Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 2.7e-222 775.0 385 100.0
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 9.2e-215 750.0 385 96.9
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 3.1e-178 628.6 381 82.4
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 5.3e-162 574.7 445 67.4
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 3.0e-149 532.3 331 73.1
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 5.7e-148 528.1 332 72.3
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 3.1e-146 522.3 369 66.7
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 1.2e-145 520.4 340 70.6
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 4.5e-145 518.5 330 71.8
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.7e-144 516.5 343 71.1
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 5.5e-143 511.5 352 69.3
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 1.5e-140 503.4 333 70.6
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 9.7e-140 500.7 339 70.5
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 1.3e-139 500.4 371 65.2
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.7e-139 500.0 336 70.2
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.2e-139 499.6 330 70.0
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 2.8e-139 499.2 366 67.5
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 2.8e-139 499.2 340 68.2
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 6.3e-139 498.0 336 68.8
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 6.3e-139 498.0 329 70.5
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 3.1e-138 495.7 339 69.3
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 4.1e-138 495.4 327 70.3
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 7.0e-138 494.6 336 69.6
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 7.0e-138 494.6 355 65.6
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.2e-137 493.8 360 65.3
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.6e-137 493.4 330 70.3
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.6e-137 493.4 328 70.4
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 2.6e-137 492.7 347 64.6
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 3.5e-137 492.3 330 69.7
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 4.5e-137 491.9 336 68.2
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 4.5e-137 491.9 331 67.7
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 7.7e-137 491.1 368 65.8
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 2.2e-136 489.6 361 65.4
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 2.9e-136 489.2 358 66.2
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 5.0e-136 488.4 327 67.6
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.9e-135 486.5 339 67.0
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.9e-135 486.5 336 67.9
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 3.2e-135 485.7 354 66.7
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 5.5e-135 485.0 342 68.7
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 1.6e-134 483.4 321 69.5
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 1.6e-134 483.4 336 67.9
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.1e-134 483.0 321 69.5
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 2.1e-134 483.0 338 67.8
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 6.1e-134 481.5 332 65.7
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 1.0e-133 480.7 323 70.3
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 5.2e-133 478.4 328 66.2
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 8.8e-133 477.6 330 65.8
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.5e-132 476.9 326 66.3
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.0e-132 476.5 356 64.6
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 4.4e-132 475.3 337 67.1
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 9.7e-132 474.2 334 66.8
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 2.8e-131 472.6 373 60.9
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 4.8e-131 471.9 347 64.3
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 6.3e-131 471.5 347 64.3
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 6.3e-131 471.5 329 64.1
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 1.4e-130 470.3 347 64.0
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 1.4e-130 470.3 347 63.4
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 2.4e-130 469.5 347 63.4
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 3.1e-130 469.2 328 64.6
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 3.1e-130 469.2 331 64.7
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 5.3e-130 468.4 328 64.3
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 9.4e-127 457.6 334 65.3
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 2.3e-125 453.0 331 62.8
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 2.6e-124 449.5 334 63.5
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 3.4e-124 449.1 366 60.9
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 3.4e-124 449.1 344 63.4
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 4.4e-124 448.7 389 59.9
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 7.5e-124 448.0 328 64.9
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 7.5e-124 448.0 344 62.8
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 2.8e-123 446.0 316 65.8
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 8.3e-123 444.5 337 62.6
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 1.8e-122 443.4 325 65.8
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 2.4e-122 443.0 320 65.9
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 3.1e-122 442.6 336 61.9
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 5.4e-122 441.8 345 60.3
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 2.0e-121 439.9 346 63.0
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 7.7e-121 438.0 326 63.2
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.9e-120 436.0 330 63.6
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 3.8e-120 435.6 316 64.2
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 6.5e-120 434.9 321 65.1
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.1e-119 434.1 330 63.6
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 1.1e-119 434.1 322 65.2
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 1.5e-119 433.7 337 60.5
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 7.2e-119 431.4 345 59.4
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 4.7e-118 428.7 324 62.0
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 2.6e-116 422.9 368 58.2
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 3.4e-116 422.5 329 63.2
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 5.7e-116 421.8 320 61.2
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 2.4e-114 416.4 293 66.6
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 4.1e-114 415.6 574 43.2
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 2.0e-113 413.3 286 67.1
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 1.1e-111 407.5 329 58.1
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 2.5e-111 406.4 298 64.8
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 2.5e-111 406.4 298 64.8
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.6e-110 403.7 323 61.0
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 8.0e-110 401.4 323 61.6
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 6.8e-109 398.3 363 54.5
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 7.5e-108 394.8 291 60.5
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 7.5e-108 394.8 323 59.8
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 9.8e-108 394.4 327 60.2
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 1.3e-107 394.0 310 61.3
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 2.9e-107 392.9 291 64.3
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 6.4e-107 391.7 324 58.0
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.8e-106 390.2 341 56.0
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.2e-106 389.4 261 67.8
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 1.5e-103 380.6 278 61.5
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 5.6e-103 378.6 326 55.2
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 1.2e-102 377.5 326 56.1
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 2.1e-102 376.7 238 69.3
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 6.2e-102 375.2 353 52.1
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 5.4e-98 362.1 322 56.8
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 1.2e-97 360.9 265 62.3
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 6.0e-97 358.6 387 49.1
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 1.1e-95 354.4 296 59.8
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 4.7e-94 349.0 261 64.0
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 5.2e-93 345.5 348 52.3
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 7.8e-89 331.6 324 50.6
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 3.9e-88 329.3 255 57.3
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 2.5e-87 326.6 299 50.8
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 6.8e-85 318.5 204 70.6
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 1.7e-83 313.9 197 73.1
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 3.6e-78 296.2 324 45.4
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 9.0e-77 291.6 176 74.4
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 7.1e-74 282.0 340 45.6
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.1e-69 268.1 194 61.3
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.4e-69 267.7 314 42.0
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 5.3e-69 265.8 203 61.1
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 4.2e-66 256.1 245 50.2
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 3.5e-65 253.1 305 46.2
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 8.7e-56 221.9 192 57.8
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 6.9e-53 212.2 215 51.2
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.2e-52 211.5 139 68.3
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 7.6e-52 208.8 256 43.0
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 1.0e-51 208.4 250 44.0
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.1e-47 194.9 160 58.1
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 2.8e-46 190.3 209 49.3
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 6.3e-46 189.1 211 49.3
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 7.6e-44 182.2 288 34.7
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.2e-41 174.9 129 65.1
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.4e-37 161.4 149 51.0
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 2.2e-35 154.1 324 33.3
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 3.0e-32 143.7 79 81.0
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 7.4e-31 139.0 135 50.4
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 7.4e-23 112.5 120 47.5
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 2.4e-21 107.5 270 30.4
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.1e-21 106.7 89 58.4
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.1e-21 106.7 89 58.4
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 3.8e-19 100.1 181 34.8
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 4.0e-16 90.1 57 75.4
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 1.5e-15 88.2 50 80.0
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 3.7e-14 83.6 71 60.6
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 4.8e-14 83.2 112 42.9
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 2.7e-09 67.4 63 49.2
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 8.0e-09 65.9 46 60.9
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.3e-06 58.5 42 66.7


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