Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028166.2 Cucumis melo HOM05D004674 ORTHO05D029175 7.4e-08 58.9 29 100.0
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
MELO3C001880.2 Cucumis melo HOM05D004674 ORTHO05D029175 2.1e-07 57.4 29 96.6
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 2.1e-07 57.4 29 96.6
MELO3C028263.2 Cucumis melo HOM05D004674 ORTHO05D029175 2.1e-07 57.4 29 96.6
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 2.1e-07 57.4 29 96.6
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 2.8e-07 57.0 29 93.1
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 3.7e-07 56.6 29 93.1
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 4.8e-07 56.2 29 93.1
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 6.2e-07 55.8 29 89.7
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 8.1e-07 55.5 29 86.2
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 8.1e-07 55.5 29 89.7
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 8.1e-07 55.5 29 89.7
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 1.1e-06 55.1 29 89.7
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 1.1e-06 55.1 29 89.7
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.1e-06 55.1 29 89.7
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 1.1e-06 55.1 29 89.7
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 1.1e-06 55.1 29 93.1
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.4e-06 54.7 29 86.2
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 1.4e-06 54.7 29 86.2
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.4e-06 54.7 29 86.2
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 1.4e-06 54.7 29 86.2
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 1.8e-06 54.3 29 93.1
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 2.4e-06 53.9 29 82.8
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 2.4e-06 53.9 29 86.2
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.0e-06 53.1 28 92.9
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 5.3e-06 52.8 29 82.8
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 5.3e-06 52.8 29 82.8
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 5.3e-06 52.8 29 89.7
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 6.9e-06 52.4 29 82.8


User provided reference genes

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