Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027980.2 Cucumis melo HOM05D000247 ORTHO05D005467 5.2e-78 294.3 145 100.0
MELO3C029465.2 Cucumis melo HOM05D000247 ORTHO05D005467 4.0e-46 188.3 124 79.0
MELO3C032626.2 Cucumis melo HOM05D013600 ORTHO05D005467 5.6e-40 167.9 125 75.2
MELO3C031393.2 Cucumis melo HOM05D005653 ORTHO05D005467 8.4e-36 154.1 115 72.2
MELO3C035601.2 Cucumis melo HOM05D001347 ORTHO05D005467 8.4e-36 154.1 118 69.5
MELO3C029055.2 Cucumis melo HOM05D000247 ORTHO05D005467 1.1e-24 117.1 89 69.7
MELO3C028936.2 Cucumis melo HOM05D000247 ORTHO05D005467 2.5e-24 115.9 94 70.2
MELO3C010009.2 Cucumis melo HOM05D000247 ORTHO05D005467 3.3e-24 115.5 69 87.0
MELO3C034389.2 Cucumis melo HOM05D000247 ORTHO05D005467 4.3e-24 115.2 72 81.9
ClCG03G011670 Citrullus lanatus HOM05D000247 ORTHO05D005467 1.3e-23 113.6 69 85.5
Sed0000929 Sechium edule HOM05D000247 ORTHO05D005467 4.8e-23 111.7 69 82.6
CsaV3_1G044160 Cucumis sativus L. HOM05D000247 ORTHO05D005467 8.2e-23 110.9 69 84.1
Sed0017668 Sechium edule HOM05D000247 ORTHO05D005467 1.8e-22 109.8 69 79.7
TWI36G0515 Tripterygium wilfordii HOM05D000247 ORTHO05D005467 3.1e-22 109.0 56 92.9
Phvul.008G053300 Phaseolus vulgaris HOM05D000247 ORTHO05D005467 5.3e-22 108.2 70 81.4
Medtr7g080250 Medicago truncatula HOM05D000247 ORTHO05D005467 1.5e-21 106.7 69 79.7
TPR.G23770 Trifolium pratense HOM05D000247 ORTHO05D005467 1.5e-21 106.7 69 81.2
Actinidia06800 Actinidia chinensis HOM05D000247 ORTHO05D005467 3.4e-21 105.5 69 78.3
Lalb_Chr03g0038711 Lupinus albus HOM05D000247 ORTHO05D005467 3.4e-21 105.5 69 79.7
VMungo1383G3087 Vigna mungo HOM05D000247 ORTHO05D005467 3.4e-21 105.5 70 78.6
Actinidia03277 Actinidia chinensis HOM05D000247 ORTHO05D005467 4.5e-21 105.1 69 76.8
MD12G1263900 Malus domestica HOM05D000247 ORTHO05D005467 4.5e-21 105.1 69 79.7
Manes.13G004600 Manihot esculenta HOM05D000247 ORTHO05D005467 4.5e-21 105.1 69 78.3
Glyma.18G243200 Glycine max HOM05D000247 ORTHO05D005467 5.8e-21 104.8 69 79.7
Hma1.2p1_0609F.1_g188510 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 5.8e-21 104.8 70 78.6
Psat3g102640 Pisum sativum HOM05D000247 ORTHO05D005467 5.8e-21 104.8 56 92.9
vmacro19615 Vaccinium macrocarpon HOM05D000247 ORTHO05D005467 5.8e-21 104.8 70 77.1
arahy.Tifrunner.gnm1.ann1.2R4S5U Arachis hypogaea HOM05D000247 ORTHO05D005467 7.6e-21 104.4 69 78.3
arahy.Tifrunner.gnm1.ann1.MI3IQM Arachis hypogaea HOM05D000247 ORTHO05D005467 7.6e-21 104.4 69 78.3
