Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001011', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001011' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001011' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001011' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001011' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001011', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001011' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001011' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001011' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001011' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001011', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001011' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001011' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001011' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001011' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001011', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001011' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001011', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '598', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' ) ), 'genes' => array( 'A02p39770' => 'bna', 'A06p11350' => 'bna', 'A08p31630' => 'bna', 'A09p47820' => 'bna', 'A10p32570' => 'bna', 'Aa31LG11G4540' => 'aar', 'Aa31LG8G2970' => 'aar', 'Aa31sc43G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2300' => 'aag', 'Actinidia01752' => 'ach', 'Actinidia08803' => 'ach', 'Actinidia14605' => 'ach', 'Actinidia15992' => 'ach', 'Actinidia18610' => 'ach', 'Actinidia21980' => 'ach', 'Actinidia22347' => 'ach', 'Actinidia25099' => 'ach', 'Actinidia34801' => 'ach', 'Actinidia38873' => 'ach', 'Actinidia40477' => 'ach', 'Ah.01g006560' => 'amhyb', 'Ah.09g226290' => 'amhyb', 'Ah.14g079600' => 'amhyb', 'Ah.16g104440' => 'amhyb', 'AL1G27440' => 'aly', 'AL3G28430' => 'aly', 'AL5G35990' => 'aly', 'AL6G12790' => 'aly', 'AL6G37090' => 'aly', 'Aqoxy7G02214' => 'aox', 'Aqoxy7G03688' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2GXV3R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51SZI1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61VEI2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.96ZVDF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AI3AW5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BQWU45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EL42AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6KWIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63XIF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KY4V2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q1E3QB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QGS5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7QWNS' => 'arhy', 'AT1G15350' => 'ath', 'AT3G15770' => 'ath', 'AT3G54880' => 'ath', 'AT4G32342' => 