Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026070.2 Cucumis melo HOM05D005776 ORTHO05D007333 1.9e-83 312.4 153 100.0
MELO3C007510.2 Cucumis melo HOM05D005776 ORTHO05D007333 1.5e-46 189.9 162 68.5
CsaV3_6G042720 Cucumis sativus L. HOM05D005776 ORTHO05D007333 5.5e-46 188.0 156 68.6
ClCG01G016400 Citrullus lanatus HOM05D005776 ORTHO05D007333 1.4e-44 183.3 156 67.9
Sed0000268 Sechium edule HOM05D005776 ORTHO05D007333 6.3e-42 174.5 156 66.7
Hund05302 Selenicereus undatus HOM05D005776 ORTHO05D007333 8.6e-31 137.5 140 56.4
CSS0016523 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 1.5e-30 136.7 150 53.3
CSS0036517 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 1.5e-30 136.7 150 53.3
GSVIVG01003777001 Vitis vinifera HOM05D005776 ORTHO05D007333 1.5e-30 136.7 146 54.8
Gohir.D02G141600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 7.3e-30 134.4 140 55.7
Gorai.005G159700 Gossypium raimondii HOM05D005776 ORTHO05D007333 7.3e-30 134.4 140 55.7
Manes.12G094700 Manihot esculenta HOM05D005776 ORTHO05D007333 2.1e-29 132.9 140 53.6
Gohir.A03G118800 Gossypium hirsutum HOM05D005776 ORTHO05D007333 3.6e-29 132.1 140 55.0
Thecc.02G289200 Theobroma cacao HOM05D005776 ORTHO05D007333 3.6e-29 132.1 146 53.4
COL.COLO4_07276 Corchorus olitorius HOM05D005776 ORTHO05D007333 4.7e-29 131.7 146 54.1
Duzib251G0151 Durio zibethinus HOM05D005776 ORTHO05D007333 4.7e-29 131.7 146 53.4
Ah.10g034500 Amaranthus hybridus HOM05D000575 ORTHO05D004448 8.0e-29 131.0 146 52.7
Sabra07G0030000 Salix brachista HOM05D005776 ORTHO05D007333 1.4e-28 130.2 157 51.0
Cpa.g.sc15.62 Carica papaya HOM05D005776 ORTHO05D007333 2.3e-28 129.4 135 54.8
MD02G1158600 Malus domestica HOM05D005776 ORTHO05D007333 2.3e-28 129.4 145 53.8
MD15G1273400 Malus domestica HOM05D005776 ORTHO05D007333 2.3e-28 129.4 145 53.1
Hma1.2p1_0739F.1_g211300 Hydrangea macrophylla HOM05D005776 ORTHO05D007333 3.1e-28 129.0 131 55.7
AL7G14000 Arabidopsis lyrata HOM05D005776 ORTHO05D007333 4.0e-28 128.6 130 56.2
Carub.0007s0339 Capsella rubella HOM05D005776 ORTHO05D007333 5.2e-28 128.3 131 55.0
Prupe.7G145200 Prunus persica HOM05D005776 ORTHO05D007333 5.2e-28 128.3 145 53.8
EL10Ac2g03922 Beta vulgaris HOM05D005776 ORTHO05D007333 8.9e-28 127.5 140 53.6
Os03g0767500 Oryza sativa ssp. japonica HOM05D005776 ORTHO05D007333 8.9e-28 127.5 151 49.7
Potri.007G034400 Populus trichocarpa HOM05D005776 ORTHO05D007333 8.9e-28 127.5 158 50.0
Duzib268G1673 Durio zibethinus HOM05D005776 ORTHO05D007333 1.2e-27 127.1 146 52.1
THA.LOC104804218 Tarenaya hassleriana HOM05D005776 ORTHO05D007333 2.6e-27 125.9 142 53.5
