Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019268.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.5e-31 137.5 62 100.0
MELO3C035680.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.5e-21 105.5 61 77.0
MELO3C027743.2 Cucumis melo HOM05D001651 ORTHO05D009716 3.3e-21 104.4 61 77.0
MELO3C032240.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.3e-21 104.0 61 77.0
MELO3C032742.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.3e-21 104.0 61 77.0
MELO3C033417.2 Cucumis melo HOM05D001651 ORTHO05D009716 2.1e-20 101.7 61 75.4
MELO3C035642.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.1e-20 101.7 61 75.4
MELO3C008748.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.7e-20 100.5 61 72.1
MELO3C028082.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.7e-20 100.5 61 75.4
MELO3C033398.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.2e-20 100.1 59 76.3
MELO3C028435.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-19 99.0 61 63.9
MELO3C035126.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.1e-19 97.8 61 63.9
MELO3C028011.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.2e-19 97.1 61 72.1
MELO3C029855.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.2e-19 97.1 61 62.3
MELO3C032180.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.8e-19 96.7 61 63.9
MELO3C032644.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.8e-19 96.7 61 72.1
MELO3C033199.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.5e-18 95.5 61 62.3
MELO3C030223.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.4e-18 94.4 56 71.4
MELO3C033868.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.4e-18 94.4 61 60.7
MELO3C032022.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.4e-18 94.0 61 60.7
MELO3C013181.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.8e-18 93.6 61 68.9
MELO3C032795.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.8e-18 93.6 59 66.1
MELO3C019088.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.5e-18 93.2 59 66.1
MELO3C016511.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.8e-18 92.8 61 72.1
MELO3C032494.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.8e-18 92.8 61 60.7
MELO3C035605.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.8e-18 92.8 61 72.1
MELO3C030820.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-17 92.4 59 62.7
MELO3C033738.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-17 92.4 61 67.2
MELO3C035564.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-17 92.0 61 59.0
MELO3C027597.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.2e-17 91.7 59 64.4
CsaV3_5G027450 Cucumis sativus L. HOM05D000034 ORTHO05D000277 2.9e-17 91.3 61 60.7
MELO3C029116.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-17 90.9 61 60.7
MELO3C032220.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-17 90.9 61 67.2
MELO3C029625.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.4e-17 90.1 61 67.2
MELO3C002895.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.3e-17 89.7 61 60.7
MELO3C030947.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.3e-17 89.7 61 60.7
MELO3C033795.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.3e-17 89.7 61 67.2
MELO3C034777.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.3e-17 89.7 61 70.5
MELO3C029869.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-16 89.4 61 67.2
MELO3C031993.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.4e-16 88.2 61 65.6
MELO3C032206.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.4e-16 88.2 61 70.5
MELO3C029074.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.0e-16 86.7 61 68.9
MELO3C030692.2 Cucumis melo HOM05D000034 ORTHO05D000037 7.0e-16 86.7 61 65.6
MELO3C023134.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-15 85.9 59 64.4
MELO3C031509.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.0e-15 85.1 61 62.3
MELO3C033016.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.0e-15 85.1 61 63.9