CSS0010092 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D005467 7.6e-21 104.4 69 79.7
Cc09_g03800 Coffea canephora HOM05D000247 ORTHO05D005467 7.6e-21 104.4 69 76.8
Lalb_Chr01g0020531 Lupinus albus HOM05D000247 ORTHO05D005467 1.0e-20 104.0 56 91.1
PGR031G3232 Punica granatum HOM05D000247 ORTHO05D005467 1.0e-20 104.0 69 76.8
CiPaw.07G081500 Carya illinoinensis HOM05D000247 ORTHO05D005467 1.3e-20 103.6 69 78.3
Oeu034780.1 Olea europaea HOM05D000247 ORTHO05D005467 1.3e-20 103.6 70 75.7
Hma1.2p1_0609F.1_g188515 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 1.7e-20 103.2 57 89.5
Hma1.2p1_0609F.1_g188520 Hydrangea macrophylla HOM05D000247 ORTHO05D005467 1.7e-20 103.2 57 89.5
Atru.chr12.1750 Acer truncatum HOM05D000247 ORTHO05D005467 2.2e-20 102.8 69 76.8
Cfa006252 Carpinus fangiana HOM05D000247 ORTHO05D005467 2.2e-20 102.8 69 78.3
Haze_04582 Corylus avellana HOM05D000247 ORTHO05D005467 2.2e-20 102.8 69 78.3
Dinv15375 Davidia involucrata HOM05D000247 ORTHO05D005467 2.2e-20 102.8 70 75.7
MBI11_g00130_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D005467 2.2e-20 102.8 69 76.8
CDE05G1927 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 2.9e-20 102.4 69 72.5
Migut.F01866 Erythranthe guttata HOM05D000247 ORTHO05D005467 2.9e-20 102.4 56 89.3
Cpa.g.sc39.18 Carica papaya HOM05D000247 ORTHO05D005467 3.8e-20 102.1 69 76.8
Gohir.A13G114500 Gossypium hirsutum HOM05D000247 ORTHO05D005467 3.8e-20 102.1 74 71.6
Gohir.D13G117400 Gossypium hirsutum HOM05D000247 ORTHO05D005467 3.8e-20 102.1 74 71.6
Gorai.013G132000 Gossypium raimondii HOM05D000247 ORTHO05D005467 3.8e-20 102.1 74 71.6
CDE05G1910 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 4.9e-20 101.7 69 72.5
Thecc.05G192000 Theobroma cacao HOM05D000247 ORTHO05D005467 4.9e-20 101.7 69 76.8
TWI75G1857 Tripterygium wilfordii HOM05D000247 ORTHO05D005467 4.9e-20 101.7 56 85.7
Rhsim05G0167700 Rhododendron simsii HOM05D000247 ORTHO05D005467 6.5e-20 101.3 70 74.3
Duzib177G0105 Durio zibethinus HOM05D000247 ORTHO05D005467 8.4e-20 100.9 61 82.0
HanXRQChr17g0556061 Helianthus annuus HOM05D000247 ORTHO05D005467 8.4e-20 100.9 69 76.8
Lj1g0021551 Lotus japonicus HOM05D000247 ORTHO05D005467 8.4e-20 100.9 69 75.4
MD04G1246200 Malus domestica HOM05D000247 ORTHO05D005467 8.4e-20 100.9 69 76.8
GSVIVG01019070001 Vitis vinifera HOM05D000247 ORTHO05D005467 8.4e-20 100.9 69 76.8
Eucgr.B01424 Eucalyptus grandis HOM05D000247 ORTHO05D005467 1.1e-19 100.5 69 76.8
Rhsim10G0057900 Rhododendron simsii HOM05D000247 ORTHO05D005467 1.1e-19 100.5 70 74.3