'ath', 'AT5G03440' => 'ath', 'AT5G25360' => 'ath', 'ATR1120G101' => 'atr', 'Atru.chr1.2989' => 'acertr', 'Atru.chr12.861' => 'acertr', 'Atru.chr7.1140' => 'acertr', 'Atru.chr7.2421' => 'acertr', 'Atru.chr8.1782' => 'acertr', 'AUR62011528' => 'cqu', 'AUR62012388' => 'cqu', 'AUR62013348' => 'cqu', 'AUR62016347' => 'cqu', 'AUR62031514' => 'cqu', 'BcaB01g00150' => 'bca', 'BcaB03g13066' => 'bca', 'BcaB03g14548' => 'bca', 'BcaC01g01028' => 'bca', 'BcaC03g17908' => 'bca', 'BcaC05g25471' => 'bca', 'BcaC05g25493' => 'bca', 'BcaC06g32059' => 'bca', 'BcaC06g32062' => 'bca', 'BcaC07g38779' => 'bca', 'BcaC07g39770' => 'bca', 'BcaC07g41510' => 'bca', 'BcaNung03218' => 'bca', 'BolC5t30085H' => 'bol', 'BolC7t44776H' => 'bol', 'BolC8t49337H' => 'bol', 'BolC8t50616H' => 'bol', 'BolC9t60073H' => 'bol', 'BraA02t08943Z' => 'bra', 'BraA06t24314Z' => 'bra', 'BraA06t26531Z' => 'bra', 'BraA08t35085Z' => 'bra', 'BraA09t40239Z' => 'bra', 'BraA09t41520Z' => 'bra', 'BraA10t45292Z' => 'bra', 'C02p59560' => 'bna', 'C03p87380' => 'bna', 'C05p13480' => 'bna', 'C08p17110' => 'bna', 'C08p30070' => 'bna', 'C09p73370' => 'bna', 'CAN.G1503.4' => 'can', 'CAN.G321.52' => 'can', 'CAN.G407.91' => 'can', 'CANSAT25G1483' => 'cansat', 'CANSAT56G0286' => 'cansat', 'CANSAT56G0914' => 'cansat', 'CARHR015880' => 'chi', 'CARHR090860' => 'chi', 'CARHR164860' => 'chi', 'CARHR188080' => 'chi', 'CARHR209900' => 'chi', 'CARHR240250' => 'chi', 'Carub.0001s1510' => 'cru', 'Carub.0003s1551' => 'cru', 'Carub.0005s2149' => 'cru', 'Carub.0006s0225' => 'cru', 'Carub.0006s2318' => 'cru', 'Carub.0007s0823' => 'cru', 'Ca_10536_v3' => 'car', 'Ca_13026_v3' => 'car', 'Ca_15734_v3' => 'car', 'Ca_21673_v3' => 'car', 'Ca_27520_v3' => 'car', 'Ca_30186_v3' => 'car', 'Cc02_g10840' => 'ccan', 'Cc04_g04280' => 'ccan', 'Cc06_g08380' => 'ccan', 'Cc06_g08390' => 'ccan', 'Cc08_g00690' => 'ccan', 'CDE02G0695' => 'cde', 'CDE04G0184' => 'cde', 'CDE06G2355' => 'cde', 'Cfa003387' => 'cfa', 'Cfa013150' => 'cfa', 'Cfa017632' => 'cfa', 'Ciclev10009673m.g' => 'ccl', 'Ciclev10009702m.g' => 'ccl', 'Ciclev10026612m.g' => 'ccl', 'Ciclev10033705m.g' => 'ccl', 'CiPaw.01G246500' => 'cil', 'CiPaw.01G267900' => 'cil', 'CiPaw.02G156400' => 'cil', 'CiPaw.03G245000' => 'cil', 'CiPaw.04G172100' => 'cil', 'CiPaw.06G096600' => 'cil', 'CiPaw.07G222800' => 'cil', 'CiPaw.08G011400' => 'cil', 'CiPaw.09G171300' => 'cil', 'CiPaw.10G128800' => 'cil', 'CiPaw.11G040900' => 'cil', 'ClCG06G011220' => 'cla', 'ClCG07G012640' => 'cla', 'ClCG08G007770' => 'cla', 'ClCG08G013340' => 'cla', 'ClCG09G002870' => 'cla', 'ClCG10G020040' => 'cla', 'ClCG11G003100' => 'cla', 'COL.COLO4_09332' => 'col', 'COL.COLO4_12952' => 'col', 'COL.COLO4_18853' => 'col', 'COL.COLO4_26942' => 'col', 'COL.COLO4_35112' => 'col', 'COL.COLO4_36537' => 'col', 'Cpa.g.sc10.257' => 'cpa', 'Cpa.g.sc77.55' => 'cpa', 'Cre11.g482626' => 'cre', 'CsaV3_1G018470' => 