Gene: AT5G16400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G16400
  • Transcript Identifier AT5G16400.1
  • Gene Type Coding gene
  • Location Chr5 : 5363905-5365249 : negative

Gene Family Information

  • ID HOM05D000247
  • #Genes/#Species 1709/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G16400.1
  • symbol TRXF2
  • Alias ATF2
  • uniprot Q9XFH9

Descriptions

  • Description thioredoxin F2
  • Computational description thioredoxin F2 (TRXF2); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin F-type 1 (TAIR:AT3G02730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043085
IDA
Gene Ontologypositive regulation of catalytic activity1
GO:0009642
IGI
Gene Ontologyresponse to light intensity2
GO:0045454
IGI
Gene Ontologycell redox homeostasis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008047
IDA
Gene Ontologyenzyme activator activity1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009534
IDA
Gene Ontologychloroplast thylakoid5
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009570
IDA
Gene Ontologychloroplast stroma5
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid6
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036249 Thioredoxin-like superfamily
IPR013766 Thioredoxin domain
Mapman id Description
10.4.3.1 Redox homeostasis.thiol-based redox regulation.thioredoxin activities.F-type thioredoxin