Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009366.2 Cucumis melo HOM05D001011 ORTHO05D000851 2.9e-51 204.9 101 100.0
CsaV3_3G036060 Cucumis sativus L. HOM05D001011 ORTHO05D000851 2.2e-30 135.6 77 83.1
ClCG10G020040 Citrullus lanatus HOM05D001011 ORTHO05D000851 3.7e-30 134.8 77 83.1
Sed0016755 Sechium edule HOM05D001011 ORTHO05D000851 1.1e-29 133.3 78 80.8
MELO3C031378.2 Cucumis melo HOM05D001011 ORTHO05D000851 3.0e-16 88.6 79 63.3
CsaV3_1G018470 Cucumis sativus L. HOM05D001011 ORTHO05D000851 5.9e-12 74.3 41 85.4
QL07p043032 Quercus lobata HOM05D001011 ORTHO05D000851 5.5e-10 67.8 73 45.2
MD04G1091600 Malus domestica HOM05D001011 ORTHO05D000851 1.2e-09 66.6 73 43.8
Prupe.7G128200 Prunus persica HOM05D001011 ORTHO05D000851 1.2e-09 66.6 73 45.2
GSVIVG01033656001 Vitis vinifera HOM05D001011 ORTHO05D000851 2.1e-09 65.9 76 46.1
COL.COLO4_09332 Corchorus olitorius HOM05D001011 ORTHO05D000851 3.6e-09 65.1 91 37.4
Cfa017632 Carpinus fangiana HOM05D001011 ORTHO05D000851 6.1e-09 64.3 73 45.2
arahy.Tifrunner.gnm1.ann1.BQWU45 Arachis hypogaea HOM05D001011 ORTHO05D000851 1.0e-08 63.5 62 50.0
arahy.Tifrunner.gnm1.ann1.Z7QWNS Arachis hypogaea HOM05D001011 ORTHO05D000851 1.0e-08 63.5 62 50.0
DCAR_019062 Daucus carota HOM05D001011 ORTHO05D000851 1.8e-08 62.8 47 48.9
Lalb_Chr02g0155771 Lupinus albus HOM05D001011 ORTHO05D000851 2.3e-08 62.4 64 45.3
VMungo0720G2153 Vigna mungo HOM05D001011 ORTHO05D000851 3.0e-08 62.0 68 44.1
GSVIVG01016184001 Vitis vinifera HOM05D001011 ORTHO05D000851 4.0e-08 61.6 73 39.7
Ca_10536_v3 Cicer arietinum L. HOM05D001011 ORTHO05D000851 5.2e-08 61.2 41 58.5
Duzib093G1823 Durio zibethinus HOM05D001011 ORTHO05D000851 6.7e-08 60.8 54 50.0
Lalb_Chr02g0152041 Lupinus albus HOM05D001011 ORTHO05D000851 6.7e-08 60.8 62 48.4
MD12G1109500 Malus domestica HOM05D001011 ORTHO05D000851 6.7e-08 60.8 73 45.2
Psat6g180240 Pisum sativum HOM05D001011 ORTHO05D000851 6.7e-08 60.8 41 58.5
TWI53G1876 Tripterygium wilfordii HOM05D001011 ORTHO05D000851 6.7e-08 60.8 76 40.8
Phvul.007G148400 Phaseolus vulgaris HOM05D001011 ORTHO05D000851 1.1e-07 60.1 73 39.7
COL.COLO4_26942 Corchorus olitorius HOM05D001011 ORTHO05D000851 1.5e-07 59.7 73 42.5
Atru.chr8.1782 Acer truncatum HOM05D001011 ORTHO05D000851 2.0e-07 59.3 66 42.4
Duzib106G1230 Durio zibethinus HOM05D001011 ORTHO05D000851 2.0e-07 59.3 73 42.5
Medtr1g094145 Medicago truncatula HOM05D001011 ORTHO05D000851 2.0e-07 59.3 51 51.0
CiPaw.10G128800 Carya illinoinensis HOM05D001011 ORTHO05D000851 2.6e-07 58.9 65 46.2
Dinv35796 Davidia involucrata HOM05D001011 ORTHO05D000851 2.6e-07 58.9 79 40.5
Manes.09G064700 Manihot esculenta HOM05D001011 ORTHO05D000851 2.6e-07 58.9 77 39.0
Glyma.20G183600 Glycine max HOM05D001011 ORTHO05D000851 3.3e-07 58.5 44 54.5
