Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029055.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.6e-61 238.4 112 100.0
MELO3C029465.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.2e-28 129.0 157 51.6
MELO3C035601.2 Cucumis melo HOM05D001347 ORTHO05D005467 9.4e-27 123.6 63 95.2
MELO3C027980.2 Cucumis melo HOM05D000247 ORTHO05D005467 6.1e-26 120.9 89 69.7
MELO3C034389.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.3e-25 119.0 61 95.1
MELO3C031393.2 Cucumis melo HOM05D005653 ORTHO05D005467 5.2e-25 117.9 60 93.3
MELO3C010009.2 Cucumis melo HOM05D000247 ORTHO05D005467 1.5e-24 116.3 85 72.9
MELO3C032626.2 Cucumis melo HOM05D013600 ORTHO05D005467 2.2e-23 112.5 59 93.2
ClCG03G011670 Citrullus lanatus HOM05D000247 ORTHO05D005467 2.8e-23 112.1 84 71.4
Sed0000929 Sechium edule HOM05D000247 ORTHO05D005467 3.7e-23 111.7 84 70.2
CsaV3_1G044160 Cucumis sativus L. HOM05D000247 ORTHO05D005467 1.4e-22 109.8 84 70.2
Medtr7g080250 Medicago truncatula HOM05D000247 ORTHO05D005467 1.4e-22 109.8 81 70.4
MELO3C028936.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.4e-22 109.0 76 76.3
MELO3C034498.2 Cucumis melo HOM05D000247 ORTHO05D005467 3.1e-22 108.6 112 56.2
TWI36G0515 Tripterygium wilfordii HOM05D000247 ORTHO05D005467 3.1e-22 108.6 63 85.7
Sed0017668 Sechium edule HOM05D000247 ORTHO05D005467 4.1e-22 108.2 84 66.7
TPR.G23770 Trifolium pratense HOM05D000247 ORTHO05D005467 5.3e-22 107.8 80 71.2
Lalb_Chr01g0020531 Lupinus albus HOM05D000247 ORTHO05D005467 1.2e-21 106.7 81 69.1
Psat3g102640 Pisum sativum HOM05D000247 ORTHO05D005467 2.0e-21 105.9 57 91.2
Actinidia03277 Actinidia chinensis HOM05D000247 ORTHO05D005467 2.6e-21 105.5 85 64.7
Manes.13G004600 Manihot esculenta HOM05D000247 ORTHO05D005467 2.6e-21 105.5 84 66.7
Actinidia06800 Actinidia chinensis HOM05D000247 ORTHO05D005467 3.5e-21 105.1 57 87.7
Cc09_g03800 Coffea canephora HOM05D000247 ORTHO05D005467 4.5e-21 104.8 84 66.7
CSS0010092 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D005467 5.9e-21 104.4 84 67.9
Migut.F01866 Erythranthe guttata HOM05D000247 ORTHO05D005467 5.9e-21 104.4 80 68.8
Lalb_Chr03g0038711 Lupinus albus HOM05D000247 ORTHO05D005467 5.9e-21 104.4 56 91.1
Phvul.008G053300 Phaseolus vulgaris HOM05D000247 ORTHO05D005467 5.9e-21 104.4 84 67.9
TWI75G1857 Tripterygium wilfordii HOM05D000247 ORTHO05D005467 5.9e-21 104.4 81 65.4
CiPaw.07G081500 Carya illinoinensis HOM05D000247 ORTHO05D005467 7.7e-21 104.0 85 65.9
Lj1g0021551 Lotus japonicus HOM05D000247 ORTHO05D005467 7.7e-21 104.0 81 66.7
MD12G1263900 Malus domestica HOM05D000247 ORTHO05D005467 7.7e-21 104.0 84 66.7
Hma1.2p1_0609F.1_g188510 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 1.0e-20 103.6 85 65.9
MBI11_g00130_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D005467 1.0e-20 103.6 85 65.9
SGA_v2.0_scaffold122G33187 Striga asiatica HOM05D000247 ORTHO05D005467 1.0e-20 103.6 81 67.9
Thecc.05G192000 Theobroma cacao HOM05D000247 ORTHO05D005467 1.0e-20 103.6 85 65.9
Atru.chr12.1750 Acer truncatum HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 64.7
arahy.Tifrunner.gnm1.ann1.2R4S5U Arachis hypogaea HOM05D000247 ORTHO05D005467 1.3e-20 103.2 56 89.3
