Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 0.0e+00 1384.4 691 100.0
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 0.0e+00 1284.6 695 92.8
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 4.1e-298 1027.7 694 75.8
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 4.6e-241 838.2 699 61.5
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 3.0e-240 835.5 706 60.3
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 3.4e-228 795.4 707 56.6
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 2.5e-226 789.3 705 57.4
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 7.9e-225 784.3 712 56.7
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 2.2e-222 776.2 727 56.0
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 2.8e-222 775.8 727 56.1
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 5.3e-221 771.5 704 56.5
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 9.0e-221 770.8 696 56.8
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 3.4e-220 768.8 704 56.5
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 8.5e-219 764.2 704 56.7
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.1e-218 763.8 706 55.8
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 9.3e-218 760.8 696 55.3
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 1.2e-217 760.4 696 54.9
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 1.6e-217 760.0 705 55.5
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 6.7e-216 754.6 710 54.8
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 2.8e-214 749.2 703 54.9
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 5.0e-211 738.4 708 55.1
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 8.5e-211 737.6 712 55.2
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 2.5e-210 736.1 706 54.4
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 9.4e-210 734.2 698 54.4
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 4.7e-209 731.9 703 54.5
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 7.4e-207 724.5 700 54.0
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.8e-205 719.9 703 53.6
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 6.9e-205 718.0 691 53.3
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 3.4e-204 715.7 698 53.2
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 5.0e-203 711.8 708 52.1
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 2.7e-201 706.1 700 51.9
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 6.3e-198 694.9 759 49.7
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 3.1e-197 692.6 696 50.9
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 4.1e-197 692.2 693 51.9
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 5.9e-196 688.3 715 50.5
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.7e-195 686.8 714 50.4
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 2.9e-195 686.0 691 51.8
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 3.6e-193 679.1 703 50.2
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 6.1e-193 678.3 702 49.7
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.3e-192 676.4 698 51.3
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 6.7e-192 674.9 609 58.5
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 2.0e-191 673.3 707 50.4
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 9.7e-191 671.0 702 49.4
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 1.7e-190 670.2 696 51.3
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.8e-190 669.5 658 53.6
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 8.2e-190 667.9 698 48.4
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.4e-189 667.2 698 50.4
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 4.1e-189 665.6 672 52.5
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 5.3e-189 665.2 709 49.4
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 1.2e-188 664.1 705 49.1
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 7.7e-188 661.4 691 49.6
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 1.1e-186 657.5 704 48.9
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 3.2e-186 656.0 708 48.9
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 3.6e-185 652.5 703 49.8
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 6.1e-185 651.7 708 49.6
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 3.4e-183 646.0 703 48.4
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 7.5e-183 644.8 706 48.3
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 4.8e-182 642.1 588 57.0
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 3.1e-181 639.4 694 49.3
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.2e-180 637.5 706 48.6
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 5.9e-180 635.2 712 47.1
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.9e-180 635.2 698 48.7
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 1.0e-179 634.4 705 47.7
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 1.0e-176 624.4 711 46.1
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 4.0e-176 622.5 675 49.5
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 8.3e-174 614.8 681 47.1
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.4e-173 612.1 734 45.6
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.0e-171 607.8 683 46.4
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 2.3e-171 606.7 699 46.4
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 5.0e-171 605.5 508 59.4
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.8e-165 587.0 700 46.3
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 2.5e-162 576.6 513 55.9
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 1.1e-160 571.2 703 43.5
