Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 1.0e-154 550.1 278 100.0
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 3.7e-149 531.6 278 96.8
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 2.1e-136 489.2 303 84.5
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 3.9e-130 468.4 278 86.0
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.1e-92 344.0 279 62.4
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 3.9e-90 335.5 270 61.9
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.9e-90 335.5 279 59.5
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 5.1e-90 335.1 270 61.9
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.6e-88 330.1 277 59.2
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 6.2e-88 328.2 278 59.7
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.4e-87 326.2 279 58.8
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 3.1e-87 325.9 280 60.0
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 5.3e-87 325.1 268 61.2
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.0e-86 323.2 274 59.9
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 2.1e-83 313.2 279 58.4
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.0e-82 310.8 261 59.8
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 3.3e-81 305.8 262 62.2
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.6e-80 303.5 262 58.0
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 4.8e-80 302.0 266 55.6
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.8e-79 300.1 279 53.0
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 4.0e-79 298.9 236 61.9
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 5.3e-79 298.5 266 54.9
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 6.9e-79 298.1 258 58.5
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 9.0e-79 297.7 272 57.4
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 7.6e-78 294.7 266 57.5
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.0e-77 294.3 271 56.1
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 6.5e-77 291.6 275 56.4
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.4e-76 290.4 280 54.6
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 3.5e-75 285.8 262 56.1
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 7.9e-75 284.6 269 53.9
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 1.0e-74 284.3 268 54.1
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 3.9e-74 282.3 271 55.0
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.1e-73 280.8 279 53.0
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.5e-73 280.4 271 52.8
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 5.7e-73 278.5 277 50.5
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 7.4e-73 278.1 264 55.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.6e-72 276.9 264 54.2
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 6.3e-72 275.0 276 48.9
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 8.2e-72 274.6 259 53.7
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.1e-71 274.2 265 53.6
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.1e-71 274.2 279 53.0
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.4e-71 273.9 271 53.5
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 5.3e-71 271.9 277 52.0
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.6e-70 269.6 282 51.8
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 4.5e-70 268.9 265 49.4
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.7e-69 266.9 278 51.1
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 5.0e-69 265.4 278 50.7
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 6.5e-69 265.0 216 62.5
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.1e-68 264.2 271 50.6
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 3.2e-68 262.7 271 53.5
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 4.2e-68 262.3 278 50.7
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 7.2e-68 261.5 280 51.1
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 7.2e-68 261.5 278 51.1
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 2.1e-67 260.0 265 50.2
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 2.7e-67 259.6 280 49.6
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 7.9e-67 258.1 208 62.5
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.8e-66 256.9 230 56.5
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 8.8e-66 254.6 271 50.9
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.1e-65 254.2 274 46.7
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.5e-65 253.8 271 51.3
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 3.3e-65 252.7 273 47.3
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 3.3e-65 252.7 266 51.5
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 8.2e-64 248.1 279 47.7
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.4e-63 247.3 272 50.0
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.8e-63 246.9 228 55.3
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 3.1e-63 246.1 270 48.9
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 9.1e-63 244.6 279 48.7
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.5e-62 243.8 268 49.3
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 3.4e-62 242.7 270 48.5
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 7.7e-62 241.5 217 55.8
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 2.9e-61 239.6 270 47.0
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.1e-60 237.7 291 47.1
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 7.2e-60 235.0 247 51.8
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.2e-59 234.2 263 49.4
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.2e-59 234.2 193 59.6
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.6e-59 233.8 231 53.2
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 1.4e-58 230.7 228 53.9
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.1e-58 228.8 234 50.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.7e-58 228.4 234 50.9
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 8.8e-58 228.0 285 43.2
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.7e-56 223.8 216 53.7
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 8.2e-56 221.5 270 44.8
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.1e-55 219.2 261 46.0
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 4.5e-54 215.7 224 48.2
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 2.2e-53 213.4 257 45.1
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 3.2e-52 209.5 228 50.4
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.1e-49 201.1 221 48.9
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.5e-49 200.7 276 43.1
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 2.6e-49 199.9 257 42.8
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 2.8e-48 196.4 213 51.2
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.7e-48 196.1 177 56.5
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 6.3e-48 195.3 176 56.2
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 8.2e-48 194.9 196 52.0
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.5e-44 183.3 170 54.1
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 8.8e-34 148.3 141 56.0
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 9.8e-25 118.2 107 54.2
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.5e-17 94.4 85 56.5
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 3.6e-11 73.2 257 28.4
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 8.0e-11 72.0 57 54.4
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 5.2e-10 69.3 57 52.6
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 1.4e-07 61.2 64 45.3
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.1e-06 57.4 57 47.4
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 3.5e-06 56.6 87 40.2
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.5e-06 56.6 44 52.3


User provided reference genes

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