Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 2.9e-244 848.2 444 100.0
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 4.3e-240 834.3 444 96.4
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 3.3e-224 781.6 413 93.7
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 7.9e-210 733.8 444 85.1
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 4.5e-197 691.4 414 82.1
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 5.5e-195 684.5 408 81.1
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.9e-193 678.3 414 80.4
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 8.2e-191 670.6 457 76.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 4.5e-189 664.8 414 78.7
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 4.5e-189 664.8 415 78.3
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.9e-188 662.1 411 79.8
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.5e-187 659.1 408 78.4
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 9.4e-187 657.1 432 77.3
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.2e-186 656.8 407 78.4
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.6e-186 656.4 407 78.4
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.0e-185 653.7 410 76.8
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.3e-185 652.5 408 78.2
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 5.1e-185 651.4 406 76.8
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 6.7e-185 651.0 408 76.7
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.5e-184 649.0 408 77.7
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 4.3e-184 648.3 408 76.0
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 5.7e-184 647.9 410 77.1
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 9.7e-184 647.1 410 75.6
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.3e-183 646.7 417 77.5
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 2.2e-183 646.0 418 76.8
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.8e-182 642.9 405 78.5
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 9.1e-182 640.6 408 74.0
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.2e-181 640.2 409 74.3
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 5.9e-181 637.9 405 74.3
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 7.7e-181 637.5 414 72.9
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.0e-180 637.1 418 75.8
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.0e-180 637.1 409 74.1
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.3e-180 636.7 413 73.6
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 6.5e-180 634.4 407 73.5
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.9e-179 632.9 408 75.0
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 4.7e-178 628.2 413 75.1
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.0e-177 627.1 407 75.9
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 1.7e-175 619.8 414 72.2
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 2.2e-175 619.4 410 74.1
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 8.2e-175 617.5 417 73.9
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 8.2e-175 617.5 417 73.9
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.9e-172 609.0 413 73.4
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.8e-172 608.6 408 71.8
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 5.0e-172 608.2 408 74.0
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 8.5e-172 607.4 459 70.4
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 2.5e-171 605.9 408 71.8
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 7.2e-171 604.4 411 72.7
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 3.0e-169 599.0 400 72.8
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.1e-168 597.0 408 71.3
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 5.3e-166 588.2 410 70.5
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.6e-165 586.6 418 69.1
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 7.7e-165 584.3 437 68.4
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.0e-164 583.9 438 67.6
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 2.5e-163 579.3 410 68.3
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 9.4e-163 577.4 411 67.4
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.0e-161 572.4 408 67.9
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 3.0e-161 572.4 402 68.7
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 5.2e-161 571.6 416 67.3
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.3e-159 567.0 407 68.1
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 4.1e-158 562.0 407 68.3
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 4.1e-158 562.0 443 65.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 4.5e-157 558.5 410 68.3
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.7e-156 556.6 401 68.3
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.7e-156 556.6 409 64.5
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 5.0e-156 555.1 377 72.4
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 6.5e-156 554.7 423 64.8
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.5e-155 553.5 403 67.2
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.9e-155 553.1 407 66.1
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.9e-155 553.1 400 68.2
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 6.1e-154 548.1 411 64.7
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 8.0e-154 547.7 408 64.5
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.0e-153 547.4 411 64.7
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.3e-153 546.2 408 64.5
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 3.0e-153 545.8 411 64.5
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 8.8e-153 544.3 411 64.2
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 8.8e-153 544.3 455 59.8
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 7.5e-152 541.2 408 63.7
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 4.8e-151 538.5 393 64.9
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.1e-150 537.3 413 65.6
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 3.1e-150 535.8 409 63.3
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 4.5e-149 531.9 408 63.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.8e-148 528.9 425 62.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 6.6e-148 528.1 392 63.8
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.4e-145 520.4 407 63.4
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.3e-145 519.6 408 64.2
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.0e-144 516.5 323 75.2
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.7e-143 513.5 347 71.2
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.2e-143 513.1 326 76.7
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.1e-142 510.8 331 72.8
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.1e-142 510.8 347 71.2
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 3.1e-142 509.2 434 60.1
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.5e-139 500.4 442 57.7
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.9e-139 500.0 473 53.9
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.9e-139 500.0 381 65.9
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.4e-136 489.2 369 63.4
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.0e-132 477.6 320 71.6
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 8.6e-132 474.6 404 56.9
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.5e-128 461.5 288 76.7
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 2.9e-127 459.5 416 56.7
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 6.0e-117 425.2 313 66.5
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.9e-110 403.7 367 55.0
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 3.9e-108 396.0 348 55.5
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.9e-107 393.7 414 51.4
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 4.3e-107 392.5 283 70.0
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 4.4e-104 382.5 298 67.1
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 7.6e-104 381.7 280 68.2
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.8e-98 363.2 294 58.5
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.4e-97 360.1 356 49.7
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 4.9e-95 352.4 354 50.3
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 7.9e-93 345.1 322 57.8
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.2e-90 335.5 366 49.7
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 9.0e-89 331.6 291 55.7
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 2.2e-87 327.0 326 54.9
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.8e-87 326.2 245 64.1
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 3.7e-82 309.7 218 70.6
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 4.6e-77 292.7 180 75.0
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.6e-74 284.3 261 52.1
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.1e-73 279.6 329 47.1
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.4e-70 271.2 160 80.0
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.9e-54 217.6 235 45.5
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.2e-54 216.9 175 61.1
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.8e-47 193.4 144 66.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 8.5e-47 192.2 116 78.4
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-46 191.4 122 74.6
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 3.8e-39 166.8 190 52.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.4e-38 162.2 282 35.1
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 6.1e-37 159.5 115 71.3
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 2.6e-19 100.9 195 34.9
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.3e-18 98.6 60 78.3
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 5.6e-14 83.2 58 67.2


User provided reference genes

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