Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 7.7e-21 102.8 50 100.0
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 2.9e-20 100.9 49 100.0
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 2.5e-19 97.8 50 94.0
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 2.5e-19 97.8 50 94.0
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 4.2e-19 97.1 50 92.0
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 4.2e-19 97.1 50 92.0
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.2e-18 95.5 50 88.0
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.2e-18 95.5 50 92.0
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.6e-18 95.1 50 90.0
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.6e-18 95.1 50 90.0
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 1.6e-18 95.1 50 90.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 1.6e-18 95.1 50 92.0
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.1e-18 94.7 50 90.0
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 2.7e-18 94.4 50 88.0
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-18 94.0 50 90.0
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.6e-18 93.6 50 90.0
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 6.1e-18 93.2 50 86.0
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 6.1e-18 93.2 50 86.0
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 6.1e-18 93.2 50 88.0
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.9e-18 92.8 49 89.8
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 88.0
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 88.0
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 88.0
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 88.0
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 88.0
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 1.4e-17 92.0 50 84.0
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.8e-17 91.7 50 84.0
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.8e-17 91.7 50 88.0
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.8e-17 91.7 50 88.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-17 91.3 50 88.0
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-17 91.3 50 88.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-17 91.3 50 88.0
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-17 91.3 50 88.0
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 3.0e-17 90.9 49 89.8
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 3.0e-17 90.9 50 86.0
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.0e-17 90.9 50 86.0
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 3.9e-17 90.5 50 86.0
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 5.1e-17 90.1 50 86.0
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 6.7e-17 89.7 50 86.0
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 6.7e-17 89.7 50 86.0
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 8.8e-17 89.4 50 84.0
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.5e-16 88.6 50 84.0
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.5e-16 88.6 48 85.4
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 1.5e-16 88.6 50 82.0
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.5e-16 88.6 50 82.0
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 82.0
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-16 87.8 50 84.0
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 82.0
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 84.0
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 5.7e-16 86.7 50 80.0
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.4e-16 86.3 50 84.0
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 9.7e-16 85.9 50 78.0
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 2.2e-15 84.7 50 82.0
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 2.8e-15 84.3 50 82.0
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 2.8e-15 84.3 50 78.0
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 6.3e-15 83.2 50 80.0
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.4e-14 82.0 50 80.0
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-14 82.0 50 78.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.4e-14 82.0 50 82.0
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 2.4e-14 81.3 50 78.0
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 3.1e-14 80.9 50 80.0
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.5e-13 78.6 46 80.4
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 1.5e-13 78.6 41 90.2
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.0e-12 75.9 49 69.4
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.7e-12 75.1 42 78.6
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.2e-11 70.5 37 86.5
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-09 65.5 37 81.1
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 4.4e-08 60.5 33 87.9
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.7e-08 59.3 30 93.3
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.3e-07 58.9 50 64.0
Gorai.006G198900 Gossypium raimondii HOM05D005573 ORTHO05D007161 4.1e-06 53.9 33 66.7


User provided reference genes

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