MELO3C033492.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.0e-15 85.1 58 62.1
MELO3C035618.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.0e-15 85.1 61 67.2
MELO3C034529.2 Cucumis melo HOM05D000034 ORTHO05D000037 3.5e-15 84.3 60 70.0
MELO3C029612.2 Cucumis melo HOM05D000034 ORTHO05D000037 6.0e-15 83.6 61 63.9
MELO3C032606.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.8e-15 83.2 61 63.9
Sed0012349 Sechium edule HOM05D001651 ORTHO05D000277 3.0e-14 81.3 61 55.7
ClCG05G014710 Citrullus lanatus HOM05D001651 ORTHO05D000277 3.9e-14 80.9 59 54.2
MELO3C033877.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.9e-14 80.9 47 76.6
Sed0013653 Sechium edule HOM05D000034 ORTHO05D000277 3.9e-14 80.9 61 55.7
MELO3C033364.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.6e-14 79.7 49 73.5
MELO3C033441.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.6e-14 79.7 61 63.9
Sed0005563 Sechium edule HOM05D001651 ORTHO05D000277 1.1e-13 79.3 61 54.1
MELO3C033214.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.5e-13 78.2 48 70.8
MELO3C032596.2 Cucumis melo HOM05D001651 ORTHO05D000037 2.1e-12 75.1 43 69.8
MELO3C034483.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.8e-12 74.7 46 73.9
MELO3C033958.2 Cucumis melo HOM05D000034 ORTHO05D000037 4.7e-12 73.9 44 72.7
MELO3C029657.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-11 72.8 61 47.5
MELO3C023118.2 Cucumis melo HOM05D001651 ORTHO05D009716 2.3e-11 71.6 50 62.0
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 4.0e-11 70.9 52 50.0
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 6.8e-11 70.1 52 50.0
Thecc.05G132700 Theobroma cacao HOM05D001651 ORTHO05D000277 8.9e-11 69.7 61 41.0
MELO3C032758.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.4e-10 67.8 60 53.3
MELO3C029732.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.4e-10 67.4 59 47.5
MELO3C032654.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.4e-10 67.4 61 57.4
MELO3C034967.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.8e-10 67.0 100 42.0
arahy.Tifrunner.gnm1.ann1.E2D6CJ Arachis hypogaea HOM05D001651 ORTHO05D000277 1.3e-09 65.9 59 45.8
MELO3C029013.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-09 65.9 60 46.7
CANSAT80G1436 Cannabis sativa HOM05D001651 ORTHO05D000277 1.7e-09 65.5 52 48.1
Sed0003532 Sechium edule HOM05D001651 ORTHO05D000277 1.7e-09 65.5 52 53.8
Sed0024644 Sechium edule HOM05D002740 ORTHO05D003126 1.7e-09 65.5 62 48.4
COL.COLO4_20957 Corchorus olitorius HOM05D000034 ORTHO05D000277 2.2e-09 65.1 52 44.2
COL.COLO4_13230 Corchorus olitorius HOM05D000034 ORTHO05D000277 2.9e-09 64.7 52 44.2
arahy.Tifrunner.gnm1.ann1.CJLK9M Arachis hypogaea HOM05D000034 ORTHO05D000277 3.7e-09 64.3 58 44.8
CANSAT64G1414 Cannabis sativa HOM05D001651 ORTHO05D000277 3.7e-09 64.3 52 46.2
arahy.Tifrunner.gnm1.ann1.0QZ25Z Arachis hypogaea HOM05D001651 ORTHO05D000277 4.9e-09 63.9 58 44.8
arahy.Tifrunner.gnm1.ann1.3RQC98 Arachis hypogaea HOM05D001651 ORTHO05D000277 6.4e-09 63.5 58 44.8
arahy.Tifrunner.gnm1.ann1.4HXN36 Arachis hypogaea HOM05D001651 ORTHO05D000277 6.4e-09 63.5 58 44.8
arahy.Tifrunner.gnm1.ann1.5U3795 Arachis hypogaea HOM05D001651 ORTHO05D000277 6.4e-09 63.5 58 44.8
arahy.Tifrunner.gnm1.ann1.Q82TWL Arachis hypogaea HOM05D001651 ORTHO05D000277 8.3e-09 63.2 58 44.8
MELO3C026719.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-08 62.8 37 70.3
Sed0008442 Sechium edule HOM05D001651 ORTHO05D000277 1.1e-08 62.8 61 47.5
MELO3C025792.2 Cucumis melo HOM05D001651 ORTHO05D009716 1.4e-08 62.4 43 58.1
arahy.Tifrunner.gnm1.ann1.LUU7A8 Arachis hypogaea HOM05D001651 ORTHO05D000277 1.9e-08 62.0 50 50.0
arahy.Tifrunner.gnm1.ann1.VKU54N Arachis hypogaea HOM05D001651 ORTHO05D000277 1.9e-08 62.0 58 41.4
Sed0015712 Sechium edule HOM05D001651 ORTHO05D000277 1.9e-08 62.0 50 48.0
MELO3C030296.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.4e-08 61.6 42 64.3
MELO3C033629.2 Cucumis melo HOM05D001651 ORTHO05D009716 3.2e-08 61.2 37 64.9
MELO3C035327.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.2e-08 61.2 37 64.9