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 5.2e-160 568.9 610 49.7
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 1.2e-159 567.8 695 44.3
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 2.6e-159 566.6 539 56.8
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 2.1e-153 547.0 459 59.5
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 5.1e-147 525.8 607 48.9
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 2.1e-145 520.4 513 50.5
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 5.2e-144 515.8 401 63.6
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 7.1e-141 505.4 552 48.7
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 9.2e-141 505.0 446 57.4
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 1.2e-140 504.6 446 57.2
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 1.2e-135 488.0 472 55.1
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 1.5e-135 487.6 640 45.0
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 2.9e-134 483.4 618 44.5
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.3e-131 473.8 529 49.5
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 9.0e-128 461.8 489 51.3
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 6.0e-124 449.1 444 54.1
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.5e-122 444.5 435 54.7
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 5.8e-119 432.6 546 42.7
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 5.9e-103 379.4 378 51.1
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 2.2e-102 377.5 503 41.9
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 6.1e-100 369.4 662 35.6
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 2.4e-88 330.9 769 30.6
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.6e-84 318.2 698 30.8
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 8.0e-84 315.8 589 34.0
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.9e-83 313.5 691 31.1
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 5.2e-83 313.2 691 31.1
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.7e-81 308.1 697 32.0
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 4.5e-79 300.1 721 29.0
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.0e-74 284.6 235 59.6
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.0e-70 272.3 416 38.0
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 6.8e-59 233.0 207 56.0
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 5.9e-55 219.9 186 56.5
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 5.9e-55 219.9 319 40.8
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 1.1e-48 199.1 218 49.5
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.1e-43 181.0 160 50.0
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 5.1e-38 163.7 131 56.5
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 1.1e-37 162.5 146 58.9
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 3.2e-32 144.4 146 50.0
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 6.0e-31 140.2 304 32.6
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 8.1e-28 129.8 204 37.7
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 3.2e-24 117.9 89 55.1
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 3.2e-24 117.9 238 37.0
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 3.5e-23 114.4 132 43.9
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 3.9e-22 110.9 189 38.6
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 2.1e-20 105.1 109 51.4
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 6.2e-20 103.6 246 29.7
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 1.2e-10 72.8 61 47.5
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 9.9e-10 69.7 43 67.4
CAN.G1175.3 Capsicum annuum HOM05D002159 ORTHO05D005625 2.2e-09 68.6 390 20.8
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.2e-09 68.6 59 47.5
Duzib205G0713 Durio zibethinus HOM05D002159 ORTHO05D005625 6.4e-09 67.0 475 19.6
PGR142G0288 Punica granatum HOM05D002159 ORTHO05D005625 6.4e-09 67.0 476 20.2
Eucgr.K00275 Eucalyptus grandis HOM05D002159 ORTHO05D005625 8.4e-09 66.6 481 21.4
Solyc03g025540.3 Solanum lycopersicum HOM05D002159 ORTHO05D005625 8.4e-09 66.6 386 21.0
Sopen03g004380 Solanum pennellii HOM05D002159 ORTHO05D005625 8.4e-09 66.6 386 21.0
COL.COLO4_28056 Corchorus olitorius HOM05D002159 ORTHO05D005625 1.1e-08 66.2 469 19.4
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.9e-08 65.5 394 20.6
Peaxi162Scf00444g00532 Petunia axillaris HOM05D002159 ORTHO05D005625 2.4e-08 65.1 393 20.9
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 4.2e-08 64.3 46 71.7
Nitab4.5_0000084g0030 Nicotiana tabacum HOM05D002159 ORTHO05D005625 5.4e-08 63.9 368 19.8
Thecc.03G179100 Theobroma cacao HOM05D002159 ORTHO05D005625 9.3e-08 63.2 383 19.8
Zm00001eb162800 Zea mays HOM05D002159 ORTHO05D005625 9.3e-08 63.2 299 22.7
Lsat_1_v5_gn_2_132660 Lactuca sativa HOM05D002159 ORTHO05D005625 2.1e-07 62.0 377 19.6
Aa31LG11G3180 Aethionema arabicum HOM05D002159 ORTHO05D005625 2.7e-07 61.6 376 21.3
Manes.01G126800 Manihot esculenta HOM05D002159 ORTHO05D005625 3.5e-07 61.2 377 19.4
Prupe.2G296200 Prunus persica HOM05D002159 ORTHO05D005625 3.5e-07 61.2 386 20.5
HanXRQChr14g0462121 Helianthus annuus HOM05D002159 ORTHO05D005625 4.6e-07 60.8 377 19.4
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.3e-06 58.5 67 47.8
unitig_26.g10199 Utricularia gibba HOM05D002159 ORTHO05D005625 3.0e-06 58.2 306 20.3
Sed0009742 Sechium edule HOM05D002159 ORTHO05D005625 3.9e-06 57.8 382 19.6
Sc13g0008820 Simmondsia chinensis HOM05D002159 ORTHO05D005625 6.7e-06 57.0 394 19.0


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