Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027648.2 Cucumis melo HOM05D002824 ORTHO05D008771 2.1e-24 114.8 53 100.0
MELO3C027952.2 Cucumis melo HOM05D002824 ORTHO05D008771 2.1e-24 114.8 53 100.0
MELO3C032365.2 Cucumis melo HOM05D002824 ORTHO05D008771 3.3e-22 107.5 53 92.5
MELO3C030417.2 Cucumis melo HOM05D002824 ORTHO05D008771 7.3e-22 106.3 53 92.5
MELO3C033566.2 Cucumis melo HOM05D002824 ORTHO05D008771 3.4e-19 97.4 53 79.2
Ah.10g028980 Amaranthus hybridus HOM05D000964 ORTHO05D001488 6.2e-13 76.6 61 72.1
Sc25g0002050 Simmondsia chinensis HOM05D000964 ORTHO05D001488 4.0e-12 73.9 61 70.5
Ah.10g027210 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.5e-11 72.0 61 70.5
Ah.10g027340 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.5e-11 72.0 61 70.5
Ah.10g027460 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.5e-11 72.0 61 70.5
EL10Ac5g11668 Beta vulgaris HOM05D002824 ORTHO05D008771 1.5e-11 72.0 61 70.5
PSO548G0003 Papaver somniferum HOM05D002824 ORTHO05D008771 7.6e-11 69.7 61 70.5
Sc16g0004450 Simmondsia chinensis HOM05D002824 ORTHO05D008771 1.7e-10 68.6 61 67.2
ClCG00G003150 Citrullus lanatus HOM05D002824 ORTHO05D008771 4.9e-10 67.0 62 54.8
HanXRQChr00c0394g0574551 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr00c0593g0576361 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr00c0925g0577891 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr01g0020221 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr04g0127491 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr05g0152571 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr10g0284381 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr10g0318061 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr11g0321091 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr11g0326961 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr12g0369851 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQChr15g0486561 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
HanXRQCPg0580181 Helianthus annuus HOM05D002824 ORTHO05D008771 6.4e-10 66.6 61 67.2
ClCG11G017170 Citrullus lanatus HOM05D002824 ORTHO05D008771 1.1e-09 65.9 30 93.3
DCAR_032520 Daucus carota HOM05D002824 ORTHO05D008771 1.9e-09 65.1 61 63.9
Sc20g0003000 Simmondsia chinensis HOM05D002824 ORTHO05D008771 4.2e-09 63.9 58 65.5
PGR042G2139 Punica granatum HOM05D002824 ORTHO05D008771 5.5e-09 63.5 61 62.3
Hma1.2p1_0818F.1_g223320 Hydrangea macrophylla HOM05D002824 ORTHO05D008771 1.2e-08 62.4 57 66.7
Eucgr.G00343 Eucalyptus grandis HOM05D002824 ORTHO05D008771 7.9e-08 59.7 61 57.4
Ciclev10022760m.g Citrus clementina HOM05D002824 ORTHO05D008771 3.9e-07 57.4 61 55.7
Manes.10G116800 Manihot esculenta HOM05D002824 ORTHO05D008771 3.9e-07 57.4 62 54.8
Oeu054718.1 Olea europaea HOM05D002824 ORTHO05D008771 6.7e-07 56.6 61 62.3
Manes.07G025200 Manihot esculenta HOM05D002824 ORTHO05D008771 8.7e-07 56.2 60 50.0
Thecc.03G290100 Theobroma cacao HOM05D002824 ORTHO05D008771 8.7e-07 56.2 59 50.8
Sabra06G0188500 Salix brachista HOM05D002824 ORTHO05D008771 1.1e-06 55.8 57 54.4
Gohir.A12G232300 Gossypium hirsutum HOM05D002824 ORTHO05D008771 1.5e-06 55.5 57 52.6
Gohir.D12G235100 Gossypium hirsutum HOM05D002824 ORTHO05D008771 1.5e-06 55.5 57 52.6
Gorai.008G251300 Gossypium raimondii HOM05D002824 ORTHO05D008771 1.5e-06 55.5 57 52.6
Potri.006G241100 Populus trichocarpa HOM05D002824 ORTHO05D008771 1.5e-06 55.5 57 52.6
Sed0016999 Sechium edule HOM05D002824 ORTHO05D008771 1.5e-06 55.5 63 55.6
Atru.chr9.2077 Acer truncatum HOM05D002824 ORTHO05D008771 1.9e-06 55.1 58 51.7
Atru.chr1.2540 Acer truncatum HOM05D002824 ORTHO05D008771 2.5e-06 54.7 58 50.0
Duzib084G0020 Durio zibethinus HOM05D002824 ORTHO05D008771 2.5e-06 54.7 59 49.2
Duzib205G1549 Durio zibethinus HOM05D002824 ORTHO05D008771 2.5e-06 54.7 59 49.2
Potri.018G038900 Populus trichocarpa HOM05D002824 ORTHO05D008771 2.5e-06 54.7 57 52.6
ClCG11G018100 Citrullus lanatus HOM05D002824 ORTHO05D008771 5.6e-06 53.5 63 54.0
Lj3g0012155 Lotus japonicus HOM05D002824 ORTHO05D008771 7.4e-06 53.1 55 56.4
Ca_24278_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 9.6e-06 52.8 55 54.5
FAN11G2965 Fragaria x ananassa HOM05D002824 ORTHO05D008771 9.6e-06 52.8 55 54.5
FAN21G0827 Fragaria x ananassa HOM05D002824 ORTHO05D008771 9.6e-06 52.8 55 54.5
Medtr8g061130 Medicago truncatula HOM05D002824 ORTHO05D008771 9.6e-06 52.8 55 54.5


User provided reference genes

Program Settings