COL.COLO4_33466 Corchorus olitorius HOM05D000247 ORTHO05D005467 1.4e-19 100.1 69 76.8
Migut.F02110 Erythranthe guttata HOM05D000247 ORTHO05D005467 1.4e-19 100.1 70 74.3
PSO170G0238 Papaver somniferum HOM05D000247 ORTHO05D005467 1.4e-19 100.1 71 71.8
SGA_v2.0_scaffold122G33187 Striga asiatica HOM05D000247 ORTHO05D005467 1.4e-19 100.1 69 76.8
Eucgr.H01629 Eucalyptus grandis HOM05D000247 ORTHO05D005467 1.9e-19 99.8 69 73.9
Nn3g20156 Nelumbo nucifera HOM05D000247 ORTHO05D005467 2.5e-19 99.4 70 71.4
SalBow6G2018 Salvia bowleyana HOM05D000247 ORTHO05D005467 2.5e-19 99.4 74 71.6
ATR0824G128 Amborella trichopoda HOM05D000247 ORTHO05D005467 3.2e-19 99.0 69 73.9
CANSAT54G0629 Cannabis sativa HOM05D000247 ORTHO05D005467 3.2e-19 99.0 69 76.8
PGR119G0647 Punica granatum HOM05D000247 ORTHO05D005467 4.2e-19 98.6 69 72.5
Sabra19G0063700 Salix brachista HOM05D000247 ORTHO05D005467 4.2e-19 98.6 57 86.0
HPP92_000446 Vanilla planifolia HOM05D000247 ORTHO05D005467 4.2e-19 98.6 69 75.4
Thhalv10014778m.g Eutrema salsugineum HOM05D000247 ORTHO05D005467 5.5e-19 98.2 69 72.5
Solyc05g056300.4 Solanum lycopersicum HOM05D000247 ORTHO05D005467 5.5e-19 98.2 69 73.9
Sopen05g034690 Solanum pennellii HOM05D000247 ORTHO05D005467 5.5e-19 98.2 69 73.9
PGSC0003DMG400023333 Solanum tuberosum HOM05D000247 ORTHO05D005467 5.5e-19 98.2 69 73.9
Zm00001eb418040 Zea mays HOM05D000247 ORTHO05D005467 5.5e-19 98.2 69 76.8
Aa31LG5G13200 Aethionema arabicum HOM05D000247 ORTHO05D005467 7.1e-19 97.8 69 72.5
AL3G12140 Arabidopsis lyrata HOM05D000247 ORTHO05D005467 7.1e-19 97.8 69 73.9
AT5G16400 Arabidopsis thaliana HOM05D000247 ORTHO05D005467 7.1e-19 97.8 69 72.5
Thhalv10021615m.g Eutrema salsugineum HOM05D000247 ORTHO05D005467 7.1e-19 97.8 69 73.9
AT3G02730 Arabidopsis thaliana HOM05D000247 ORTHO05D005467 9.3e-19 97.4 69 73.9
Carub.0003s0183 Capsella rubella HOM05D000247 ORTHO05D005467 9.3e-19 97.4 69 73.9
CAN.G1921.8 Capsicum annuum HOM05D000247 ORTHO05D005467 9.3e-19 97.4 69 73.9
RcHm_v2.0_Chr3g0447721 Rosa chinensis HOM05D000247 ORTHO05D005467 9.3e-19 97.4 56 85.7
Sp3g01760 Schrenkiella parvula HOM05D000247 ORTHO05D005467 9.3e-19 97.4 69 73.9
MSTRG.9245 Avicennia marina HOM05D000247 ORTHO05D005467 1.2e-18 97.1 74 67.6
Lsat_1_v5_gn_2_17480 Lactuca sativa HOM05D000247 ORTHO05D005467 1.2e-18 97.1 69 75.4
PSO357G0377 Papaver somniferum HOM05D000247 ORTHO05D005467 1.2e-18 97.1 71 69.0
Potri.019G054800 Populus trichocarpa HOM05D000247 ORTHO05D005467 1.6e-18 96.7 57 84.2
