Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.4e-156 555.4 277 100.0
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 5.9e-131 471.1 277 89.2
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.1e-119 432.2 276 82.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 5.4e-100 368.2 277 71.5
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.5e-86 323.6 264 64.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 5.8e-86 321.6 241 66.4
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 4.9e-85 318.5 259 62.9
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 4.9e-85 318.5 263 61.2
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 6.4e-85 318.2 273 61.9
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 1.4e-84 317.0 263 62.4
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 4.6e-83 312.0 266 61.3
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 6.0e-83 311.6 265 63.0
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 3.9e-82 308.9 236 64.4
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 5.1e-82 308.5 248 63.3
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 6.6e-82 308.1 264 59.5
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 8.7e-82 307.8 263 61.6
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 1.1e-81 307.4 229 65.1
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.5e-81 306.2 265 59.6
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 2.8e-80 302.8 277 59.2
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 4.8e-80 302.0 228 66.2
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 8.1e-80 301.2 266 59.0
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 8.1e-80 301.2 214 67.8
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.1e-79 299.3 231 62.8
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 4.0e-79 298.9 268 60.8
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 5.3e-79 298.5 264 57.6
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 9.0e-79 297.7 254 59.4
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.6e-78 296.2 213 66.2
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 3.4e-78 295.8 263 58.6
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 3.4e-78 295.8 261 60.5
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.4e-78 295.8 251 60.2
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 4.5e-78 295.4 231 61.9
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 5.8e-78 295.0 263 58.6
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 9.9e-78 294.3 263 57.8
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.3e-77 293.9 208 66.8
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.7e-77 293.5 224 64.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 2.2e-77 293.1 204 69.6
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 3.8e-77 292.4 260 57.7
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 3.8e-77 292.4 246 61.4
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 4.9e-77 292.0 204 69.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.9e-77 292.0 272 55.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.9e-77 292.0 272 55.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 6.4e-77 291.6 207 67.6
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 6.4e-77 291.6 250 61.2
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 8.4e-77 291.2 204 69.1
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 8.4e-77 291.2 252 60.7
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 1.1e-76 290.8 268 58.2
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.9e-76 290.0 246 58.1
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 3.2e-76 289.3 256 58.2
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 5.5e-76 288.5 236 61.4
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 5.5e-76 288.5 228 64.5
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 7.1e-76 288.1 223 63.7
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 7.1e-76 288.1 204 68.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 9.3e-76 287.7 210 64.3
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.7e-75 286.2 240 62.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 7.9e-75 284.6 231 59.7
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 3.0e-74 282.7 225 62.7
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.0e-74 282.7 235 60.9
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 4.3e-73 278.9 250 57.2
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 5.6e-73 278.5 229 59.8
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.1e-71 274.2 226 59.3
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.3e-71 271.9 225 59.6
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 2.6e-70 269.6 252 56.0
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 4.5e-70 268.9 240 57.9
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.2e-69 266.5 219 63.5
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 1.1e-68 264.2 215 62.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.4e-68 263.8 198 65.2
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.3e-66 257.3 220 62.7
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.9e-66 255.8 192 68.8
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.1e-65 254.2 224 54.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 2.5e-65 253.1 183 68.3
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 4.8e-64 248.8 229 53.3
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 5.3e-63 245.4 202 61.4
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 7.4e-57 224.9 209 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 1.5e-54 217.2 207 50.7
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.0e-54 216.9 174 66.1
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.7e-53 213.8 209 52.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 5.0e-53 212.2 180 58.3
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.9e-52 210.3 240 49.2
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.9e-52 210.3 189 58.2
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 7.4e-49 198.4 205 48.8
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 5.9e-46 188.7 157 61.1
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.1e-43 180.3 132 68.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 7.4e-41 171.8 263 39.5
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 2.4e-39 166.8 250 40.8
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 5.3e-39 165.6 121 70.2
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 3.6e-35 152.9 111 64.9
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 1.8e-34 150.6 107 70.1
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 5.3e-31 139.0 169 49.1
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.2e-30 137.9 112 58.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 2.5e-28 130.2 82 74.4
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.3e-26 123.6 81 72.8
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.7e-24 117.5 106 52.8
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 2.2e-24 117.1 215 34.4
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.1e-12 78.2 44 77.3
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 3.6e-11 73.2 95 45.3


User provided reference genes

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