Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020066.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.7e-54 215.7 106 100.0
MELO3C033059.2 Cucumis melo HOM05D000306 ORTHO05D005993 5.0e-46 187.6 105 88.6
MELO3C033088.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.8e-43 179.1 104 86.5
MELO3C034648.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.6e-39 166.0 105 80.0
MELO3C032402.2 Cucumis melo HOM05D000306 ORTHO05D005993 8.0e-36 153.7 85 89.4
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 1.4e-35 152.9 100 77.0
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.4e-35 152.9 91 84.6
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 2.6e-34 148.7 91 82.4
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 1.8e-32 142.5 91 79.1
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 4.6e-31 137.9 91 73.6
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 3.9e-30 134.8 101 69.3
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 5.0e-30 134.4 96 69.8
MELO3C031202.2 Cucumis melo HOM05D000306 ORTHO05D005993 6.6e-30 134.0 87 79.3
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 8.6e-30 133.7 91 71.4
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 1.1e-29 133.3 91 71.4
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 1.1e-29 133.3 92 69.6
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 1.1e-29 133.3 92 69.6
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.9e-29 132.5 96 64.6
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 4.3e-29 131.3 92 70.7
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 4.3e-29 131.3 92 69.6
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 4.3e-29 131.3 92 69.6
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 7.3e-29 130.6 92 66.3
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 9.5e-29 130.2 92 68.5
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 1.2e-28 129.8 92 68.5
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 1.2e-28 129.8 92 67.4
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 1.2e-28 129.8 91 68.1
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 1.2e-28 129.8 91 70.3
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 1.6e-28 129.4 91 68.1
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 2.1e-28 129.0 92 68.5
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 2.8e-28 128.6 91 69.2
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 2.8e-28 128.6 92 67.4
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 3.6e-28 128.3 96 66.7
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 4.7e-28 127.9 91 65.9
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 4.7e-28 127.9 92 66.3
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 4.7e-28 127.9 91 69.2
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 6.2e-28 127.5 85 72.9
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 8.0e-28 127.1 97 63.9
Haze_22118 Corylus avellana HOM05D000306 ORTHO05D005993 8.0e-28 127.1 113 59.3
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 8.0e-28 127.1 85 71.8
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 8.0e-28 127.1 85 71.8
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 1.0e-27 126.7 85 71.8
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 1.0e-27 126.7 91 68.1
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 1.4e-27 126.3 92 67.4
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 1.4e-27 126.3 92 67.4
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 2.3e-27 125.6 92 66.3
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 2.3e-27 125.6 92 64.1
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 2.3e-27 125.6 92 65.2
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 2.3e-27 125.6 91 64.8
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 3.1e-27 125.2 92 65.2
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 3.1e-27 125.2 91 67.0
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 4.0e-27 124.8 91 65.9
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 4.0e-27 124.8 92 65.2
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 5.2e-27 124.4 101 64.4
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 6.8e-27 124.0 92 65.2
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 8.9e-27 123.6 92 63.0
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 8.9e-27 123.6 96 63.5
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 1.2e-26 123.2 91 64.8
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 1.2e-26 123.2 92 64.1
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 1.2e-26 123.2 85 72.9
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 1.5e-26 122.9 92 63.0
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 1.5e-26 122.9 92 64.1
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 1.5e-26 122.9 92 63.0
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 2.0e-26 122.5 92 64.1
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 2.0e-26 122.5 92 64.1
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 2.0e-26 122.5 101 59.4
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 2.0e-26 122.5 91 64.8
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 2.0e-26 122.5 92 65.2
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 2.6e-26 122.1 96 62.5
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 2.6e-26 122.1 91 65.9
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 2.6e-26 122.1 91 63.7
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 3.4e-26 121.7 92 65.2
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 3.4e-26 121.7 91 63.7
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 4.4e-26 121.3 92 65.2
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 4.4e-26 121.3 92 65.2
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 4.4e-26 121.3 92 62.0
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 4.4e-26 121.3 96 63.5
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 5.8e-26 120.9 92 63.0
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 5.8e-26 120.9 91 63.7
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 7.5e-26 120.6 92 64.1
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 7.5e-26 120.6 91 64.8
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 7.5e-26 120.6 91 64.8
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 7.5e-26 120.6 92 64.1
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 9.8e-26 120.2 102 61.8
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 9.8e-26 120.2 92 63.0
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 1.3e-25 119.8 92 63.0
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 1.3e-25 119.8 91 63.7
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 1.7e-25 119.4 91 62.6
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 1.7e-25 119.4 90 63.3
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 2.9e-25 118.6 92 62.0
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 2.9e-25 118.6 92 62.0
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 3.7e-25 118.2 92 63.0
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 1.1e-24 116.7 91 60.4
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 1.4e-24 116.3 92 62.0
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 3.2e-24 115.2 92 59.8
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 3.2e-24 115.2 96 56.2
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 7.0e-24 114.0 92 58.7
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 7.0e-24 114.0 92 58.7
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 9.2e-24 113.6 94 58.5
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 9.2e-24 113.6 91 63.7
Cc06_g13470 Coffea canephora HOM05D000306 ORTHO05D005993 9.2e-24 113.6 92 57.6
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 7.8e-23 110.5 92 56.5
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 1.7e-22 109.4 92 55.4
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 8.1e-20 100.5 89 53.9
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 5.2e-19 97.8 92 50.0
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 1.2e-18 96.7 86 52.3
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 2.9e-17 92.0 92 48.9
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 1.0e-14 83.6 77 48.1
CSS0049760 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 1.9e-13 79.3 44 79.5
Cfa024735 Carpinus fangiana HOM05D000306 ORTHO05D005993 4.3e-13 78.2 70 55.7
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 8.1e-12 73.9 84 46.4
MELO3C027570.2 Cucumis melo HOM05D000306 ORTHO05D005993 8.4e-09 63.9 41 80.5
CSS0029448 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 1.1e-08 63.5 51 58.8
arahy.Tifrunner.gnm1.ann1.46R2K9 Arachis hypogaea HOM05D000306 ORTHO05D083075 4.6e-07 58.2 45 57.8


User provided reference genes

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