Prupe.6G362500 Prunus persica HOM05D000247 ORTHO05D005467 1.6e-18 96.7 70 75.7
Zm00001eb354270 Zea mays HOM05D000247 ORTHO05D005467 1.6e-18 96.7 69 75.4
AL6G27330 Arabidopsis lyrata HOM05D000247 ORTHO05D005467 2.1e-18 96.3 69 71.0
Carub.0006s1459 Capsella rubella HOM05D000247 ORTHO05D005467 2.1e-18 96.3 69 71.0
Ciclev10013409m.g Citrus clementina HOM05D000247 ORTHO05D005467 2.1e-18 96.3 69 72.5
Aqoxy5G00017 Aquilegia oxysepala HOM05D000247 ORTHO05D005467 2.7e-18 95.9 69 72.5
CARHR196860 Cardamine hirsuta HOM05D000247 ORTHO05D005467 2.7e-18 95.9 56 82.1
Sc09g0001410 Simmondsia chinensis HOM05D000247 ORTHO05D005467 2.7e-18 95.9 69 72.5
Lsat_1_v5_gn_0_10780 Lactuca sativa HOM05D000247 ORTHO05D005467 3.5e-18 95.5 70 68.6
Peaxi162Scf00353g00731 Petunia axillaris HOM05D000247 ORTHO05D005467 3.5e-18 95.5 70 70.0
THA.LOC104820923 Tarenaya hassleriana HOM05D000247 ORTHO05D005467 3.5e-18 95.5 69 71.0
Nitab4.5_0000582g0020 Nicotiana tabacum HOM05D000247 ORTHO05D005467 4.6e-18 95.1 70 70.0
Nitab4.5_0013647g0010 Nicotiana tabacum HOM05D000247 ORTHO05D005467 4.6e-18 95.1 70 70.0
A02p03510 Brassica napus HOM05D000247 ORTHO05D005467 6.0e-18 94.7 69 68.1
BraA01t04621Z Brassica rapa HOM05D000247 ORTHO05D005467 6.0e-18 94.7 69 71.0
HanXRQChr08g0220871 Helianthus annuus HOM05D000247 ORTHO05D005467 6.0e-18 94.7 56 83.9
Os01g0913000 Oryza sativa ssp. japonica HOM05D000247 ORTHO05D005467 6.0e-18 94.7 69 73.9
SalBow1G5091 Salvia bowleyana HOM05D000247 ORTHO05D005467 6.0e-18 94.7 69 71.0
BNapus_Darmor_BZH_scaffold_99p00230 Brassica napus HOM05D000247 ORTHO05D005467 7.9e-18 94.4 69 71.0
ECA232G0920 Erigeron canadensis HOM05D000247 ORTHO05D005467 1.0e-17 94.0 74 66.2
THA.LOC104802956 Tarenaya hassleriana HOM05D000247 ORTHO05D005467 1.0e-17 94.0 69 69.6
BraA02t05322Z Brassica rapa HOM05D000247 ORTHO05D005467 1.8e-17 93.2 69 66.7
Lj1C578G15 Lonicera japonica HOM05D000247 ORTHO05D005467 1.8e-17 93.2 70 70.0
Oeu009736.1 Olea europaea HOM05D000247 ORTHO05D005467 1.8e-17 93.2 70 68.6
unitig_62.g23541 Utricularia gibba HOM05D000247 ORTHO05D005467 1.8e-17 93.2 69 71.0
Ah.06g195420 Amaranthus hybridus HOM05D000247 ORTHO05D005467 2.3e-17 92.8 68 70.6
C02p08310 Brassica napus HOM05D000247 ORTHO05D005467 2.3e-17 92.8 69 66.7
BolC2t06751H Brassica oleracea HOM05D000247 ORTHO05D005467 2.3e-17 92.8 69 66.7
FvH4_6g00380 Fragaria vesca HOM05D000247 ORTHO05D005467 2.3e-17 92.8 57 84.2
FAN02G4262 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.3e-17 92.8 57 84.2
