Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016933.2 Cucumis melo HOM05D000082 ORTHO05D007743 1.4e-105 386.3 199 100.0
CsaV3_4G036260 Cucumis sativus L. HOM05D000082 ORTHO05D007743 1.2e-80 303.5 192 81.8
ClCG05G015970 Citrullus lanatus HOM05D000082 ORTHO05D007743 2.1e-74 282.7 193 75.1
Sed0005903 Sechium edule HOM05D000082 ORTHO05D007743 2.8e-66 255.8 193 68.4
Ciclev10008969m.g Citrus clementina HOM05D000082 ORTHO05D007743 1.6e-53 213.4 195 55.4
Lj5g0022807 Lotus japonicus HOM05D000082 ORTHO05D007743 1.4e-52 210.3 191 59.7
TWI63G0835 Tripterygium wilfordii HOM05D000082 ORTHO05D007743 1.4e-52 210.3 189 59.3
arahy.Tifrunner.gnm1.ann1.GHB8SH Arachis hypogaea HOM05D000082 ORTHO05D007743 3.0e-52 209.1 192 58.9
arahy.Tifrunner.gnm1.ann1.9Z4RH8 Arachis hypogaea HOM05D000082 ORTHO05D007743 5.2e-52 208.4 192 58.9
Manes.16G088000 Manihot esculenta HOM05D000082 ORTHO05D007743 5.2e-52 208.4 193 57.5
VMungo0647G2039 Vigna mungo HOM05D000082 ORTHO05D007743 5.2e-52 208.4 192 59.4
Gohir.A06G081400 Gossypium hirsutum HOM05D000082 ORTHO05D007743 2.6e-51 206.1 191 58.1
Ca_13085_v3 Cicer arietinum L. HOM05D000082 ORTHO05D007743 3.3e-51 205.7 191 58.1
Glyma.14G105900 Glycine max HOM05D000082 ORTHO05D007743 3.3e-51 205.7 191 58.1
Lalb_Chr24g0393731 Lupinus albus HOM05D000082 ORTHO05D007743 4.4e-51 205.3 191 58.6
Glyma.17G220500 Glycine max HOM05D000082 ORTHO05D007743 5.7e-51 204.9 191 58.6
COL.COLO4_21172 Corchorus olitorius HOM05D000082 ORTHO05D007743 7.4e-51 204.5 191 57.6
Duzib150G1135 Durio zibethinus HOM05D000082 ORTHO05D007743 1.3e-50 203.8 191 57.1
TPR.G38904 Trifolium pratense HOM05D000082 ORTHO05D007743 1.7e-50 203.4 191 57.1
Gorai.010G094400 Gossypium raimondii HOM05D000082 ORTHO05D007743 2.8e-50 202.6 191 57.1
Atru.chr7.1811 Acer truncatum HOM05D000082 ORTHO05D007743 3.7e-50 202.2 188 55.3
Gohir.D06G081000 Gossypium hirsutum HOM05D000082 ORTHO05D007743 4.8e-50 201.8 191 56.5
Cfa017843 Carpinus fangiana HOM05D000082 ORTHO05D007743 8.2e-50 201.1 186 58.6
Phvul.001G043900 Phaseolus vulgaris HOM05D000082 ORTHO05D007743 1.1e-49 200.7 192 57.8
Thecc.09G066800 Theobroma cacao HOM05D000082 ORTHO05D007743 1.8e-49 199.9 191 56.0
Cpa.g.sc82.22 Carica papaya HOM05D000082 ORTHO05D007743 3.1e-49 199.1 192 54.7
Medtr1g014710 Medicago truncatula HOM05D000082 ORTHO05D007743 9.1e-49 197.6 191 56.0
Psat6g024320 Pisum sativum HOM05D000082 ORTHO05D007743 2.6e-48 196.1 191 56.0
PGR044G1353 Punica granatum HOM05D000082 ORTHO05D007743 3.5e-48 195.7 191 55.5
Migut.E01466 Erythranthe guttata HOM05D000082 ORTHO05D007743 1.7e-47 193.4 193 50.8
CANSAT25G3535 Cannabis sativa HOM05D000082 ORTHO05D007743 8.5e-47 191.0 200 52.5
CiPaw.16G071800 Carya illinoinensis HOM05D000082 ORTHO05D007743 1.5e-46 190.3 192 56.8
MD15G1046800 Malus domestica HOM05D000082 ORTHO05D007743 4.2e-46 188.7 188 53.7
Actinidia01322 Actinidia chinensis HOM05D000082 ORTHO05D007743 5.5e-46 188.3 191 52.4
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.6e-45 186.8 197 49.7
Sabra06G0167800 Salix brachista HOM05D000082 ORTHO05D007743 2.1e-45 186.4 194 54.1
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 2.7e-45 186.0 189 51.9
Rhsim12G0139000 Rhododendron simsii HOM05D000082 ORTHO05D007743 2.7e-45 186.0 186 52.7
Potri.006G217600 Populus trichocarpa HOM05D000082 ORTHO05D007743 3.6e-45 185.7 191 51.8
