Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028654.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.2e-36 156.0 78 100.0
MELO3C027978.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.3e-35 152.5 78 96.2
MELO3C001225.2 Cucumis melo HOM05D000806 ORTHO05D002320 8.5e-35 149.8 76 96.1
Cpa.g.sc0.171 Carica papaya HOM05D000806 ORTHO05D002320 1.1e-29 132.9 78 84.6
Gorai.004G276900 Gossypium raimondii HOM05D000806 ORTHO05D002320 1.8e-29 132.1 78 83.3
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.4e-29 131.7 78 83.3
Gohir.A07G167012 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.4e-29 131.7 78 83.3
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 5.4e-29 130.6 78 83.3
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 9.1e-29 129.8 77 83.1
Lsat_1_v5_gn_8_144641 Lactuca sativa HOM05D000806 ORTHO05D002320 9.1e-29 129.8 74 85.1
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 2.0e-28 128.6 78 83.3
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 83.8
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 2.0e-28 128.6 74 85.1
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 3.5e-28 127.9 78 80.8
Lj1g0000993 Lotus japonicus HOM05D000806 ORTHO05D002320 5.9e-28 127.1 74 83.8
AUR62032522 Chenopodium quinoa HOM05D000806 ORTHO05D002320 7.7e-28 126.7 74 85.1
CAN.G1897.7 Capsicum annuum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 77 81.8
CAN.G3.25 Capsicum annuum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 77 81.8
CAN.G653.1 Capsicum annuum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 77 81.8
CAN.G793.44 Capsicum annuum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 77 81.8
CAN.G1012.2 Capsicum annuum HOM05D000806 ORTHO05D002320 1.3e-27 125.9 77 81.8
Cpa.g.sc120.42 Carica papaya HOM05D000806 ORTHO05D002320 1.7e-27 125.6 78 80.8
BcaC04g21638 Brassica carinata HOM05D000806 ORTHO05D002320 2.9e-27 124.8 78 82.1
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 2.9e-27 124.8 74 83.8
Eucgr.E02609 Eucalyptus grandis HOM05D000806 ORTHO05D002320 5.0e-27 124.0 72 84.7
RcHm_v2.0_Chr5g0042991 Rosa chinensis HOM05D000806 ORTHO05D002320 8.5e-27 123.2 73 83.6
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 8.5e-27 123.2 73 83.6
Nitab4.5_0009663g0040 Nicotiana tabacum HOM05D000806 ORTHO05D002320 1.5e-26 122.5 77 79.2
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 1.9e-26 122.1 78 78.2
Lalb_Chr23g0274531 Lupinus albus HOM05D000806 ORTHO05D002320 3.2e-26 121.3 74 79.7
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea HOM05D000806 ORTHO05D002320 7.2e-26 120.2 70 82.9
SGA_v2.0_scaffold255G45490 Striga asiatica HOM05D000806 ORTHO05D002320 9.4e-26 119.8 78 75.6
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.2e-25 119.4 74 81.1
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 2.1e-25 118.6 74 81.1
Gohir.D04G104048 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.7e-25 118.2 76 77.6
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.7e-25 117.5 78 74.4
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.7e-25 117.5 78 74.4
RcHm_v2.0_Chr6g0281341 Rosa chinensis HOM05D000806 ORTHO05D002320 8.0e-25 116.7 73 78.1
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.0e-24 116.3 74 79.7
Nitab4.5_0000138g0260 Nicotiana tabacum HOM05D000806 ORTHO05D002320 2.3e-24 115.2 75 74.7
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 6.8e-24 113.6 67 83.6
Lsat_1_v5_gn_7_98301 Lactuca sativa HOM05D000806 ORTHO05D002320 1.2e-23 112.8 74 75.7
Nn1g00306 Nelumbo nucifera HOM05D000806 ORTHO05D002320 1.3e-22 109.4 78 70.5
TPR.G16839 Trifolium pratense HOM05D000806 ORTHO05D002320 3.7e-22 107.8 74 73.0
Cc00_g01670 Coffea canephora HOM05D000806 ORTHO05D002320 4.9e-22 107.5 68 82.4
Cc11_g02210 Coffea canephora HOM05D000806 ORTHO05D002320 4.9e-22 107.5 68 82.4
Psat2g111000 Pisum sativum HOM05D000806 ORTHO05D002320 4.9e-22 107.5 74 70.3
HPP92_028392 Vanilla planifolia HOM05D000806 ORTHO05D002320 4.9e-22 107.5 70 75.7
HPP92_028399 Vanilla planifolia HOM05D000806 ORTHO05D002320 4.9e-22 107.5 70 75.7
HPP92_028409 Vanilla planifolia HOM05D000806 ORTHO05D002320 4.9e-22 107.5 70 75.7
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 8.3e-22 106.7 60 86.7
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 8.3e-22 106.7 60 86.7
ECA236G1817 Erigeron canadensis HOM05D000806 ORTHO05D000001 1.8e-21 105.5 60 85.0
Hma1.2p1_0861F.1_g229660 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.4e-21 105.1 61 82.0
Hma1.2p1_0861F.1_g229663 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.4e-21 105.1 61 82.0
Hma1.2p1_0861F.1_g229667 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.4e-21 105.1 61 82.0
Sed0009930 Sechium edule HOM05D000806 ORTHO05D002320 3.1e-21 104.8 78 70.5
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 4.1e-21 104.4 60 85.0
Psat0s1152g0040 Pisum sativum HOM05D000806 ORTHO05D002320 4.1e-21 104.4 70 72.9
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 9.1e-21 103.2 70 70.0
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 9.1e-21 103.2 70 70.0
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.2e-20 102.8 59 84.7
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.6e-20 102.4 65 80.0
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.6e-20 102.4 65 80.0
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.6e-20 102.4 62 80.6
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 4.5e-20 100.9 60 85.0
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 4.5e-20 100.9 60 85.0
AUR62006476 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.5e-20 100.9 60 85.0
AUR62042261 Chenopodium quinoa HOM05D000806 ORTHO05D002324 4.5e-20 100.9 60 85.0
Psat5g286240 Pisum sativum HOM05D000806 ORTHO05D002320 5.9e-20 100.5 70 68.6
Psat6g140480 Pisum sativum HOM05D000806 ORTHO05D002320 5.9e-20 100.5 70 70.0
Hund03831 Selenicereus undatus HOM05D000806 ORTHO05D002320 7.7e-20 100.1 77 66.2
Potri.005G150200 Populus trichocarpa HOM05D000806 ORTHO05D002320 1.0e-19 99.8 69 73.9
