Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 8.3e-70 266.9 135 100.0
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 9.6e-34 147.1 79 97.5
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 9.6e-34 147.1 79 97.5
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 1.1e-32 143.7 79 93.7
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 2.0e-31 139.4 79 89.9
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 5.6e-26 121.3 79 77.2
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 9.6e-26 120.6 79 74.7
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 1.6e-25 119.8 79 78.5
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 1.6e-25 119.8 79 74.7
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 2.1e-25 119.4 79 75.9
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 3.6e-25 118.6 79 75.9
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 3.6e-25 118.6 79 73.4
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 4.8e-25 118.2 79 74.7
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 6.2e-25 117.9 79 74.7
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 6.2e-25 117.9 79 74.7
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 6.2e-25 117.9 74 78.4
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 6.2e-25 117.9 79 73.4
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 8.1e-25 117.5 79 73.4
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 1.1e-24 117.1 79 73.4
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 1.1e-24 117.1 79 73.4
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 1.1e-24 117.1 79 74.7
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 1.4e-24 116.7 79 74.7
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 1.8e-24 116.3 79 73.4
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.8e-24 116.3 79 74.7
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.8e-24 116.3 79 73.4
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 2.4e-24 115.9 79 74.7
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 2.4e-24 115.9 79 69.6
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 2.4e-24 115.9 79 72.2
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 2.4e-24 115.9 79 73.4
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 3.1e-24 115.5 77 71.4
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 4.0e-24 115.2 79 73.4
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 4.0e-24 115.2 79 73.4
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 5.3e-24 114.8 78 73.1
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 5.3e-24 114.8 79 68.4
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 5.3e-24 114.8 79 68.4
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 5.3e-24 114.8 79 68.4
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 6.9e-24 114.4 79 65.8
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 6.9e-24 114.4 78 73.1
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 6.9e-24 114.4 79 69.6
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 9.0e-24 114.0 79 74.7
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 9.0e-24 114.0 79 72.2
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 9.0e-24 114.0 79 70.9
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 9.0e-24 114.0 79 67.1
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.2e-23 113.6 79 74.7
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 1.5e-23 113.2 79 68.4
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 2.0e-23 112.8 79 74.7
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 2.0e-23 112.8 79 69.6
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.0e-23 112.8 79 70.9
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.0e-23 112.8 79 70.9
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 2.0e-23 112.8 79 69.6
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 2.6e-23 112.5 79 69.6
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.6e-23 112.5 79 69.6
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.6e-23 112.5 79 73.4
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 3.4e-23 112.1 79 72.2
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 3.4e-23 112.1 79 70.9
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 3.4e-23 112.1 79 70.9
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 3.4e-23 112.1 79 69.6
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 4.5e-23 111.7 79 65.8
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 4.5e-23 111.7 79 69.6
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 5.8e-23 111.3 79 69.6
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 5.8e-23 111.3 79 69.6
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 5.8e-23 111.3 79 69.6
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 5.8e-23 111.3 79 69.6
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 7.6e-23 110.9 79 68.4
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 9.9e-23 110.5 79 68.4
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 1.3e-22 110.2 79 69.6
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.7e-22 109.8 79 68.4
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 1.7e-22 109.8 79 68.4
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.7e-22 109.8 78 69.2
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.2e-22 109.4 79 68.4
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 2.9e-22 109.0 119 52.9
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.9e-22 109.0 79 69.6
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 2.9e-22 109.0 79 69.6
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.8e-22 108.6 79 68.4
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 4.9e-22 108.2 79 67.1
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 6.4e-22 107.8 79 69.6
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 6.4e-22 107.8 79 69.6
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 6.4e-22 107.8 79 69.6
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 6.4e-22 107.8 79 69.6
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 6.4e-22 107.8 79 67.1
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 65.8
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 68.4
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 69.6
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 69.6
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 8.4e-22 107.5 76 69.7
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 67.1
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 8.4e-22 107.5 79 65.8
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 1.1e-21 107.1 79 72.2
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.1e-21 107.1 79 65.8
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 1.4e-21 106.7 79 68.4
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 1.4e-21 106.7 69 76.8
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 1.4e-21 106.7 77 70.1
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 2.4e-21 105.9 79 68.4
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 2.4e-21 105.9 85 62.4
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 2.4e-21 105.9 78 66.7
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 3.2e-21 105.5 79 68.4
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 3.2e-21 105.5 79 68.4
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 4.2e-21 105.1 78 67.9
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 4.2e-21 105.1 76 67.1
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 4.2e-21 105.1 76 67.1
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 5.4e-21 104.8 78 69.2
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 9.3e-21 104.0 76 65.8
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 9.3e-21 104.0 78 66.7
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 9.3e-21 104.0 79 63.3
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-20 103.2 89 61.8
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 2.1e-20 102.8 79 67.1
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.3e-19 100.1 79 65.8
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 2.3e-19 99.4 69 69.6
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 7.4e-18 94.4 81 63.0
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.6e-17 93.2 79 62.0
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 3.6e-17 92.0 79 62.0
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.8e-17 91.7 57 73.7
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.8e-17 91.7 81 56.8
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.8e-17 91.7 81 59.3
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.8e-17 91.7 81 59.3
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 1.4e-16 90.1 59 72.9
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 4.0e-16 88.6 56 75.0
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 1.2e-15 87.0 57 75.4
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.9e-14 82.4 79 51.9
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 3.8e-14 82.0 81 51.9
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 9.3e-13 77.4 87 47.1
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 1.2e-12 77.0 81 50.6
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 1.3e-11 73.6 73 47.9
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 4.3e-10 68.6 79 50.6
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 4.3e-10 68.6 79 50.6
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 2.1e-09 66.2 77 50.6
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 1.4e-08 63.5 56 53.6
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 7.6e-07 57.8 58 53.4


User provided reference genes

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