Haze_18365 Corylus avellana HOM05D000082 ORTHO05D007743 6.1e-45 184.9 190 54.7
CSS0031449 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D007743 2.3e-44 183.0 194 49.5
THA.LOC104810973 Tarenaya hassleriana HOM05D000082 ORTHO05D007743 4.0e-44 182.2 193 49.2
MD08G1045000 Malus domestica HOM05D000082 ORTHO05D007743 1.5e-43 180.3 177 54.2
Nitab4.5_0009154g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 1.5e-43 180.3 196 48.5
RcHm_v2.0_Chr6g0304721 Rosa chinensis HOM05D000082 ORTHO05D007743 2.0e-43 179.9 194 51.5
MSTRG.1634 Avicennia marina HOM05D000082 ORTHO05D007743 2.6e-43 179.5 191 50.3
Eucgr.C03179 Eucalyptus grandis HOM05D000082 ORTHO05D007743 3.3e-43 179.1 194 50.5
GSVIVG01035508001 Vitis vinifera HOM05D000082 ORTHO05D007743 4.4e-43 178.7 173 53.2
unitig_0.g2182 Utricularia gibba HOM05D000082 ORTHO05D007743 5.7e-43 178.3 193 50.8
Lsat_1_v5_gn_7_59260 Lactuca sativa HOM05D000082 ORTHO05D007743 2.2e-42 176.4 167 52.7
Sopen08g021220 Solanum pennellii HOM05D000082 ORTHO05D007743 6.3e-42 174.9 192 50.0
Hma1.2p1_0920F.1_g236580 Hydrangea macrophylla HOM05D000082 ORTHO05D007743 8.2e-42 174.5 196 48.5
Peaxi162Scf00922g00002 Petunia axillaris HOM05D000082 ORTHO05D007743 1.8e-41 173.3 190 50.0
Solyc08g067290.3 Solanum lycopersicum HOM05D000082 ORTHO05D007743 2.4e-41 172.9 192 49.5
PGSC0003DMG400007377 Solanum tuberosum HOM05D000082 ORTHO05D007743 2.4e-41 172.9 192 49.5
DCAR_004369 Daucus carota HOM05D000082 ORTHO05D007743 9.1e-41 171.0 188 51.1
vmacro16415 Vaccinium macrocarpon HOM05D000082 ORTHO05D007743 1.6e-40 170.2 170 53.5
Thhalv10014170m.g Eutrema salsugineum HOM05D000082 ORTHO05D007743 2.0e-40 169.9 191 49.2
HanXRQChr09g0248291 Helianthus annuus HOM05D000082 ORTHO05D007743 2.0e-40 169.9 155 56.1
MD08G1045700 Malus domestica HOM05D000082 ORTHO05D007743 5.9e-40 168.3 199 47.7
Sp6g23610 Schrenkiella parvula HOM05D000082 ORTHO05D007743 5.9e-40 168.3 191 48.2
CARHR191940 Cardamine hirsuta HOM05D000082 ORTHO05D007743 1.3e-39 167.2 191 47.6
MBI13_g01682_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D007743 1.7e-39 166.8 200 45.0
AT5G20910 Arabidopsis thaliana HOM05D000082 ORTHO05D007743 2.2e-39 166.4 191 48.7
A03p10340 Brassica napus HOM05D000278 ORTHO05D004673 2.2e-39 166.4 191 46.1
AL6G32470 Arabidopsis lyrata HOM05D000082 ORTHO05D007743 2.9e-39 166.0 191 48.2
PSO724G0255 Papaver somniferum HOM05D000082 ORTHO05D007743 2.9e-39 166.0 179 45.3
FvH4_2g37060 Fragaria vesca HOM05D000082 ORTHO05D007743 5.0e-39 165.2 191 47.1
Nn8g38527 Nelumbo nucifera HOM05D000082 ORTHO05D007743 5.0e-39 165.2 172 51.2
BcaNung05757 Brassica carinata HOM05D000082 ORTHO05D007743 6.5e-39 164.9 191 47.6
C03p11870 Brassica napus HOM05D000278 ORTHO05D004673 6.5e-39 164.9 191 47.6
TAR624G0119 Trochodendron aralioides HOM05D000082 ORTHO05D007743 9.4e-38 161.0 175 50.3
Carub.0006s1920 Capsella rubella HOM05D000082 ORTHO05D007743 1.6e-37 160.2 190 44.7
FAN06G3381 Fragaria x ananassa HOM05D000082 ORTHO05D007743 1.6e-37 160.2 191 46.1
FAN06G0753 Fragaria x ananassa HOM05D000082 ORTHO05D007743 2.1e-37 159.8 191 45.5
FAN25G1293 Fragaria x ananassa HOM05D000082 ORTHO05D007743 2.1e-37 159.8 191 46.1
Sc25g0004450 Simmondsia chinensis HOM05D000082 ORTHO05D007743 3.6e-37 159.1 198 44.9
Cc08_g07820 Coffea canephora HOM05D000082 ORTHO05D007743 6.1e-37 158.3 171 50.3
