Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 6.3e-83 310.8 171 100.0
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 4.3e-55 218.4 115 98.3
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 4.1e-50 201.8 121 86.8
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 5.4e-50 201.4 115 89.6
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.3e-48 196.8 115 84.3
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 3.0e-48 195.7 115 85.2
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.1e-48 194.9 121 80.2
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.1e-48 194.9 121 80.2
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.1e-48 194.9 121 80.2
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 5.1e-48 194.9 121 80.2
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 6.6e-48 194.5 115 85.2
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.1e-47 193.7 115 84.3
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 1.1e-47 193.7 114 85.1
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.1e-47 193.7 115 84.3
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.1e-47 193.7 115 84.3
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.1e-47 193.7 115 84.3
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.1e-47 193.7 115 85.2
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.9e-47 193.0 115 84.3
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.9e-47 193.0 114 86.8
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 2.5e-47 192.6 115 85.2
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.5e-47 192.6 115 86.1
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 3.3e-47 192.2 110 84.5
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.3e-47 192.2 110 86.4
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 4.3e-47 191.8 110 85.5
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 5.6e-47 191.4 105 92.4
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 7.3e-47 191.0 130 75.4
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 7.3e-47 191.0 122 82.0
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.2e-46 190.3 111 85.6
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.1e-46 189.5 115 84.3
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 3.6e-46 188.7 111 84.7
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 4.7e-46 188.3 115 81.7
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 4.7e-46 188.3 115 81.7
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 8.1e-46 187.6 111 85.6
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 8.1e-46 187.6 120 85.0
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.1e-45 187.2 117 81.2
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.1e-45 187.2 117 81.2
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.1e-45 187.2 117 81.2
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 1.4e-45 186.8 115 85.2
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 1.4e-45 186.8 115 85.2
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 1.8e-45 186.4 115 84.3
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-45 186.4 115 84.3
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 1.8e-45 186.4 115 84.3
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 1.8e-45 186.4 115 84.3
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 1.8e-45 186.4 110 85.5
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.4e-45 186.0 115 83.5
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 3.1e-45 185.7 121 76.9
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 4.0e-45 185.3 115 83.5
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 4.0e-45 185.3 115 83.5
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 4.0e-45 185.3 115 83.5
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 4.0e-45 185.3 124 77.4
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 4.0e-45 185.3 115 80.9
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 4.0e-45 185.3 121 77.7
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 5.2e-45 184.9 112 83.0
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 5.2e-45 184.9 115 84.3
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 5.2e-45 184.9 110 83.6
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 5.2e-45 184.9 113 82.3
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 5.2e-45 184.9 121 78.5
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.8e-45 184.5 109 82.6
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 6.8e-45 184.5 135 77.0
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 6.8e-45 184.5 105 88.6
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 6.8e-45 184.5 124 76.6
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 8.9e-45 184.1 134 73.1
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 8.9e-45 184.1 132 72.7
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 8.9e-45 184.1 121 76.9
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.2e-44 183.7 119 79.0
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-44 183.7 115 83.5
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-44 183.7 115 83.5
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.2e-44 183.7 115 83.5
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.2e-44 183.7 115 82.6
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 1.2e-44 183.7 115 82.6
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.2e-44 183.7 114 81.6
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.5e-44 183.3 114 83.3
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.5e-44 183.3 117 79.5
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.0e-44 183.0 121 76.9
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.6e-44 182.6 109 81.7
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 2.6e-44 182.6 115 80.9
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 3.4e-44 182.2 114 81.6
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.4e-44 182.2 123 81.3
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 5.8e-44 181.4 124 75.0
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 5.8e-44 181.4 121 77.7
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 9.9e-44 180.6 115 81.7
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 9.9e-44 180.6 142 71.1
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.3e-43 180.3 115 81.7
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 2.2e-43 179.5 122 75.4
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.8e-43 178.7 110 83.6
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 6.4e-43 177.9 121 74.4
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 6.4e-43 177.9 116 78.4
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 8.4e-43 177.6 115 80.0
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 1.1e-42 177.2 124 73.4
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 5.4e-42 174.9 123 71.5
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 7.1e-42 174.5 113 81.4
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 9.3e-42 174.1 127 71.7
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 9.3e-42 174.1 122 73.8
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 9.3e-42 174.1 115 73.9
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 2.1e-41 172.9 106 84.0
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 2.7e-41 172.6 128 71.1
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 2.7e-41 172.6 105 81.9
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 3.5e-41 172.2 114 79.8
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 4.6e-41 171.8 113 77.9
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 6.0e-41 171.4 110 80.9
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 7.8e-41 171.0 109 79.8
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 7.8e-41 171.0 126 69.8
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 7.8e-41 171.0 112 75.9
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.3e-40 170.2 147 68.0
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.3e-40 170.2 101 87.1
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 3.0e-40 169.1 101 86.1
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 3.9e-40 168.7 111 74.8
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 9.6e-39 164.1 105 74.3
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 2.8e-38 162.5 115 70.4
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 6.2e-38 161.4 93 86.0
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 6.2e-38 161.4 110 73.6
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.1e-37 160.6 110 71.8
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.8e-37 159.8 105 76.2
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 3.1e-37 159.1 135 63.7
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 9.0e-37 157.5 128 66.4
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 2.0e-36 156.4 116 75.0
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 7.6e-36 154.5 113 70.8
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 1.0e-32 144.1 182 47.3
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 6.6e-32 141.4 84 89.3
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 4.8e-30 135.2 115 62.6
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 8.1e-30 134.4 108 61.1
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 2.6e-28 129.4 123 60.2
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.3e-27 127.1 117 61.5
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-26 124.0 100 65.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.6e-25 120.2 75 77.3
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 5.6e-23 111.7 94 61.7
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 8.1e-22 107.8 63 92.1
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 4.0e-21 105.5 62 91.9
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 2.0e-20 103.2 113 54.0
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.3e-19 100.5 62 85.5
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 4.9e-19 98.6 64 84.4
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 6.5e-19 98.2 78 60.3
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 6.5e-19 98.2 81 70.4
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-18 96.7 53 81.1
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 5.5e-18 95.1 53 81.1
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 9.3e-18 94.4 62 88.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 1.2e-17 94.0 60 81.7
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 2.1e-17 93.2 96 49.0
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.8e-16 90.1 61 75.4
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 8.7e-16 87.8 52 73.1
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 8.7e-16 87.8 120 40.0
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.1e-15 87.4 61 73.8
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.6e-14 83.6 113 47.8
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 4.8e-14 82.0 77 54.5
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 4.1e-13 79.0 43 83.7
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 2.2e-11 73.2 112 41.1
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 2.5e-10 69.7 43 81.4
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.5e-10 69.7 42 83.3
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 5.5e-10 68.6 88 47.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.9e-07 60.1 57 57.9
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.3e-07 58.9 40 77.5
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.3e-07 58.9 41 70.7
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 3.7e-06 55.8 123 33.3


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