Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 6.4e-82 307.4 157 100.0
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 3.6e-56 221.9 146 82.9
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 9.4e-33 144.1 117 77.8
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 6.3e-29 131.3 137 58.4
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 1.4e-28 130.2 145 55.2
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 5.3e-28 128.3 143 58.0
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.3e-26 123.6 151 52.3
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 1.3e-26 123.6 151 52.3
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 2.9e-26 122.5 145 53.1
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.8e-26 122.1 143 50.3
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 6.5e-26 121.3 142 52.1
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 6.5e-26 121.3 146 52.7
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 6.5e-26 121.3 152 52.0
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 8.5e-26 120.9 142 52.1
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 8.5e-26 120.9 141 52.5
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.1e-25 120.6 141 56.7
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.5e-25 120.2 142 52.8
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.5e-25 120.2 136 52.9
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 1.9e-25 119.8 140 52.1
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 2.5e-25 119.4 140 51.4
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 3.2e-25 119.0 113 61.1
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 3.2e-25 119.0 103 61.2
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 7.2e-25 117.9 138 52.9
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.1e-24 116.3 132 49.2
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 2.1e-24 116.3 141 50.4
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 3.6e-24 115.5 145 53.8
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 4.7e-24 115.2 134 51.5
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 4.7e-24 115.2 146 50.0
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.8e-23 113.2 124 54.0
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 2.3e-23 112.8 142 52.8
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 2.3e-23 112.8 137 51.1
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 2.3e-23 112.8 137 54.7
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 3.0e-23 112.5 142 47.2
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 3.0e-23 112.5 110 60.0
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 4.0e-23 112.1 107 59.8
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 5.2e-23 111.7 136 50.0
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 6.8e-23 111.3 100 61.0
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 6.8e-23 111.3 102 57.8
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 8.8e-23 110.9 145 51.0
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 8.8e-23 110.9 146 47.3
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 1.2e-22 110.5 138 50.7
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 1.2e-22 110.5 102 59.8
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.0e-22 109.8 134 50.7
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 2.6e-22 109.4 145 50.3
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 3.4e-22 109.0 148 49.3
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 3.4e-22 109.0 151 49.0
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.4e-22 109.0 134 52.2
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 3.4e-22 109.0 125 54.4
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 4.4e-22 108.6 141 48.2
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 5.7e-22 108.2 120 54.2
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 5.7e-22 108.2 125 53.6
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 7.5e-22 107.8 108 53.7
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 7.5e-22 107.8 152 47.4
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 9.8e-22 107.5 138 49.3
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 9.8e-22 107.5 139 50.4
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 9.8e-22 107.5 106 54.7
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.3e-21 107.1 104 53.8
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.3e-21 107.1 143 49.0
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 1.7e-21 106.7 143 44.1
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.7e-21 106.7 135 49.6
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 2.2e-21 106.3 132 49.2
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 3.7e-21 105.5 101 57.4
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 3.7e-21 105.5 148 47.3
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 6.3e-21 104.8 141 48.2
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 8.3e-21 104.4 144 48.6
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 8.3e-21 104.4 143 49.7
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 1.4e-20 103.6 113 54.9
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 3.1e-20 102.4 151 48.3
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 4.1e-20 102.1 169 42.6
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 4.1e-20 102.1 142 50.0
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 7.0e-20 101.3 94 55.3
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 7.0e-20 101.3 115 51.3
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 1.2e-19 100.5 150 45.3
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.6e-19 100.1 144 47.2
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.6e-19 100.1 145 45.5
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 2.7e-19 99.4 103 53.4
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 2.7e-19 99.4 104 53.8
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 4.5e-19 98.6 137 43.1
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 4.5e-19 98.6 134 45.5
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 5.9e-19 98.2 94 57.4
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 1.3e-18 97.1 94 54.3
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.7e-18 96.7 143 46.2
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.7e-18 96.7 143 46.2
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 2.3e-18 96.3 82 61.0
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 2.3e-18 96.3 143 45.5
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 2.3e-18 96.3 143 45.5
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 3.8e-18 95.5 134 47.0
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 6.5e-18 94.7 121 48.8
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 6.5e-18 94.7 137 46.7
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 1.9e-17 93.2 83 57.8
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 5.5e-17 91.7 143 46.2
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 7.2e-17 91.3 138 44.9
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 1.6e-16 90.1 105 50.5
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 2.1e-16 89.7 90 53.3
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 2.8e-16 89.4 93 54.8
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 3.6e-16 89.0 133 42.9
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 4.7e-16 88.6 111 53.2
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 4.7e-16 88.6 104 48.1
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 4.7e-16 88.6 97 50.5
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 4.7e-16 88.6 83 54.2
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 8.0e-16 87.8 133 43.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 1.0e-15 87.4 133 42.1
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 1.0e-15 87.4 83 54.2
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.4e-15 87.0 132 45.5
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.8e-15 86.7 128 47.7
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 2.3e-15 86.3 83 54.2
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 3.0e-15 85.9 130 45.4
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 3.0e-15 85.9 127 46.5
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 3.0e-15 85.9 106 50.0
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 8.9e-15 84.3 75 57.3
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 2.0e-14 83.2 81 56.8
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 2.0e-14 83.2 76 57.9
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 2.6e-14 82.8 123 48.0
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 1.3e-13 80.5 69 55.1
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 8.3e-13 77.8 121 49.6
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 4.1e-12 75.5 134 38.1
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 7.0e-12 74.7 129 42.6
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-11 73.9 79 55.7
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 2.0e-11 73.2 114 47.4
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 2.3e-10 69.7 114 45.6
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 8.6e-10 67.8 118 42.4
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 2.5e-09 66.2 151 33.8
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.7e-08 62.0 73 49.3
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 2.3e-07 59.7 93 35.5
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 2.6e-06 56.2 150 30.0


User provided reference genes

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