Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 9.0e-184 646.7 317 100.0
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.3e-169 597.4 373 81.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 1.0e-166 590.1 375 80.8
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 2.0e-159 565.8 383 75.7
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.5e-157 559.7 368 76.9
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 5.9e-151 537.7 359 73.5
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 3.8e-150 535.0 359 74.4
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 8.5e-150 533.9 360 73.1
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.5e-149 532.3 360 73.9
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.6e-148 529.6 357 73.7
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.7e-148 528.1 364 72.0
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 6.1e-148 527.7 357 73.4
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 6.1e-148 527.7 357 73.4
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.0e-147 526.9 359 72.7
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.4e-147 526.6 361 72.3
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.8e-147 526.2 361 71.2
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 3.0e-147 525.4 362 70.7
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.0e-147 525.0 358 72.3
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 4.0e-147 525.0 358 72.3
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 6.8e-147 524.2 366 71.3
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 6.8e-147 524.2 357 72.0
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 8.8e-147 523.9 356 72.8
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 8.8e-147 523.9 359 72.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.2e-146 523.5 363 70.5
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.2e-146 523.5 360 72.5
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.2e-146 523.5 356 73.3
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.5e-146 523.1 362 72.1
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 3.4e-146 521.9 358 72.1
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 3.4e-146 521.9 359 71.9
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 4.4e-146 521.5 362 71.0
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 4.4e-146 521.5 362 71.0
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 4.4e-146 521.5 355 72.1
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 7.5e-146 520.8 364 71.2
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 7.5e-146 520.8 356 72.8
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 9.8e-146 520.4 353 71.1
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 9.8e-146 520.4 358 71.8
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.3e-145 520.0 358 72.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.3e-145 520.0 356 72.5
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.7e-145 519.6 358 71.2
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.7e-145 519.6 362 70.4
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.2e-145 519.2 360 70.3
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.2e-145 519.2 365 70.4
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 2.2e-145 519.2 362 71.5
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.8e-145 518.1 356 71.6
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 8.3e-145 517.3 362 70.2
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.1e-144 516.9 356 71.3
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.4e-144 516.5 363 70.5
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.4e-144 516.5 353 70.8
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.4e-144 516.5 359 71.6
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.8e-144 516.2 360 70.6
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.8e-144 516.2 359 71.0
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.8e-144 516.2 352 73.3
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 4.1e-144 515.0 360 70.6
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 5.4e-144 514.6 356 70.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 5.4e-144 514.6 356 71.3
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 5.4e-144 514.6 359 71.6
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 7.0e-144 514.2 363 70.0
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 9.1e-144 513.8 361 71.5
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.0e-143 512.7 354 71.5
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 2.7e-143 512.3 356 70.8
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 2.7e-143 512.3 359 70.5
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.5e-143 511.9 354 71.5
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 5.9e-143 511.1 386 66.6
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.9e-143 511.1 363 69.1
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 1.0e-142 510.4 356 71.1
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.2e-142 509.2 355 71.0
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 2.9e-142 508.8 361 69.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 2.9e-142 508.8 376 67.8
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.5e-141 506.5 359 69.9
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.9e-141 506.1 354 69.8
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.5e-141 505.8 354 71.2
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 2.5e-141 505.8 365 69.0
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.2e-141 505.0 357 69.2
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 7.2e-141 504.2 361 69.0
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 1.2e-140 503.4 351 69.5
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.6e-140 503.1 360 69.4
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 2.1e-140 502.7 363 67.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 2.7e-140 502.3 360 69.7
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.7e-140 501.5 366 67.2
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.4e-139 500.0 358 69.3
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 1.4e-139 500.0 350 70.0
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.8e-139 499.6 357 68.3
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 1.8e-139 499.6 353 68.6
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.3e-139 499.2 375 66.4
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.0e-139 498.8 375 66.9
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.5e-138 496.5 374 66.3
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.0e-138 496.1 353 70.0
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 4.4e-138 495.0 360 66.7
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 7.5e-138 494.2 363 67.2
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 7.5e-138 494.2 356 68.3
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.4e-136 490.0 359 67.4
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.1e-136 488.8 380 65.3
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.2e-135 486.9 388 63.7
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.7e-134 483.0 377 63.1
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.9e-134 482.3 368 66.3
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 5.0e-134 481.5 378 65.6
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 8.6e-134 480.7 355 66.2
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.5e-133 477.2 361 67.3
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 6.1e-132 474.6 358 66.5
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 8.0e-132 474.2 365 65.2
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.3e-131 472.6 365 64.7
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 5.2e-131 471.5 352 67.6
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 5.7e-130 468.0 357 66.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.7e-130 468.0 367 64.9
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 7.5e-130 467.6 358 66.2
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.7e-129 466.5 323 70.6
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 6.4e-129 464.5 400 61.0
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 5.9e-127 458.0 270 81.1
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 7.8e-127 457.6 274 78.5
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 7.8e-127 457.6 240 88.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 5.0e-126 454.9 365 64.4
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.1e-125 453.8 349 64.8
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.3e-125 452.2 368 64.1
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.6e-124 449.9 357 62.2
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.1e-124 449.5 351 63.0
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 6.2e-124 448.0 364 64.6
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.6e-122 442.6 358 61.5
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 7.5e-122 441.0 274 75.9
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.1e-120 437.2 344 62.2
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.1e-120 435.3 343 61.8
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 7.0e-120 434.5 381 59.1
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.6e-119 433.3 353 60.3
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.7e-118 429.9 359 62.4
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.5e-117 426.8 278 73.0
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.5e-117 424.1 270 74.8
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-116 423.3 356 61.5
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.1e-115 420.6 356 60.7
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.2e-114 417.2 427 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.9e-113 412.5 387 54.8
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-111 406.8 367 59.7
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.4e-107 393.7 355 54.9
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 5.4e-104 381.7 268 67.5
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.5e-101 373.6 263 67.7
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.3e-101 372.5 311 63.3
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.6e-100 369.0 330 54.2
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.9e-93 346.7 369 48.8
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 3.3e-93 345.9 716 33.9
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 1.3e-92 344.0 267 66.3
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.4e-88 329.7 315 54.9
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.1e-83 314.3 202 74.3
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.4e-80 303.1 294 55.8
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.3e-73 280.8 241 58.5
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.8e-70 270.4 338 47.3
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 2.0e-66 256.9 251 51.8
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 8.7e-62 241.5 216 55.6
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.5e-45 187.6 100 89.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 2.6e-45 186.8 121 78.5
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 8.2e-44 181.8 126 73.0
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 8.2e-44 181.8 123 75.6
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.8e-43 180.6 123 74.8
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.9e-42 175.6 101 84.2
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 8.5e-41 171.8 125 69.6
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.2e-37 161.4 98 76.5
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.0e-35 152.1 137 55.5
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 3.6e-31 139.8 126 57.9
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 4.8e-28 129.4 73 82.2
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.5e-24 117.9 69 81.2
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.4e-22 111.3 74 71.6
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 3.0e-22 110.2 69 76.8
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 6.8e-22 109.0 67 79.1
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.1e-19 101.7 66 72.7
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 1.7e-17 94.4 68 63.2
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.8e-17 93.2 61 72.1
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 5.0e-17 92.8 65 63.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 3.3e-16 90.1 131 45.8
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 7.3e-16 89.0 84 54.8
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 3.4e-13 80.1 49 71.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 1.3e-12 78.2 62 58.1
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.7e-12 76.6 63 60.3
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 2.5e-08 63.9 41 70.7
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 8.0e-07 58.9 31 87.1


User provided reference genes

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