A01p02000 Brassica napus HOM05D005776 ORTHO05D007333 3.4e-27 125.6 128 55.5
BraA01t00188Z Brassica rapa HOM05D005776 ORTHO05D007333 3.4e-27 125.6 128 55.5
CANSAT25G0990 Cannabis sativa HOM05D005776 ORTHO05D007333 4.4e-27 125.2 137 51.1
AUR62022050 Chenopodium quinoa HOM05D005776 ORTHO05D007333 4.4e-27 125.2 156 48.1
PSO541G0480 Papaver somniferum HOM05D001143 ORTHO05D007333 4.4e-27 125.2 154 49.4
Sp7g34590 Schrenkiella parvula HOM05D005776 ORTHO05D007333 4.4e-27 125.2 156 49.4
BcaNung03515 Brassica carinata HOM05D005776 ORTHO05D007333 5.8e-27 124.8 146 52.7
CiPaw.01G029000 Carya illinoinensis HOM05D005776 ORTHO05D007333 5.8e-27 124.8 147 52.4
Ciclev10026303m.g Citrus clementina HOM05D005776 ORTHO05D007333 5.8e-27 124.8 138 51.4
COL.COLO4_13087 Corchorus olitorius HOM05D005776 ORTHO05D007333 5.8e-27 124.8 146 52.1
FvH4_1g14520 Fragaria vesca HOM05D005776 ORTHO05D007333 5.8e-27 124.8 147 50.3
FAN26G3400 Fragaria x ananassa HOM05D005776 ORTHO05D007333 5.8e-27 124.8 147 50.3
FAN28G0587 Fragaria x ananassa HOM05D005776 ORTHO05D007333 5.8e-27 124.8 147 50.3
Lj4A136T80 Lonicera japonica HOM05D005776 ORTHO05D007333 5.8e-27 124.8 143 52.4
Oeu032924.1 Olea europaea HOM05D005776 ORTHO05D007333 5.8e-27 124.8 150 48.7
TWI09G1011 Tripterygium wilfordii HOM05D005776 ORTHO05D007333 5.8e-27 124.8 147 50.3
Actinidia12087 Actinidia chinensis HOM05D005776 ORTHO05D007333 7.5e-27 124.4 145 51.7
C01p02180 Brassica napus HOM05D005776 ORTHO05D007333 7.5e-27 124.4 128 54.7
BolC1t00210H Brassica oleracea HOM05D005776 ORTHO05D007333 7.5e-27 124.4 128 54.7
AUR62009176 Chenopodium quinoa HOM05D005776 ORTHO05D007333 7.5e-27 124.4 156 47.4
Thhalv10026051m.g Eutrema salsugineum HOM05D005776 ORTHO05D007333 7.5e-27 124.4 158 52.5
FAN19G1930 Fragaria x ananassa HOM05D005776 ORTHO05D007333 9.8e-27 124.0 147 50.3
SalBow1G0426 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.3e-26 123.6 149 49.7
SalBow1G6751 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.3e-26 123.6 149 49.7
CDE02G0814 Ceratophyllum demersum HOM05D005776 ORTHO05D007333 1.7e-26 123.2 156 47.4
Rhsim10G0126200 Rhododendron simsii HOM05D005776 ORTHO05D007333 1.7e-26 123.2 155 50.3
arahy.Tifrunner.gnm1.ann1.41BUH4 Arachis hypogaea HOM05D005776 ORTHO05D007333 2.2e-26 122.9 146 52.1
vmacro11025 Vaccinium macrocarpon HOM05D005776 ORTHO05D007333 2.2e-26 122.9 145 52.4
Cfa004232 Carpinus fangiana HOM05D005776 ORTHO05D007333 2.9e-26 122.5 145 51.0
MSTRG.3404 Avicennia marina HOM05D005776 ORTHO05D007333 3.7e-26 122.1 158 47.5
PSO675G1056 Papaver somniferum HOM05D005776 ORTHO05D007333 3.7e-26 122.1 154 48.7