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.3e-19 99.4 59 84.7
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.3e-19 99.4 59 84.7
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.3e-19 99.4 56 87.5
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.3e-19 99.4 56 87.5
Hma1.2p1_0861F.1_g229661 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.7e-19 99.0 54 87.0
Hma1.2p1_0861F.1_g229662 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.7e-19 99.0 54 87.0
Hma1.2p1_0861F.1_g229665 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.7e-19 99.0 54 87.0
Hma1.2p1_0861F.1_g229669 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.7e-19 99.0 54 87.0
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 1.7e-19 99.0 68 69.1
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 2.3e-19 98.6 59 84.7
Hund07992 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund08809 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund19838 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund22772 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27485 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27570 Selenicereus undatus HOM05D000680 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27599 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27874 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27955 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund27977 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28101 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28473 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28492 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28511 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28624 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28670 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28738 Selenicereus undatus HOM05D000680 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28748 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund28838 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29142 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29363 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29462 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29637 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29805 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29828 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund29868 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30328 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30362 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30468 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30508 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30560 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Hund30896 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.3e-19 98.6 77 64.9
Prupe.7G029700 Prunus persica HOM05D000806 ORTHO05D002320 2.9e-19 98.2 57 86.0
Hund08023 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.9e-19 98.2 77 63.6
Hund27490 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.9e-19 98.2 77 64.9
AUR62041919 Chenopodium quinoa HOM05D000806 ORTHO05D002324 3.8e-19 97.8 60 83.3
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 5.0e-19 97.4 60 81.7
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.1e-18 96.3 60 81.7
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.5e-18 95.9 61 77.0
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 2.5e-18 95.1 74 64.9
Psat0s1586g0240 Pisum sativum HOM05D000806 ORTHO05D002320 2.5e-18 95.1 74 63.5
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 2.5e-18 95.1 59 79.7
EL10As12g24027 Beta vulgaris HOM05D000806 ORTHO05D002320 4.2e-18 94.4 53 88.7
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.2e-18 94.4 59 79.7
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 5.5e-18 94.0 68 67.6
Hund22639 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.6e-17 92.4 66 72.7
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 2.3e-16 88.6 53 75.5
BNapus_Darmor_BZH_scaffold_253p00210 Brassica napus HOM05D000806 ORTHO05D002320 5.2e-16 87.4 59 78.0
Peaxi162Scf00021g00819 Petunia axillaris HOM05D000806 ORTHO05D002320 8.9e-16 86.7 68 67.6
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 7.5e-15 83.6 47 87.2
SEGI_26932 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 1.3e-14 82.8 68 57.4
SEGI_31685 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 2.2e-14 82.0 68 57.4
CARHR116860 Cardamine hirsuta HOM05D000806 ORTHO05D002320 3.7e-14 81.3 60 68.3
SMO364G0525 Selaginella moellendorffii HOM05D000806 ORTHO05D002320 1.1e-13 79.7 70 55.7
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.1e-13 79.7 73 57.5
vmacro13611 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 3.2e-13 78.2 68 55.9
Cre12.g484000 Chlamydomonas reinhardtii HOM05D000806 ORTHO05D002320 9.2e-13 76.6 70 51.4
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.6e-12 75.9 46 80.4
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.9e-10 68.9 44 77.3
Lsat_1_v5_gn_9_98941 Lactuca sativa HOM05D000806 ORTHO05D002320 1.9e-10 68.9 39 84.6
MD02G1049400 Malus domestica HOM05D000806 ORTHO05D002320 9.5e-10 66.6 38 86.8
Hund01487 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.6e-09 65.9 66 54.5
VMungo0251G1963 Vigna mungo HOM05D000806 ORTHO05D010715 3.6e-09 64.7 36 86.1
Solyc04g039820.3 Solanum lycopersicum HOM05D000806 ORTHO05D002320 1.4e-08 62.8 34 85.3
Nn3g19983 Nelumbo nucifera HOM05D000806 ORTHO05D002320 8.9e-08 60.1 49 63.3
EL10As5g23489 Beta vulgaris HOM05D002547 ORTHO05D002649 2.0e-07 58.9 33 84.8
Phvul.006G066900 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 2.0e-07 58.9 40 72.5
Lalb_Chr11g0071601 Lupinus albus HOM05D000806 ORTHO05D002320 2.6e-07 58.5 31 87.1
arahy.Tifrunner.gnm1.ann1.AG95Q9 Arachis hypogaea HOM05D000806 ORTHO05D002320 9.8e-07 56.6 35 74.3
Hund04050 Selenicereus undatus HOM05D000806 ORTHO05D002320 4.9e-06 54.3 37 73.0


User provided reference genes

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