arahy.Tifrunner.gnm1.ann1.MI3IQM Arachis hypogaea HOM05D000247 ORTHO05D005467 1.3e-20 103.2 56 89.3
Cfa006252 Carpinus fangiana HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 65.9
Haze_04582 Corylus avellana HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 65.9
Glyma.18G243200 Glycine max HOM05D000247 ORTHO05D005467 1.3e-20 103.2 84 66.7
Gohir.A13G114500 Gossypium hirsutum HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 64.7
Gohir.D13G117400 Gossypium hirsutum HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 64.7
Gorai.013G132000 Gossypium raimondii HOM05D000247 ORTHO05D005467 1.3e-20 103.2 85 64.7
CANSAT54G0629 Cannabis sativa HOM05D000247 ORTHO05D005467 1.7e-20 102.8 81 67.9
Duzib177G0105 Durio zibethinus HOM05D000247 ORTHO05D005467 1.7e-20 102.8 81 66.7
PGR031G3232 Punica granatum HOM05D000247 ORTHO05D005467 1.7e-20 102.8 84 65.5
vmacro19615 Vaccinium macrocarpon HOM05D000247 ORTHO05D005467 1.7e-20 102.8 57 86.0
Cpa.g.sc39.18 Carica papaya HOM05D000247 ORTHO05D005467 2.2e-20 102.4 85 64.7
Hma1.2p1_0609F.1_g188515 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 2.2e-20 102.4 57 87.7
Hma1.2p1_0609F.1_g188520 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 2.2e-20 102.4 57 87.7
AL3G12140 Arabidopsis lyrata HOM05D000247 ORTHO05D005467 3.8e-20 101.7 81 65.4
Thhalv10021615m.g Eutrema salsugineum HOM05D000247 ORTHO05D005467 3.8e-20 101.7 81 65.4
AT3G02730 Arabidopsis thaliana HOM05D000247 ORTHO05D005467 5.0e-20 101.3 81 65.4
Carub.0003s0183 Capsella rubella HOM05D000247 ORTHO05D005467 5.0e-20 101.3 81 65.4
CDE05G1927 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 5.0e-20 101.3 56 82.1
Dinv15375 Davidia involucrata HOM05D000247 ORTHO05D005467 5.0e-20 101.3 85 63.5
Eucgr.H01629 Eucalyptus grandis HOM05D000247 ORTHO05D005467 5.0e-20 101.3 57 86.0
Oeu034780.1 Olea europaea HOM05D000247 ORTHO05D005467 5.0e-20 101.3 84 64.3
Sp3g01760 Schrenkiella parvula HOM05D000247 ORTHO05D005467 5.0e-20 101.3 81 65.4
VMungo1383G3087 Vigna mungo HOM05D000247 ORTHO05D005467 5.0e-20 101.3 84 65.5
GSVIVG01019070001 Vitis vinifera HOM05D000247 ORTHO05D005467 5.0e-20 101.3 85 64.7
ATR0824G128 Amborella trichopoda HOM05D000247 ORTHO05D005467 6.5e-20 100.9 85 63.5
HanXRQChr17g0556061 Helianthus annuus HOM05D000247 ORTHO05D005467 6.5e-20 100.9 84 65.5
MD04G1246200 Malus domestica HOM05D000247 ORTHO05D005467 6.5e-20 100.9 84 65.5
Rhsim05G0167700 Rhododendron simsii HOM05D000247 ORTHO05D005467 6.5e-20 100.9 57 84.2
COL.COLO4_33466 Corchorus olitorius HOM05D000247 ORTHO05D005467 8.5e-20 100.5 85 64.7
RcHm_v2.0_Chr3g0447721 Rosa chinensis HOM05D000247 ORTHO05D005467 8.5e-20 100.5 85 63.5
CDE05G1910 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 1.1e-19 100.1 56 82.1
PGR119G0647 Punica granatum HOM05D000247 ORTHO05D005467 1.5e-19 99.8 85 61.2
Aa31LG5G13200 Aethionema arabicum HOM05D000247 ORTHO05D005467 1.9e-19 99.4 80 63.8
Aqoxy5G00017 Aquilegia oxysepala HOM05D000247 ORTHO05D005467 1.9e-19 99.4 81 64.2
Nn3g20156 Nelumbo nucifera HOM05D000247 ORTHO05D005467 1.9e-19 99.4 85 61.2
