152.1 101 69.3
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.7e-35 151.8 105 69.5
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.1e-34 151.4 105 65.7
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 3.3e-34 149.8 113 65.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.3e-34 149.4 99 69.7
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 4.3e-34 149.4 100 71.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.6e-34 149.1 108 68.5
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 5.6e-34 149.1 105 66.7
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 7.3e-34 148.7 101 67.3
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.3e-34 148.7 120 60.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 7.3e-34 148.7 120 60.0
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 7.3e-34 148.7 105 65.7
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 7.3e-34 148.7 108 64.8
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 9.6e-34 148.3 105 66.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.2e-33 147.9 101 67.3
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.6e-33 147.5 109 60.6
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-33 147.5 99 68.7
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 1.6e-33 147.5 100 69.0
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 2.1e-33 147.1 109 62.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 2.1e-33 147.1 99 68.7
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.1e-33 147.1 105 67.6
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.8e-33 146.7 109 62.4
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.8e-33 146.7 120 59.2
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.8e-33 146.7 120 59.2
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 2.8e-33 146.7 105 67.6
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 6.2e-33 145.6 105 69.5
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 6.2e-33 145.6 101 69.3
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.2e-33 145.6 100 67.0
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.1e-32 144.8 98 70.4
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.1e-32 144.8 98 70.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.4e-32 144.4 101 68.3
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.4e-32 144.4 100 68.0
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 2.4e-32 143.7 98 68.4
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 2.4e-32 143.7 105 64.8
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.4e-32 143.7 111 61.3
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.4e-32 143.7 111 64.0
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.1e-32 143.3 105 66.7
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 4.0e-32 142.9 109 60.6
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 5.3e-32 142.5 101 65.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 5.3e-32 142.5 98 69.4
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 5.3e-32 142.5 105 63.8
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 5.3e-32 142.5 105 66.7
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 6.9e-32 142.1 101 67.3
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 6.9e-32 142.1 105 65.7
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 6.9e-32 142.1 101 65.3
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 6.9e-32 142.1 111 63.1
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 9.0e-32 141.7 100 66.0
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 9.0e-32 141.7 101 63.4
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.2e-31 141.4 111 61.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.5e-31 141.0 102 67.6
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.6e-31 140.2 107 61.7
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 2.6e-31 140.2 111 61.3
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 4.4e-31 139.4 111 61.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 5.8e-31 139.0 117 59.0
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 9.9e-31 138.3 103 64.1
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 9.9e-31 138.3 103 64.1
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.3e-30 137.9 111 60.4
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.3e-30 137.9 111 60.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.7e-30 137.5 113 58.4
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 2.2e-30 137.1 105 65.7
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.9e-30 136.0 111 59.5
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 4.9e-30 136.0 99 63.6
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.2e-28 131.3 98 59.2
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.2e-28 131.3 98 58.2
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 4.6e-28 129.4 101 60.4
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.0e-28 129.0 125 54.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.0e-27 128.3 98 61.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.0e-27 126.7 85 69.4
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 8.7e-27 125.2 85 69.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.5e-26 124.4 116 52.6
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.1e-25 120.6 83 66.3
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.8e-25 120.2 88 65.9
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 6.2e-25 119.0 83 65.1
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 3.1e-24 116.7 83 62.7
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.2e-23 114.8 105 56.2
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.5e-23 112.8 101 53.5
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.4e-22 108.6 86 66.3
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.4e-21 107.8 104 49.0
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 3.2e-21 106.7 97 49.5
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 3.9e-19 99.8 123 46.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 7.4e-18 95.5 96 53.1
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.8e-17 93.6 83 49.4
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.2e-15 88.2 105 41.0
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.9e-14 83.6 98 49.0
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.6e-12 77.8 52 69.2
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-10 71.2 43 69.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.9e-10 70.9 53 56.6
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.6e-09 67.8 46 65.2
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 2.1e-09 67.4 117 31.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.4e-08 63.9 97 35.1
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.8e-07 59.3 53 49.1


User provided reference genes

Program Settings