Dinv15457 Davidia involucrata HOM05D000603 ORTHO05D002962 3.2e-08 61.2 56 44.6
arahy.Tifrunner.gnm1.ann1.PCHE3H Arachis hypogaea HOM05D001651 ORTHO05D000277 4.1e-08 60.8 58 43.1
MELO3C033906.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.4e-08 60.5 38 71.1
arahy.Tifrunner.gnm1.ann1.M99WHW Arachis hypogaea HOM05D000034 ORTHO05D000277 7.1e-08 60.1 50 50.0
COL.COLO4_13231 Corchorus olitorius HOM05D001651 ORTHO05D000277 7.1e-08 60.1 52 40.4
MELO3C033170.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.1e-08 60.1 52 48.1
CANSAT56G0820 Cannabis sativa HOM05D001651 ORTHO05D000277 9.2e-08 59.7 53 45.3
MELO3C035147.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.2e-08 59.7 39 59.0
Medtr3g075160 Medicago truncatula HOM05D000034 ORTHO05D000277 1.2e-07 59.3 58 41.4
COL.COLO4_19702 Corchorus olitorius HOM05D000034 ORTHO05D000277 3.5e-07 57.8 58 39.7
TPR.G21616 Trifolium pratense HOM05D001651 ORTHO05D000277 3.5e-07 57.8 58 41.4
COL.COLO4_02750 Corchorus olitorius HOM05D000034 ORTHO05D000277 4.6e-07 57.4 52 40.4
COL.COLO4_36116 Corchorus olitorius HOM05D011723 ORTHO05D000277 4.6e-07 57.4 52 38.5
arahy.Tifrunner.gnm1.ann1.7ADW8G Arachis hypogaea HOM05D001651 ORTHO05D000277 6.0e-07 57.0 58 41.4
MELO3C029091.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.0e-07 57.0 30 73.3
ECA246G1567 Erigeron canadensis HOM05D000034 ORTHO05D000277 6.0e-07 57.0 53 43.4
arahy.Tifrunner.gnm1.ann1.BXGT6A Arachis hypogaea HOM05D001651 ORTHO05D000277 7.8e-07 56.6 58 41.4
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 7.8e-07 56.6 59 35.6
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 7.8e-07 56.6 59 35.6
MELO3C033188.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.0e-06 56.2 32 65.6
ClCG01G009760 Citrullus lanatus HOM05D061704 ORTHO05D000277 1.3e-06 55.8 52 48.1
ClCG03G012350 Citrullus lanatus HOM05D000034 ORTHO05D000277 1.3e-06 55.8 45 55.6
MELO3C035151.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-06 55.8 61 44.3
CsaV3_2G013960 Cucumis sativus L. HOM05D001651 ORTHO05D000277 1.3e-06 55.8 53 45.3
arahy.Tifrunner.gnm1.ann1.IP4QXJ Arachis hypogaea HOM05D001651 ORTHO05D000277 1.7e-06 55.5 50 46.0
COL.COLO4_28256 Corchorus olitorius HOM05D011723 ORTHO05D000277 1.7e-06 55.5 57 33.3
MELO3C027794.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-06 55.5 32 68.8
MELO3C028097.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-06 55.5 32 65.6
MELO3C028542.2 Cucumis melo HOM05D001966 ORTHO05D010610 1.7e-06 55.5 35 62.9
MELO3C035042.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-06 55.5 32 65.6
MELO3C028479.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.3e-06 55.1 37 59.5
MELO3C028975.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.3e-06 55.1 43 48.8
MELO3C033434.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.9e-06 54.3 46 45.7
MELO3C033818.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.9e-06 54.3 42 64.3
arahy.Tifrunner.gnm1.ann1.ZKDC23 Arachis hypogaea HOM05D001651 ORTHO05D000277 5.1e-06 53.9 54 42.6
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.1e-06 53.9 51 39.2
Hma1.2p1_1276F.1_g272080 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.1e-06 53.9 51 41.2
Medtr0697s0010 Medicago truncatula HOM05D000034 ORTHO05D000277 5.1e-06 53.9 56 39.3
CANSAT56G2768 Cannabis sativa HOM05D008011 ORTHO05D000277 6.6e-06 53.5 68 36.8
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.6e-06 53.5 51 39.2
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.6e-06 53.5 51 39.2
MELO3C030792.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.6e-06 53.1 28 82.1
Sopen01g043080 Solanum pennellii HOM05D008774 ORTHO05D010951 8.6e-06 53.1 58 41.4
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 8.6e-06 53.1 58 41.4
Sopen07g025790 Solanum pennellii HOM05D000034 ORTHO05D000037 8.6e-06 53.1 58 41.4
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 8.6e-06 53.1 58 41.4


User provided reference genes

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