AT5G16400 Arabidopsis thaliana HOM05D000247 ORTHO05D005467 2.5e-19 99.0 80 63.8
BraA01t04621Z Brassica rapa HOM05D000247 ORTHO05D005467 3.2e-19 98.6 81 63.0
Eucgr.B01424 Eucalyptus grandis HOM05D000247 ORTHO05D005467 3.2e-19 98.6 56 85.7
Lsat_1_v5_gn_2_17480 Lactuca sativa HOM05D000247 ORTHO05D005467 3.2e-19 98.6 83 63.9
BNapus_Darmor_BZH_scaffold_99p00230 Brassica napus HOM05D000247 ORTHO05D005467 4.2e-19 98.2 81 63.0
Rhsim10G0057900 Rhododendron simsii HOM05D000247 ORTHO05D005467 4.2e-19 98.2 57 82.5
Solyc05g056300.4 Solanum lycopersicum HOM05D000247 ORTHO05D005467 4.2e-19 98.2 84 63.1
Sopen05g034690 Solanum pennellii HOM05D000247 ORTHO05D005467 4.2e-19 98.2 84 63.1
PGSC0003DMG400023333 Solanum tuberosum HOM05D000247 ORTHO05D005467 4.2e-19 98.2 84 63.1
CAN.G1921.8 Capsicum annuum HOM05D000247 ORTHO05D005467 5.5e-19 97.8 84 63.1
Potri.019G054800 Populus trichocarpa HOM05D000247 ORTHO05D005467 5.5e-19 97.8 81 64.2
Prupe.6G362500 Prunus persica HOM05D000247 ORTHO05D005467 5.5e-19 97.8 81 66.7
SalBow6G2018 Salvia bowleyana HOM05D000247 ORTHO05D005467 5.5e-19 97.8 89 60.7
HPP92_000446 Vanilla planifolia HOM05D000247 ORTHO05D005467 5.5e-19 97.8 84 63.1
Zm00001eb418040 Zea mays HOM05D000247 ORTHO05D005467 5.5e-19 97.8 57 86.0
AL6G27330 Arabidopsis lyrata HOM05D000247 ORTHO05D005467 7.2e-19 97.4 80 62.5
Carub.0006s1459 Capsella rubella HOM05D000247 ORTHO05D005467 7.2e-19 97.4 80 62.5
Sabra19G0063700 Salix brachista HOM05D000247 ORTHO05D005467 9.4e-19 97.1 80 65.0
CARHR196860 Cardamine hirsuta HOM05D000247 ORTHO05D005467 1.2e-18 96.7 80 62.5
BolC1t05881H Brassica oleracea HOM05D000247 ORTHO05D005467 1.6e-18 96.3 81 61.7
Thhalv10014778m.g Eutrema salsugineum HOM05D000247 ORTHO05D005467 1.6e-18 96.3 56 80.4
Peaxi162Scf00353g00731 Petunia axillaris HOM05D000247 ORTHO05D005467 1.6e-18 96.3 80 62.5
Migut.F02110 Erythranthe guttata HOM05D000247 ORTHO05D005467 2.1e-18 95.9 56 82.1
FvH4_6g00380 Fragaria vesca HOM05D000247 ORTHO05D005467 2.1e-18 95.9 82 64.6
FAN02G4262 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.1e-18 95.9 82 64.6
FAN09G0601 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.1e-18 95.9 82 64.6
FAN14G3072 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.1e-18 95.9 82 64.6
SalBow1G5091 Salvia bowleyana HOM05D000247 ORTHO05D005467 2.1e-18 95.9 80 62.5
Ciclev10013409m.g Citrus clementina HOM05D000247 ORTHO05D005467 2.7e-18 95.5 56 82.1
A05p44370 Brassica napus HOM05D000247 ORTHO05D005467 3.6e-18 95.1 81 59.3
C09p75870 Brassica napus HOM05D000247 ORTHO05D005467 3.6e-18 95.1 81 59.3
BolC5t35070H Brassica oleracea HOM05D000247 ORTHO05D005467 3.6e-18 95.1 81 59.3
BraA06t23293Z Brassica rapa HOM05D000247 ORTHO05D005467 3.6e-18 95.1 81 59.3
HanXRQChr08g0220871 Helianthus annuus HOM05D000247 ORTHO05D005467 3.6e-18 95.1 80 63.8
Nitab4.5_0000582g0020 Nicotiana tabacum HOM05D000247 ORTHO05D005467 3.6e-18 95.1 80 62.5
Nitab4.5_0013647g0010 Nicotiana tabacum HOM05D000247 ORTHO05D005467 3.6e-18 95.1 80 62.5
Os01g0913000 Oryza sativa ssp. japonica HOM05D000247 ORTHO05D005467 3.6e-18 95.1 85 62.4
PSO170G0238 Papaver somniferum HOM05D000247 ORTHO05D005467 3.6e-18 95.1 56 80.4