FAN09G0601 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.3e-17 92.8 57 84.2
FAN14G3072 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.3e-17 92.8 57 84.2
Sp6g27770 Schrenkiella parvula HOM05D000247 ORTHO05D005467 2.3e-17 92.8 69 66.7
BolC1t05881H Brassica oleracea HOM05D000247 ORTHO05D005467 3.0e-17 92.4 69 69.6
CDE06G0663 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 3.0e-17 92.4 70 68.6
Ah.04g159050 Amaranthus hybridus HOM05D000247 ORTHO05D005467 3.9e-17 92.0 68 70.6
EL10Ac4g09997 Beta vulgaris HOM05D000247 ORTHO05D005467 6.7e-17 91.3 68 69.1
A05p44370 Brassica napus HOM05D000247 ORTHO05D005467 6.7e-17 91.3 69 66.7
C09p75870 Brassica napus HOM05D000247 ORTHO05D005467 6.7e-17 91.3 69 66.7
BolC5t35070H Brassica oleracea HOM05D000247 ORTHO05D005467 6.7e-17 91.3 69 66.7
BraA06t23293Z Brassica rapa HOM05D000247 ORTHO05D005467 6.7e-17 91.3 69 66.7
unitig_52.g17512 Utricularia gibba HOM05D000247 ORTHO05D005467 1.5e-16 90.1 69 68.1
FAN05G0844 Fragaria x ananassa HOM05D000247 ORTHO05D005467 2.5e-16 89.4 57 80.7
BcaC05g30514 Brassica carinata HOM05D000247 ORTHO05D005467 3.3e-16 89.0 69 65.2
AUR62000296 Chenopodium quinoa HOM05D000247 ORTHO05D005467 3.3e-16 89.0 68 67.6
AUR62006642 Chenopodium quinoa HOM05D000247 ORTHO05D005467 3.3e-16 89.0 68 67.6
CDE02G0703 Ceratophyllum demersum HOM05D000247 ORTHO05D005467 7.4e-16 87.8 70 64.3
SMO203G0060 Selaginella moellendorffii HOM05D000247 ORTHO05D005467 9.7e-16 87.4 77 61.0
Pp3c4_3890 Physcomitrium patens HOM05D000247 ORTHO05D005467 8.2e-15 84.3 70 61.4
Mapoly0040s0138 Marchantia polymorpha HOM05D000247 ORTHO05D005467 1.4e-14 83.6 70 62.9
Hund07358 Selenicereus undatus HOM05D000247 ORTHO05D005467 2.4e-14 82.8 69 62.3
MELO3C034498.2 Cucumis melo HOM05D000247 ORTHO05D005467 1.5e-13 80.1 57 73.7
MELO3C028554.2 Cucumis melo HOM05D000247 ORTHO05D005467 3.4e-13 79.0 39 100.0
MELO3C033799.2 Cucumis melo HOM05D013600 ORTHO05D170344 3.4e-13 79.0 44 86.4
MELO3C029053.2 Cucumis melo HOM05D000247 ORTHO05D005467 4.5e-13 78.6 42 92.9
MELO3C029913.2 Cucumis melo HOM05D013600 ORTHO05D016905 4.2e-11 72.0 49 73.5
ECA238G1267 Erigeron canadensis HOM05D000261 ORTHO05D000566 3.9e-09 65.5 63 55.6
BcaC03g15161 Brassica carinata HOM05D000247 ORTHO05D005467 5.7e-08 61.6 40 72.5
MELO3C035106.2 Cucumis melo HOM05D013600 ORTHO05D016905 7.4e-08 61.2 32 90.6
Cre05.g243050 Chlamydomonas reinhardtii HOM05D000247 ORTHO05D005467 6.9e-06 54.7 53 47.2


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