Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 5.3e-201 704.1 351 100.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.9e-190 669.1 406 84.5
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.2e-166 588.2 351 86.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 2.7e-157 558.9 347 80.7
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.6e-155 552.4 347 80.1
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 7.5e-155 550.8 350 79.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 6.3e-154 547.7 350 78.0
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.4e-153 545.8 350 78.6
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 4.1e-153 545.0 352 77.3
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 7.0e-153 544.3 350 78.0
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 7.0e-153 544.3 354 76.8
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.9e-152 541.2 344 77.0
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 5.9e-152 541.2 350 77.4
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.3e-151 540.0 352 77.0
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.9e-151 538.9 348 77.6
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 8.5e-151 537.3 354 76.6
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.1e-150 537.0 356 76.1
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.9e-150 536.2 354 76.8
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.2e-150 535.4 351 75.2
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.2e-150 535.0 349 76.5
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 7.2e-150 534.3 354 76.8
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 9.4e-150 533.9 351 76.4
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 2.1e-149 532.7 351 76.6
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.1e-149 532.7 355 76.1
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 2.7e-149 532.3 354 77.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.7e-149 532.3 354 77.4
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 4.7e-149 531.6 350 76.9
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 4.7e-149 531.6 355 77.5
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.1e-149 531.2 358 74.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 6.1e-149 531.2 354 77.1
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.0e-148 530.4 350 76.0
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.4e-148 530.0 282 94.7
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.8e-148 529.6 354 75.1
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.8e-148 529.6 350 76.6
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.3e-148 529.3 346 76.6
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.0e-148 528.9 354 75.4
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.0e-148 528.5 343 77.8
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.0e-147 526.2 348 75.3
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.4e-147 525.4 349 75.9
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 7.5e-147 524.2 353 74.8
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 7.5e-147 524.2 348 75.9
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.7e-146 523.1 351 74.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 3.7e-146 521.9 353 73.7
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.4e-145 520.0 352 73.9
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.8e-145 519.6 362 73.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.8e-145 519.6 355 73.0
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 3.1e-145 518.8 356 73.0
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.2e-144 516.9 348 74.4
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.6e-144 516.5 326 78.2
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.7e-144 515.8 347 75.2
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.7e-143 513.1 349 74.8
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.9e-143 512.3 367 72.8
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 5.0e-143 511.5 356 72.8
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.6e-143 511.1 325 78.5
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.1e-142 510.4 348 73.3
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 3.3e-142 508.8 350 72.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.2e-142 508.4 353 72.5
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.5e-142 508.1 357 71.4
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.1e-141 506.1 350 72.3
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.1e-141 504.6 383 68.1
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.0e-140 503.8 354 71.8
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.3e-140 502.7 328 77.1
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.0e-139 499.6 357 71.4
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.6e-139 499.2 364 70.3
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 2.6e-139 499.2 328 76.5
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.4e-139 498.8 356 71.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 7.5e-139 497.7 344 72.4
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.7e-138 496.5 296 82.8
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 3.7e-138 495.4 352 70.7
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 4.9e-138 495.0 344 73.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.7e-136 489.2 325 74.8
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 2.7e-136 489.2 352 69.0
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.5e-136 488.8 349 71.3
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.5e-136 488.4 345 71.9
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.0e-135 487.3 342 72.2
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 5.0e-135 485.0 351 70.4
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 5.0e-135 485.0 353 68.8
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.5e-134 482.6 334 71.9
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.7e-133 478.4 334 72.5
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 8.0e-133 477.6 340 70.3
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.4e-132 476.9 357 68.3
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.3e-132 476.1 378 64.8
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.5e-131 473.4 326 73.3
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 2.6e-131 472.6 344 68.6
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 3.4e-131 472.2 372 65.9
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 3.4e-131 472.2 333 68.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-130 469.9 331 70.1
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 2.9e-130 469.2 327 71.9
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.9e-130 468.4 340 68.8
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.9e-129 466.5 328 70.7
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.2e-128 463.8 332 69.0
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.2e-128 463.8 345 67.5
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 2.0e-128 463.0 326 69.9
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 3.5e-128 462.2 326 69.6
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.7e-127 459.9 339 69.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.3e-127 459.5 332 71.7
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 2.3e-127 459.5 343 69.1
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 3.9e-127 458.8 326 69.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 5.0e-127 458.4 321 70.1
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 5.0e-127 458.4 325 69.8
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 5.0e-127 458.4 332 69.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 6.6e-127 458.0 324 69.4
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 8.6e-127 457.6 325 69.8
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-126 457.2 327 69.1
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.5e-126 456.8 335 69.0
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.9e-126 456.4 323 70.3
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 2.5e-126 456.1 321 72.3
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 3.3e-126 455.7 324 69.4
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 5.6e-126 454.9 325 69.5
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 9.5e-126 454.1 381 64.0
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.2e-125 453.8 352 68.2
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.6e-125 453.4 325 69.2
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.4e-124 450.3 347 67.1
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.4e-124 450.3 350 66.6
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-124 450.3 268 82.8
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.3e-124 449.5 326 69.3
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 4.0e-124 448.7 329 67.2
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 6.8e-124 448.0 330 67.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.3e-122 443.7 335 66.0
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.7e-122 443.4 358 62.3
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.9e-122 442.6 378 60.6
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 6.4e-122 441.4 331 67.1
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.2e-120 437.2 330 67.3
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.0e-120 434.9 311 70.7
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 3.0e-119 432.6 272 80.9
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.9e-118 429.9 331 66.8
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.1e-116 424.1 313 68.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.1e-116 422.5 330 64.5
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 9.9e-115 417.5 265 78.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-111 406.8 529 45.6
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.2e-106 389.8 351 57.0
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.5e-102 377.1 329 61.1
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.9e-98 362.8 226 78.3
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 5.4e-97 358.6 331 54.7
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.9e-89 333.6 279 62.4
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 5.4e-89 332.0 287 57.5
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 5.1e-87 325.5 224 73.2
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.3e-86 322.4 190 83.7
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 5.6e-86 322.0 243 65.8
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 7.6e-83 311.6 267 61.4
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 6.5e-82 308.5 202 74.8
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 5.7e-78 295.4 227 67.8
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 2.6e-75 286.6 163 87.1
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.8e-71 273.9 188 74.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 4.5e-67 259.2 374 42.0
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.6e-59 233.4 186 64.0
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.7e-59 231.9 161 68.9
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 7.7e-59 231.9 184 65.8
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 3.2e-57 226.5 214 56.1
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.2e-56 224.6 164 68.3
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 5.9e-51 205.7 276 44.6
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 5.0e-50 202.6 329 41.6
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 4.8e-45 186.0 197 51.8
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 4.1e-44 183.0 143 65.7
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 8.3e-37 158.7 115 68.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.6e-30 137.1 336 32.7
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 4.4e-30 136.3 380 32.9
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-26 124.4 63 95.2
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.8e-26 123.2 114 56.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 1.2e-24 118.2 285 31.9
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.8e-23 114.4 206 36.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.0e-18 98.6 66 68.2
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.3e-18 98.2 57 80.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.5e-17 92.0 56 80.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 4.7e-16 89.7 60 66.7
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.1e-15 87.0 87 52.9
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.5e-09 68.2 78 47.4


User provided reference genes

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