Lsat_1_v5_gn_0_10780 Lactuca sativa HOM05D000247 ORTHO05D005467 4.7e-18 94.7 56 80.4
Ah.06g195420 Amaranthus hybridus HOM05D000247 ORTHO05D005467 6.1e-18 94.4 81 59.3
MSTRG.9245 Avicennia marina HOM05D000247 ORTHO05D005467 6.1e-18 94.4 84 60.7
Zm00001eb354270 Zea mays HOM05D000247 ORTHO05D005467 6.1e-18 94.4 56 83.9
Sp6g27770 Schrenkiella parvula HOM05D000247 ORTHO05D005467 8.0e-18 94.0 80 58.8
Sc09g0001410 Simmondsia chinensis HOM05D000247 ORTHO05D005467 8.0e-18 94.0 57 78.9
THA.LOC104820923 Tarenaya hassleriana HOM05D000247 ORTHO05D005467 8.0e-18 94.0 84 59.5
THA.LOC104802956 Tarenaya hassleriana HOM05D000247 ORTHO05D005467 1.4e-17 93.2 56 78.6
BcaC05g30514 Brassica carinata HOM05D000247 ORTHO05D005467 1.8e-17 92.8 81 58.0
A02p03510 Brassica napus HOM05D000247 ORTHO05D005467 1.8e-17 92.8 56 75.0
ECA232G0920 Erigeron canadensis HOM05D000247 ORTHO05D005467 1.8e-17 92.8 56 80.4
CDE06G0663 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 2.3e-17 92.4 85 58.8
FAN05G0844 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.3e-17 92.4 82 62.2
Oeu009736.1 Olea europaea HOM05D000247 ORTHO05D005467 3.0e-17 92.0 83 59.0
PSO357G0377 Papaver somniferum HOM05D000247 ORTHO05D005467 3.0e-17 92.0 56 76.8
unitig_62.g23541 Utricularia gibba HOM05D000247 ORTHO05D005467 3.0e-17 92.0 84 59.5
Ah.04g159050 Amaranthus hybridus HOM05D000247 ORTHO05D005467 5.2e-17 91.3 57 77.2
EL10Ac4g09997 Beta vulgaris HOM05D000247 ORTHO05D005467 5.2e-17 91.3 55 78.2
BraA02t05322Z Brassica rapa HOM05D000247 ORTHO05D005467 5.2e-17 91.3 56 73.2
Lj1C578G15 Lonicera japonica HOM05D000247 ORTHO05D005467 5.2e-17 91.3 57 77.2
C02p08310 Brassica napus HOM05D000247 ORTHO05D005467 6.7e-17 90.9 56 73.2
BolC2t06751H Brassica oleracea HOM05D000247 ORTHO05D005467 6.7e-17 90.9 56 73.2
AUR62000296 Chenopodium quinoa HOM05D000247 ORTHO05D005467 8.8e-17 90.5 81 56.8
AUR62006642 Chenopodium quinoa HOM05D000247 ORTHO05D005467 8.8e-17 90.5 81 56.8
unitig_52.g17512 Utricularia gibba HOM05D000247 ORTHO05D005467 2.6e-16 89.0 84 57.1
SMO203G0060 Selaginella moellendorffii HOM05D000247 ORTHO05D005467 3.3e-16 88.6 66 66.7
CDE02G0703 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 5.7e-16 87.8 85 55.3
MELO3C029053.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.2e-15 85.9 43 100.0
Mapoly0040s0138 Marchantia polymorpha HOM05D000247 ORTHO05D005467 4.8e-15 84.7 54 74.1
Pp3c4_3890 Physcomitrium patens HOM05D000247 ORTHO05D005467 1.4e-14 83.2 56 67.9
Hund07358 Selenicereus undatus HOM05D000247 ORTHO05D005467 3.1e-14 82.0 56 69.6
MELO3C028554.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.0e-13 79.3 40 97.5
ECA238G1267 Erigeron canadensis HOM05D000261 ORTHO05D000566 4.7e-10 68.2 74 50.0
BcaC03g15161 Brassica carinata HOM05D000247 ORTHO05D005467 1.3e-07 60.1 40 70.0
arahy.Tifrunner.gnm1.ann1.IH0BTG Arachis hypogaea HOM05D000247 ORTHO05D000288 5.4e-06 54.7 100 34.0
AagrBONN_evm.TU.Sc2ySwM_369.147 Anthoceros agrestis HOM05D000247 ORTHO05D005467 7.0e-06 54.3 60 45.0
Cre05.g243050 Chlamydomonas reinhardtii HOM05D000247 ORTHO05D005467 7.0e-06 54.3 53 47.2


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