Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027569.2 Cucumis melo HOM05D011664 ORTHO05D015088 1.3e-29 132.5 73 100.0
MELO3C027354.2 Cucumis melo HOM05D011664 ORTHO05D015088 6.3e-24 113.6 65 96.9
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 9.1e-23 109.8 68 86.8
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 9.1e-23 109.8 69 87.0
MELO3C028239.2 Cucumis melo HOM05D011664 ORTHO05D015088 1.9e-20 102.1 65 87.7
MELO3C000788.2 Cucumis melo HOM05D011664 ORTHO05D015088 5.5e-20 100.5 66 84.8
MELO3C032334.2 Cucumis melo HOM05D011664 ORTHO05D015088 5.5e-20 100.5 65 87.7
MELO3C027879.2 Cucumis melo HOM05D011664 ORTHO05D015088 7.2e-20 100.1 65 86.2
MELO3C028025.2 Cucumis melo HOM05D011664 ORTHO05D015088 7.2e-20 100.1 65 86.2
MELO3C028026.2 Cucumis melo HOM05D011664 ORTHO05D015088 7.2e-20 100.1 65 86.2
MELO3C027896.2 Cucumis melo HOM05D011664 ORTHO05D015088 9.5e-20 99.8 65 86.2
MELO3C027664.2 Cucumis melo HOM05D011664 ORTHO05D015088 2.3e-18 95.1 65 83.1
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 2.6e-17 91.7 64 73.4
MELO3C023092.2 Cucumis melo HOM05D011664 ORTHO05D015088 1.6e-14 82.4 63 71.4
CSS0041154 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 2.0e-09 65.5 63 55.6
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 2.0e-09 65.5 58 62.1
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 2.2e-08 62.0 55 61.8
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 2.9e-08 61.6 62 54.8
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 2.9e-08 61.6 55 58.2
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 4.9e-08 60.8 62 56.5
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 6.4e-08 60.5 58 50.0
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 6.4e-08 60.5 55 58.2
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 8.3e-08 60.1 58 56.9
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 8.3e-08 60.1 59 55.9
MELO3C029324.2 Cucumis melo HOM05D011664 ORTHO05D015088 8.3e-08 60.1 36 91.7
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 1.4e-07 59.3 60 53.3
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 1.9e-07 58.9 55 56.4
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 1.9e-07 58.9 58 53.4
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 1.9e-07 58.9 58 53.4
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.4e-07 58.5 62 54.8
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 2.4e-07 58.5 58 51.7
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 2.4e-07 58.5 58 51.7
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 4.1e-07 57.8 57 54.4
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 7.0e-07 57.0 43 65.1
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 7.0e-07 57.0 64 45.3
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 9.2e-07 56.6 58 55.2
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 9.2e-07 56.6 59 52.5
MELO3C034787.2 Cucumis melo HOM05D011664 ORTHO05D015088 1.2e-06 56.2 37 81.1
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 1.2e-06 56.2 55 54.5
HPP92_011330 Vanilla planifolia HOM05D003625 ORTHO05D004382 1.2e-06 56.2 53 58.5
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.6e-06 55.8 66 50.0
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 2.0e-06 55.5 62 50.0
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 2.7e-06 55.1 64 51.6
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 2.7e-06 55.1 66 50.0
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 3.5e-06 54.7 43 62.8
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 4.6e-06 54.3 59 49.2
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 6.0e-06 53.9 59 55.9
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 6.0e-06 53.9 43 65.1
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 6.0e-06 53.9 59 47.5
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 6.0e-06 53.9 73 43.8
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 7.8e-06 53.5 72 50.0
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 7.8e-06 53.5 65 50.8
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 7.8e-06 53.5 57 52.6


User provided reference genes

Program Settings