Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 6.1e-235 817.0 382 100.0
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 1.8e-226 788.9 382 96.1
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 2.7e-214 748.4 382 91.4
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 2.2e-208 728.8 372 89.5
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 3.6e-195 684.9 374 82.6
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 3.5e-190 668.3 372 79.6
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 7.8e-190 667.2 372 80.1
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 1.5e-188 662.9 379 78.4
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.2e-187 659.8 372 79.3
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 1.6e-187 659.4 373 78.8
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.6e-187 659.4 373 80.2
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 2.1e-187 659.1 373 80.2
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 4.7e-187 657.9 373 79.6
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-186 656.8 373 78.3
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 2.3e-186 655.6 379 78.9
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 2.3e-186 655.6 373 78.6
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.8e-186 654.1 373 78.0
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 6.8e-186 654.1 373 78.8
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 1.2e-185 653.3 379 78.4
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 2.6e-185 652.1 379 78.4
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 5.8e-185 651.0 372 79.6
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 7.5e-185 650.6 368 78.3
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 9.8e-185 650.2 373 77.7
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 9.8e-185 650.2 372 79.3
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 2.2e-184 649.0 371 80.6
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 2.2e-184 649.0 371 78.4
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 4.9e-184 647.9 379 77.8
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 6.4e-184 647.5 374 77.3
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 6.4e-184 647.5 373 78.6
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 1.4e-183 646.4 370 77.0
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 5.4e-183 644.4 383 77.0
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 5.4e-183 644.4 373 75.9
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 7.0e-183 644.0 372 78.5
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 9.2e-183 643.7 373 78.6
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 1.6e-182 642.9 371 78.4
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 2.1e-182 642.5 371 77.6
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 2.7e-182 642.1 373 77.2
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 3.5e-182 641.7 373 76.9
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 3.5e-182 641.7 373 76.1
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 3.5e-182 641.7 379 77.3
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 7.8e-182 640.6 373 76.9
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 7.8e-182 640.6 371 78.4
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 7.8e-182 640.6 373 75.6
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 1.0e-181 640.2 370 77.0
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 1.0e-181 640.2 373 76.4
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 1.3e-181 639.8 371 77.4
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.3e-181 639.8 375 77.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 2.3e-181 639.0 373 77.7
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 6.6e-181 637.5 372 78.2
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.1e-180 636.7 372 76.3
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.3e-180 635.2 373 76.4
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 3.3e-180 635.2 372 77.4
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 3.3e-180 635.2 378 73.8
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 5.6e-180 634.4 373 76.4
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 5.6e-180 634.4 372 75.0
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 5.6e-180 634.4 372 77.4
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 5.6e-180 634.4 371 77.6
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 5.6e-180 634.4 380 74.5
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.2e-179 633.3 372 76.3
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.2e-179 633.3 392 73.5
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.8e-179 632.1 373 75.9
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 6.2e-179 630.9 374 76.2
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 8.1e-179 630.6 373 76.1
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 1.1e-178 630.2 375 76.8
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.4e-178 629.8 375 76.8
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 1.4e-178 629.8 372 76.3
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 8.9e-178 627.1 373 75.6
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 8.9e-178 627.1 378 73.3
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 2.0e-177 625.9 380 75.3
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 3.5e-174 615.1 370 75.4
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 6.0e-174 614.4 372 75.5
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 1.0e-173 613.6 374 74.9
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.3e-173 612.5 372 74.5
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 1.1e-172 610.1 372 72.3
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 1.1e-172 610.1 376 73.7
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 9.5e-172 607.1 372 74.2
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 8.1e-171 604.0 366 73.2
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 4.0e-170 601.7 370 72.4
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 8.9e-170 600.5 369 73.2
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 1.2e-169 600.1 375 72.8
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 2.0e-169 599.4 375 72.0
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 2.0e-169 599.4 424 67.5
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 2.6e-169 599.0 375 72.8
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 4.4e-169 598.2 372 72.3
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 9.9e-169 597.0 366 73.0
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 1.3e-168 596.7 368 71.7
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 2.9e-168 595.5 380 72.4
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 3.8e-168 595.1 367 73.0
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 4.9e-168 594.7 375 71.2
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 6.4e-168 594.3 357 73.9
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 8.4e-168 594.0 372 73.7
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 1.1e-167 593.6 367 73.0
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.4e-167 592.4 349 77.1
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 3.2e-167 592.0 376 71.8
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 3.2e-167 592.0 377 72.9
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 1.6e-166 589.7 366 73.0
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 3.5e-166 588.6 373 70.8
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 7.8e-166 587.4 401 67.3
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 1.7e-165 586.3 383 71.8
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 2.3e-165 585.9 454 62.1
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 6.6e-165 584.3 366 71.9
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 3.3e-164 582.0 346 74.9
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.1e-159 567.0 406 68.0
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 1.4e-159 566.6 403 66.0
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 5.4e-159 564.7 371 66.8
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 1.6e-158 563.1 361 70.6
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 7.8e-158 560.8 379 65.7
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 2.3e-157 559.3 367 70.3
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 3.3e-156 555.4 375 66.4
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 3.1e-154 548.9 371 67.1
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 2.2e-152 542.7 375 67.5
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 1.9e-151 539.7 308 78.9
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 1.3e-149 533.5 376 63.0
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 8.7e-149 530.8 374 65.0
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 3.3e-148 528.9 361 64.8
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 2.8e-147 525.8 367 64.3
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 9.3e-143 510.8 413 59.1
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.6e-142 510.0 293 76.1
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 2.5e-135 486.1 372 63.4
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.8e-131 472.6 390 58.7
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 2.5e-124 449.5 274 74.5
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 2.4e-114 416.4 382 55.2
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 4.5e-113 412.1 344 59.6
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.5e-103 379.8 219 75.8
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.8e-99 366.3 250 67.2
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.1e-98 362.5 222 73.0
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.0e-93 347.8 221 70.6
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.2e-91 340.1 382 46.3
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 5.9e-89 332.0 384 44.8
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 2.3e-88 330.1 403 44.2
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 8.6e-88 328.2 373 45.6
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.7e-83 313.9 220 65.0
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 8.0e-78 295.0 165 75.2
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 5.4e-74 282.3 170 73.5
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 1.3e-64 251.1 171 68.4
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 2.3e-48 197.2 474 29.5
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 9.9e-44 181.8 94 83.0
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.3e-35 154.8 134 60.4
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 3.0e-32 143.7 78 83.3
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 8.7e-32 142.1 95 68.4
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 2.5e-31 140.6 95 67.4
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 8.4e-27 125.6 92 63.0
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 3.2e-26 123.6 339 28.3
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 4.2e-18 96.7 163 37.4
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 1.1e-15 88.6 43 93.0
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 1.5e-15 88.2 62 66.1
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 5.7e-15 86.3 45 82.2
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.3e-14 85.1 46 82.6
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 1.5e-12 78.2 40 85.0
Cpa.g.c47417 Carica papaya HOM05D004692 ORTHO05D117256 8.2e-06 55.8 31 80.6


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