Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.6e-241 839.0 403 100.0
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 5.7e-207 724.2 446 79.4
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 1.8e-189 666.0 436 75.5
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 4.2e-170 601.7 349 85.1
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 6.1e-153 544.7 445 60.9
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 5.4e-149 531.6 434 59.7
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 3.9e-147 525.4 439 58.3
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 8.6e-147 524.2 450 59.1
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 8.6e-147 524.2 451 58.5
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 7.3e-146 521.2 436 60.3
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 3.6e-145 518.8 438 57.1
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 4.7e-145 518.5 439 58.8
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 3.1e-144 515.8 439 59.7
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.5e-143 513.5 437 58.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 2.0e-143 513.1 440 58.0
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 3.4e-143 512.3 438 57.8
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 4.4e-143 511.9 457 57.5
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 5.8e-143 511.5 440 57.7
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 9.8e-143 510.8 440 56.4
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 3.7e-142 508.8 431 57.8
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 4.6e-140 501.9 441 56.9
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.3e-139 499.6 449 56.6
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 1.1e-138 497.3 437 57.7
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 2.5e-138 496.1 450 55.6
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 2.1e-137 493.0 446 55.4
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 4.7e-137 491.9 460 54.6
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 8.1e-137 491.1 459 55.1
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 1.8e-136 490.0 452 55.1
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 1.8e-136 490.0 461 56.0
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 9.8e-135 484.2 458 53.5
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 1.3e-134 483.8 459 54.7
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.3e-134 483.8 436 55.5
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 1.1e-133 480.7 434 55.5
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.9e-133 479.9 444 53.8
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 7.1e-133 478.0 437 54.9
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.5e-132 475.7 436 54.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 4.6e-132 475.3 442 55.9
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.0e-132 474.9 436 54.4
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 6.0e-132 474.9 504 50.6
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.7e-131 473.4 437 55.6
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 2.3e-131 473.0 443 53.5
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.5e-130 470.3 441 53.5
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 7.3e-130 468.0 435 54.3
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 7.3e-130 468.0 444 54.1
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 9.5e-130 467.6 469 53.1
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.1e-129 466.5 456 52.6
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 8.1e-129 464.5 437 52.6
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 1.1e-128 464.2 445 51.7
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.4e-128 463.8 437 52.9
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 3.1e-128 462.6 440 53.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 3.1e-128 462.6 443 52.8
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 3.1e-128 462.6 443 52.8
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 8.9e-128 461.1 441 54.0
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 1.5e-127 460.3 434 52.8
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 4.4e-127 458.8 438 53.0
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 7.6e-127 458.0 437 52.9
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 9.9e-127 457.6 439 52.8
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 1.7e-126 456.8 439 52.6
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 6.4e-126 454.9 435 52.4
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.1e-125 454.1 440 52.3
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 1.1e-125 454.1 476 52.1
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.1e-125 454.1 437 52.6
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.4e-125 453.8 444 52.7
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.4e-125 453.0 437 52.4
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.4e-125 453.0 437 52.4
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.1e-125 452.2 440 53.6
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 5.4e-125 451.8 439 51.5
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 7.1e-125 451.4 391 58.3
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.6e-124 450.3 448 52.5
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.7e-124 449.5 439 53.5
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 1.7e-123 446.8 446 51.3
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.0e-123 446.0 439 51.0
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 5.6e-122 441.8 469 50.3
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 1.6e-121 440.3 445 51.7
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.6e-121 440.3 397 57.7
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 4.7e-121 438.7 440 52.3
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 8.1e-121 438.0 475 48.4
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.1e-120 436.0 459 51.6
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 8.9e-120 434.5 459 51.9
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 1.2e-119 434.1 446 51.6
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 2.9e-118 429.5 436 51.1
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.8e-118 429.1 469 48.2
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.1e-117 427.6 444 50.9
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.1e-113 413.3 458 49.1
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 3.1e-112 409.5 478 45.4
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 1.5e-111 407.1 438 47.9
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.0e-111 406.8 449 49.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.4e-109 400.6 418 50.0
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.3e-106 389.4 442 47.3
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 7.4e-106 388.3 455 46.2
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 1.4e-104 384.0 388 52.3
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 2.6e-103 379.8 388 51.3
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 4.9e-102 375.6 332 55.1
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 2.3e-99 366.7 322 58.7
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 5.5e-93 345.5 365 47.9
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.1e-92 343.6 438 45.7
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.5e-92 342.8 344 52.9
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.5e-85 320.1 499 37.1
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.8e-80 303.9 441 39.2
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.9e-77 293.9 444 38.3
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.1e-72 276.6 472 35.2
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.0e-71 273.9 441 33.8
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.2e-70 270.4 388 42.0
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.1e-68 263.8 272 51.1
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 6.1e-68 262.3 402 37.8
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 7.0e-64 248.8 336 43.2
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 1.2e-55 221.5 228 47.4
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 7.5e-50 202.2 235 48.1
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.8e-35 154.5 471 25.7
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.6e-34 150.6 207 39.6
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 1.9e-29 134.4 251 33.9
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.6e-28 131.3 438 25.6
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.4e-27 128.3 120 57.5
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.2e-27 126.3 120 57.5
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 2.5e-21 107.5 110 52.7
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 7.8e-15 85.9 82 42.7
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.9e-13 81.3 370 23.8
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.3e-13 80.1 79 54.4
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 4.0e-11 73.6 74 51.4
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 9.9e-10 68.9 273 27.8
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.4e-08 65.1 80 46.2
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.4e-08 65.1 80 46.2
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 3.2e-08 63.9 130 33.8
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.7e-06 58.2 64 53.1
CiPaw.04G074200 Carya illinoinensis HOM05D006132 ORTHO05D007305 3.0e-06 57.4 78 39.7


User provided reference genes

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