Peaxi162Scf00235g00723 Petunia axillaris HOM05D005776 ORTHO05D007333 3.7e-26 122.1 149 49.0
Aqoxy6G00958 Aquilegia oxysepala HOM05D005776 ORTHO05D007333 4.9e-26 121.7 146 51.4
AT4G37200 Arabidopsis thaliana HOM05D005776 ORTHO05D007333 4.9e-26 121.7 122 55.7
Cfa017515 Carpinus fangiana HOM05D005776 ORTHO05D007333 4.9e-26 121.7 121 56.2
Zm00001eb213990 Zea mays HOM05D005776 ORTHO05D007333 4.9e-26 121.7 129 52.7
Haze_15167 Corylus avellana HOM05D005776 ORTHO05D007333 8.3e-26 120.9 145 51.0
FAN23G2656 Fragaria x ananassa HOM05D005776 ORTHO05D007333 8.3e-26 120.9 147 49.7
RcHm_v2.0_Chr2g0103261 Rosa chinensis HOM05D005776 ORTHO05D007333 8.3e-26 120.9 143 51.0
ECA246G4011 Erigeron canadensis HOM05D005776 ORTHO05D007333 1.1e-25 120.6 133 52.6
Lj2g0005971 Lotus japonicus HOM05D005776 ORTHO05D007333 1.1e-25 120.6 135 51.9
Lalb_Chr09g0333671 Lupinus albus HOM05D005776 ORTHO05D007333 1.1e-25 120.6 142 52.1
Nitab4.5_0000984g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 1.1e-25 120.6 156 48.7
Psat2g163800 Pisum sativum HOM05D005776 ORTHO05D007333 1.1e-25 120.6 138 52.9
Nitab4.5_0002826g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 1.4e-25 120.2 156 48.1
SGA_v2.0_scaffold10G05128 Striga asiatica HOM05D005776 ORTHO05D007333 1.4e-25 120.2 151 48.3
Migut.K00840 Erythranthe guttata HOM05D005776 ORTHO05D007333 1.9e-25 119.8 151 47.0
Lsat_1_v5_gn_3_94020 Lactuca sativa HOM05D005776 ORTHO05D007333 1.9e-25 119.8 157 48.4
MBI16_g29183_MAGBIO Magnolia biondii HOM05D005776 ORTHO05D007333 1.9e-25 119.8 134 50.0
unitig_578.g16073 Utricularia gibba HOM05D005776 ORTHO05D007333 1.9e-25 119.8 128 54.7
arahy.Tifrunner.gnm1.ann1.TE9NQ7 Arachis hypogaea HOM05D005776 ORTHO05D007333 2.4e-25 119.4 122 56.6
Phvul.002G023500 Phaseolus vulgaris HOM05D005776 ORTHO05D007333 2.4e-25 119.4 131 51.1
Glyma.01G182500 Glycine max HOM05D005776 ORTHO05D007333 3.2e-25 119.0 131 51.9
CAN.G337.59 Capsicum annuum HOM05D005776 ORTHO05D007333 4.1e-25 118.6 146 52.1
Ca_24808_v3 Cicer arietinum L. HOM05D005776 ORTHO05D007333 4.1e-25 118.6 129 51.2
PGR102G0103 Punica granatum HOM05D005776 ORTHO05D007333 4.1e-25 118.6 124 54.8
PGSC0003DMG400022206 Solanum tuberosum HOM05D005776 ORTHO05D007333 4.1e-25 118.6 147 50.3
Aa31LG6G13780 Aethionema arabicum HOM05D005776 ORTHO05D007333 5.4e-25 118.2 121 57.0
Cc07_g19620 Coffea canephora HOM05D005776 ORTHO05D007333 5.4e-25 118.2 143 50.3
TPR.G29855 Trifolium pratense HOM05D005776 ORTHO05D007333 5.4e-25 118.2 128 53.1
TAR628G1436 Trochodendron aralioides HOM05D005776 ORTHO05D007333 5.4e-25 118.2 140 49.3
VMungo1215G2372 Vigna mungo HOM05D005776 ORTHO05D007333 5.4e-25 118.2 119 55.5