PSO135G0672 Papaver somniferum HOM05D000082 ORTHO05D007743 1.4e-36 157.1 183 43.7
Aqoxy7G04170 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 1.8e-36 156.8 197 43.7
FAN07G0416 Fragaria x ananassa HOM05D000116 ORTHO05D007743 3.0e-36 156.0 189 45.5
FAN21G0679 Fragaria x ananassa HOM05D000082 ORTHO05D007743 6.8e-36 154.8 191 45.0
FAN21G1538 Fragaria x ananassa HOM05D000082 ORTHO05D007743 1.2e-35 154.1 191 45.0
Aa31LG1G13850 Aethionema arabicum HOM05D000082 ORTHO05D007743 9.8e-35 151.0 192 46.4
ECA240G1377 Erigeron canadensis HOM05D000082 ORTHO05D007743 2.2e-34 149.8 149 53.0
HPP92_002370 Vanilla planifolia HOM05D000082 ORTHO05D007743 1.6e-32 143.7 208 42.3
HPP92_027597 Vanilla planifolia HOM05D000082 ORTHO05D007743 2.0e-32 143.3 208 42.3
EL10As3g23312 Beta vulgaris HOM05D000082 ORTHO05D007743 3.5e-32 142.5 167 46.1
Peaxi162Scf00251g00411 Petunia axillaris HOM05D000082 ORTHO05D007743 2.9e-31 139.4 179 44.7
AUR62038171 Chenopodium quinoa HOM05D000082 ORTHO05D007743 6.5e-31 138.3 188 42.6
Os09g0434200 Oryza sativa ssp. japonica HOM05D000082 ORTHO05D007743 6.5e-31 138.3 169 45.0
AUR62038076 Chenopodium quinoa HOM05D000082 ORTHO05D007743 1.1e-30 137.5 188 43.1
Lj7C205T1 Lonicera japonica HOM05D000082 ORTHO05D007743 2.1e-29 133.3 146 50.0
Nitab4.5_0015655g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 8.0e-29 131.3 148 46.6
SEGI_35365 Sequoiadendron giganteum HOM05D000082 ORTHO05D007743 4.0e-28 129.0 182 39.6
FAN10G1603 Fragaria x ananassa HOM05D000287 ORTHO05D007743 3.3e-22 109.4 114 47.4
FAN23G0804 Fragaria x ananassa HOM05D000082 ORTHO05D007743 8.0e-21 104.8 191 37.2
ATR0099G001 Amborella trichopoda HOM05D000082 ORTHO05D007743 1.0e-20 104.4 119 42.0
Zm00001eb099970 Zea mays HOM05D000082 ORTHO05D007743 3.0e-20 102.8 140 39.3
Dinv40948 Davidia involucrata HOM05D000082 ORTHO05D007743 4.0e-20 102.4 95 51.6
SMO011G0034 Selaginella moellendorffii HOM05D000082 ORTHO05D007743 2.0e-19 100.1 133 39.1
AagrBONN_evm.TU.Sc2ySwM_344.4009 Anthoceros agrestis HOM05D000082 ORTHO05D007743 4.4e-19 99.0 148 35.1
GSVIVG01035510001 Vitis vinifera HOM05D000082 ORTHO05D007743 5.7e-19 98.6 77 59.7
Mapoly0027s0101 Marchantia polymorpha HOM05D000082 ORTHO05D007743 4.9e-18 95.5 157 34.4
Pp3c1_42450 Physcomitrium patens HOM05D000082 ORTHO05D007743 1.8e-17 93.6 203 34.0
Aqoxy7G00970 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 7.8e-16 88.2 189 33.9
CBR_g17961 Chara braunii HOM05D000082 ORTHO05D007743 8.6e-15 84.7 147 34.7
AagrBONN_evm.TU.Sc2ySwM_344.4006 Anthoceros agrestis HOM05D000082 ORTHO05D007743 3.3e-14 82.8 144 29.9
C06p13820 Brassica napus HOM05D000082 ORTHO05D007743 4.0e-12 75.9 87 48.3
BcaC08g43979 Brassica carinata HOM05D000082 ORTHO05D007743 5.2e-12 75.5 104 43.3
Aqoxy1G01834 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 3.7e-10 69.3 139 32.4
Pp3c1_5780 Physcomitrium patens HOM05D000082 ORTHO05D310223 7.0e-09 65.1 100 33.0
A10p19130 Brassica napus HOM05D000082 ORTHO05D007743 6.0e-08 62.0 52 57.7
Pp3c2_5960 Physcomitrium patens HOM05D000082 ORTHO05D007743 1.0e-07 61.2 208 27.4
BcaC04g19487 Brassica carinata HOM05D000082 ORTHO05D007743 1.3e-07 60.8 53 54.7
C09p55200 Brassica napus HOM05D000082 ORTHO05D007743 1.7e-07 60.5 52 55.8
CDE06G2470 Ceratophyllum demersum HOM05D000082 ORTHO05D007743 5.6e-06 55.5 60 50.0


User provided reference genes

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