Atru.chr12.861 Acer truncatum HOM05D001011 ORTHO05D000851 4.4e-07 58.2 47 46.8
Lj5g0012592 Lotus japonicus HOM05D001011 ORTHO05D000851 4.4e-07 58.2 43 55.8
Glyma.03G184400 Glycine max HOM05D001011 ORTHO05D000851 5.7e-07 57.8 91 37.4
Nitab4.5_0001450g0170 Nicotiana tabacum HOM05D001011 ORTHO05D000851 5.7e-07 57.8 45 51.1
Nitab4.5_0008227g0010 Nicotiana tabacum HOM05D001011 ORTHO05D000851 5.7e-07 57.8 42 52.4
HanXRQChr14g0455741 Helianthus annuus HOM05D001011 ORTHO05D000851 7.5e-07 57.4 55 41.8
CiPaw.09G171300 Carya illinoinensis HOM05D001011 ORTHO05D000851 9.7e-07 57.0 66 40.9
Ciclev10033705m.g Citrus clementina HOM05D001011 ORTHO05D000851 9.7e-07 57.0 79 34.2
arahy.Tifrunner.gnm1.ann1.61VEI2 Arachis hypogaea HOM05D001011 ORTHO05D000851 1.3e-06 56.6 78 42.3
arahy.Tifrunner.gnm1.ann1.AI3AW5 Arachis hypogaea HOM05D001011 ORTHO05D000851 1.3e-06 56.6 78 42.3
ECA238G4357 Erigeron canadensis HOM05D001011 ORTHO05D000851 1.3e-06 56.6 68 41.2
unitig_46.g18607 Utricularia gibba HOM05D001011 ORTHO05D000851 1.3e-06 56.6 57 47.4
CANSAT56G0914 Cannabis sativa HOM05D001011 ORTHO05D000851 1.7e-06 56.2 82 40.2
Glyma.10G207200 Glycine max HOM05D001011 ORTHO05D000851 1.7e-06 56.2 44 52.3
HanXRQChr07g0194711 Helianthus annuus HOM05D001011 ORTHO05D000851 1.7e-06 56.2 68 39.7
RcHm_v2.0_Chr3g0470451 Rosa chinensis HOM05D001011 ORTHO05D000851 1.7e-06 56.2 73 42.5
CAN.G321.52 Capsicum annuum HOM05D001011 ORTHO05D000851 2.2e-06 55.8 57 43.9
Lsat_1_v5_gn_2_108540 Lactuca sativa HOM05D001011 ORTHO05D000851 2.2e-06 55.8 77 42.9
Phvul.007G099500 Phaseolus vulgaris HOM05D001011 ORTHO05D000851 2.2e-06 55.8 54 46.3
Solyc11g008270.2 Solanum lycopersicum HOM05D001011 ORTHO05D000851 2.2e-06 55.8 51 45.1
Sopen11g004080 Solanum pennellii HOM05D001011 ORTHO05D000851 2.2e-06 55.8 51 45.1
Thecc.10G085800 Theobroma cacao HOM05D001011 ORTHO05D000851 2.2e-06 55.8 83 36.1
TPR.G10284 Trifolium pratense HOM05D001011 ORTHO05D000851 2.2e-06 55.8 41 56.1
CiPaw.01G267900 Carya illinoinensis HOM05D001011 ORTHO05D000851 2.8e-06 55.5 79 39.2
FvH4_6g16540 Fragaria vesca HOM05D001011 ORTHO05D000851 2.8e-06 55.5 73 42.5
FAN02G3602 Fragaria x ananassa HOM05D001011 ORTHO05D000851 2.8e-06 55.5 73 42.5
FAN14G2935 Fragaria x ananassa HOM05D001011 ORTHO05D000851 2.8e-06 55.5 73 42.5
Rhsim03G0115500 Rhododendron simsii HOM05D001011 ORTHO05D000851 2.8e-06 55.5 40 47.5
Dinv36387 Davidia involucrata HOM05D001011 ORTHO05D000851 4.8e-06 54.7 73 38.4
MD01G1102400 Malus domestica HOM05D001011 ORTHO05D000851 4.8e-06 54.7 80 41.2
Sabra08G0023000 Salix brachista HOM05D001011 ORTHO05D000851 4.8e-06 54.7 47 44.7
Duzib106G2066 Durio zibethinus HOM05D001011 ORTHO05D000851 6.3e-06 54.3 79 36.7
PGSC0003DMG400031067 Solanum tuberosum HOM05D001011 ORTHO05D000851 8.2e-06 53.9 51 43.1


User provided reference genes

Program Settings