Medtr5g018580 Medicago truncatula HOM05D005776 ORTHO05D007333 7.0e-25 117.9 150 50.0
QL06p044240 Quercus lobata HOM05D005776 ORTHO05D007333 9.2e-25 117.5 122 54.1
Sopen07g033140 Solanum pennellii HOM05D005776 ORTHO05D007333 1.2e-24 117.1 147 50.3
HPP92_012224 Vanilla planifolia HOM05D005776 ORTHO05D007333 1.2e-24 117.1 151 48.3
HanXRQChr12g0378471 Helianthus annuus HOM05D005776 ORTHO05D007333 2.7e-24 115.9 144 50.0
ATR0733G088 Amborella trichopoda HOM05D005776 ORTHO05D007333 3.5e-24 115.5 146 47.9
Solyc07g064940.3 Solanum lycopersicum HOM05D005776 ORTHO05D007333 3.5e-24 115.5 147 49.7
Eucgr.H01941 Eucalyptus grandis HOM05D005776 ORTHO05D007333 7.8e-24 114.4 145 49.7
Sc15g0005670 Simmondsia chinensis HOM05D005776 ORTHO05D007333 1.1e-20 104.0 68 75.0
Nn6g32162 Nelumbo nucifera HOM05D005776 ORTHO05D007333 2.3e-20 102.8 64 76.6
Glyma.11G060800 Glycine max HOM05D005776 ORTHO05D007333 3.1e-20 102.4 67 74.6
Gohir.A03G118600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 6.8e-20 101.3 68 75.0
MD17G1248400 Malus domestica HOM05D005776 ORTHO05D007333 3.4e-19 99.0 67 73.1
AagrBONN_evm.TU.Sc2ySwM_344.5430 Anthoceros agrestis HOM05D005776 ORTHO05D007333 3.2e-17 92.4 61 72.1
TAR625G0250 Trochodendron aralioides HOM05D005776 ORTHO05D007333 9.2e-17 90.9 64 71.9
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 1.6e-16 90.1 117 47.0
SMO329G0044 Selaginella moellendorffii HOM05D005776 ORTHO05D007333 2.7e-16 89.4 65 66.2
Mapoly0011s0067 Marchantia polymorpha HOM05D005776 ORTHO05D007333 3.5e-16 89.0 61 68.9
MCO15G478 Micromonas commoda HOM05D005776 ORTHO05D007333 1.5e-14 83.6 63 61.9
CBR_g30695 Chara braunii HOM05D005776 ORTHO05D007333 1.2e-13 80.5 134 38.8
CARHR245300 Cardamine hirsuta HOM05D005776 ORTHO05D007333 2.1e-13 79.7 88 51.1
Hma1.2p1_0739F.1_g211290 Hydrangea macrophylla HOM05D005776 ORTHO05D007333 2.8e-13 79.3 92 48.9
Atru.chr3.470 Acer truncatum HOM05D005776 ORTHO05D007333 5.8e-11 71.6 115 37.4
Cre17.g702150 Chlamydomonas reinhardtii HOM05D005776 ORTHO05D007333 5.8e-11 71.6 54 59.3
Gorai.005G159300 Gossypium raimondii HOM05D005776 ORTHO05D007333 6.4e-10 68.2 68 55.9
PRCOL_00004254 Prasinoderma coloniale HOM05D005776 ORTHO05D007333 6.4e-10 68.2 64 51.6
Gohir.D02G142060 Gossypium hirsutum HOM05D005776 ORTHO05D007333 1.1e-09 67.4 48 68.8
C01p10450 Brassica napus HOM05D005776 ORTHO05D007333 2.7e-08 62.8 82 47.6
CDE01G0348 Ceratophyllum demersum HOM05D001852 ORTHO05D001989 3.5e-08 62.4 43 74.4
CARHR245310 Cardamine hirsuta HOM05D005776 ORTHO05D007333 3.9e-07 58.9 39 69.2


User provided reference genes

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