Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.1e-167 593.2 297 100.0
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 4.2e-159 564.7 297 95.3
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 3.6e-134 481.9 297 82.8
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 5.4e-130 468.0 365 69.9
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.9e-119 433.0 295 73.9
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.0e-116 422.9 297 72.1
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.2e-115 419.5 301 71.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 3.7e-115 418.7 296 71.3
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.4e-114 416.8 288 72.6
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 2.7e-113 412.5 301 71.1
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.3e-112 409.5 282 72.3
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 6.6e-112 407.9 279 71.0
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.5e-111 406.8 280 71.1
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.8e-110 402.5 289 69.6
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 8.1e-110 401.0 297 67.3
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.4e-109 399.4 278 69.4
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 6.8e-109 397.9 301 69.1
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 4.4e-108 395.2 275 70.9
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.7e-107 393.3 292 71.2
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 2.2e-107 392.9 278 68.7
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.8e-107 392.1 289 68.2
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.8e-107 392.1 289 68.2
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 6.4e-107 391.3 298 68.5
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.1e-106 390.6 291 68.4
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.9e-106 389.8 245 78.0
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 7.1e-106 387.9 288 68.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.2e-106 387.5 288 67.7
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 9.2e-106 387.5 297 67.0
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.2e-105 387.1 295 67.8
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 2.7e-105 386.0 295 67.5
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 3.5e-105 385.6 294 66.0
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 4.6e-105 385.2 246 76.0
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.0e-104 384.0 296 67.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.3e-104 383.6 280 68.2
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 3.9e-104 382.1 289 67.1
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 3.9e-104 382.1 297 65.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 8.7e-104 380.9 296 66.9
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.1e-103 380.6 299 65.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.5e-103 380.2 297 63.6
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 2.5e-103 379.4 299 66.6
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 3.3e-103 379.0 297 66.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.3e-103 378.6 297 66.0
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 4.3e-103 378.6 299 65.2
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.6e-102 376.7 256 72.7
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 3.6e-102 375.6 244 73.4
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.2e-102 374.8 300 65.0
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.4e-101 373.6 287 66.9
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.8e-101 373.2 291 64.9
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 3.1e-101 372.5 259 70.7
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 4.0e-101 372.1 294 66.3
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.2e-100 370.5 292 66.8
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 2.0e-100 369.8 248 73.0
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 2.0e-100 369.8 248 73.0
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 2.0e-100 369.8 248 73.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 4.4e-100 368.6 306 64.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 5.8e-100 368.2 292 65.4
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 7.6e-100 367.9 244 73.8
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.3e-99 367.1 246 73.2
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.3e-99 367.1 246 73.2
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.3e-99 367.1 249 72.7
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.3e-99 367.1 296 65.2
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 2.9e-99 365.9 310 61.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.8e-99 365.5 247 74.5
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.4e-98 362.8 308 61.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 5.4e-98 361.7 217 80.2
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.1e-97 359.8 252 69.8
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 3.5e-97 359.0 252 70.2
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 7.8e-97 357.8 290 63.1
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.8e-97 357.8 317 59.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 1.3e-96 357.1 290 63.1
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 2.3e-96 356.3 278 66.9
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 3.0e-96 355.9 253 70.0
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 3.0e-96 355.9 252 68.7
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 5.1e-96 355.1 217 79.7
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 5.1e-96 355.1 302 62.3
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 8.1e-94 347.8 270 66.7
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 8.1e-94 347.8 270 66.7
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 7.6e-92 341.3 290 60.3
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 6.4e-91 338.2 239 71.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 7.1e-90 334.7 261 65.1
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.2e-89 334.0 303 57.1
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 2.1e-89 333.2 302 59.3
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.1e-88 328.6 234 71.4
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.1e-87 327.4 247 68.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 6.2e-86 321.6 254 65.7
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 8.1e-86 321.2 283 58.3
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 9.0e-85 317.8 249 69.1
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 9.9e-84 314.3 211 71.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.2e-83 313.2 266 64.3
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.1e-82 310.8 288 60.4
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.4e-82 310.5 287 57.5
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 9.3e-82 307.8 256 62.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.3e-78 297.4 216 71.3
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.7e-75 287.0 265 60.8
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.9e-75 286.2 265 60.8
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.0e-72 277.7 287 50.9
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.3e-72 277.3 328 50.0
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 9.7e-71 271.2 183 69.9
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.3e-70 268.5 299 52.5
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 8.2e-70 268.1 264 57.2
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.4e-69 267.3 157 85.4
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.0e-68 263.5 196 69.9
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.7e-67 260.4 256 51.2
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 2.0e-52 210.3 175 62.3
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 9.4e-42 174.9 130 64.6
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.2e-39 167.9 101 73.3
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 4.1e-37 159.5 255 38.0
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.2e-33 147.9 107 67.3
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 2.3e-27 127.1 203 36.5
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 3.9e-11 73.2 101 42.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 5.0e-11 72.8 56 67.9


User provided reference genes

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