'csa', 'CsaV3_1G030230' => 'csa', 'CsaV3_2G002920' => 'csa', 'CsaV3_2G020880' => 'csa', 'CsaV3_2G021140' => 'csa', 'CsaV3_2G032060' => 'csa', 'CsaV3_3G036060' => 'csa', 'CsaV3_4G001550' => 'csa', 'CsaV3_7G032460' => 'csa', 'CSS0000700' => 'camsi', 'CSS0001197' => 'camsi', 'CSS0001484' => 'camsi', 'CSS0003008' => 'camsi', 'CSS0004871' => 'camsi', 'CSS0018610' => 'camsi', 'CSS0032485' => 'camsi', 'CSS0049952' => 'camsi', 'DCAR_019062' => 'dca', 'DCAR_021336' => 'dca', 'DCAR_025507' => 'dca', 'Dinv08657' => 'din', 'Dinv30143' => 'din', 'Dinv30595' => 'din', 'Dinv35796' => 'din', 'Dinv36387' => 'din', 'Dinv36516' => 'din', 'Dinv41503' => 'din', 'Duzib093G1823' => 'dzi', 'Duzib106G1230' => 'dzi', 'Duzib106G2066' => 'dzi', 'Duzib128G0795' => 'dzi', 'Duzib128G0957' => 'dzi', 'Duzib150G0393' => 'dzi', 'Duzib150G1387' => 'dzi', 'Duzib160G0397' => 'dzi', 'Duzib168G0334' => 'dzi', 'Duzib168G0851' => 'dzi', 'Duzib187G1146' => 'dzi', 'Duzib192G0936' => 'dzi', 'Duzib235G1230' => 'dzi', 'ECA233G2296' => 'eca', 'ECA233G4551' => 'eca', 'ECA238G4357' => 'eca', 'ECA248G1366' => 'eca', 'EL10Ac2g04225' => 'bvu', 'EL10Ac8g18672' => 'bvu', 'EL10Ac9g21911' => 'bvu', 'Eucgr.C01745' => 'egr', 'Eucgr.C04225' => 'egr', 'Eucgr.F00686' => 'egr', 'Eucgr.F03865' => 'egr', 'Eucgr.G02874' => 'egr', 'Eucgr.J03063' => 'egr', 'FAN01G3080' => 'fan', 'FAN02G1767' => 'fan', 'FAN02G3602' => 'fan', 'FAN03G1901' => 'fan', 'FAN05G4174' => 'fan', 'FAN05G5155' => 'fan', 'FAN05G5453' => 'fan', 'FAN06G4152' => 'fan', 'FAN06G4472' => 'fan', 'FAN09G2585' => 'fan', 'FAN10G3513' => 'fan', 'FAN14G1552' => 'fan', 'FAN14G2935' => 'fan', 'FAN15G2227' => 'fan', 'FAN18G0442' => 'fan', 'FAN18G1348' => 'fan', 'FAN19G2361' => 'fan', 'FAN20G0779' => 'fan', 'FAN23G0958' => 'fan', 'FAN24G2718' => 'fan', 'FAN26G2260' => 'fan', 'FAN27G3521' => 'fan', 'FAN28G0053' => 'fan', 'FAN28G1416' => 'fan', 'FvH4_1g03140' => 'fve', 'FvH4_2g29110' => 'fve', 'FvH4_5g11090' => 'fve', 'FvH4_6g16540' => 'fve', 'FvH4_6g29900' => 'fve', 'FvH4_7g18580' => 'fve', 'FvH4_7g18670' => 'fve', 'Glyma.03G184400' => 'gma', 'Glyma.04G067000' => 'gma', 'Glyma.06G068500' => 'gma', 'Glyma.07G030900' => 'gma', 'Glyma.08G211900' => 'gma', 'Glyma.10G207200' => 'gma', 'Glyma.13G166300' => 'gma', 'Glyma.13G365200' => 'gma', 'Glyma.14G116900' => 'gma', 'Glyma.15G008100' => 'gma', 'Glyma.17G114000' => 'gma', 'Glyma.17G210800' => 'gma', 'Glyma.20G183600' => 'gma', 'Gohir.A05G015900' => 'ghi', 'Gohir.A05G054100' => 'ghi', 'Gohir.A05G126000' => 'ghi', 'Gohir.A09G085100' => 'ghi', 'Gohir.A09G145700' => 'ghi', 'Gohir.A10G074100' => 'ghi', 'Gohir.A10G202100' => 'ghi', 'Gohir.A13G181750' => 'ghi', 'Gohir.D05G017000' => 'ghi', 'Gohir.D05G056900' => 'ghi', 'Gohir.D05G126900' => 'ghi', 'Gohir.D09G085050' => 'ghi', 'Gohir.D09G141600' => 'ghi', 'Gohir.D10G077200' => 'ghi', 'Gohir.D10G210300' => 'ghi', 'Gohir.D13G189500' => 'ghi', 'Gorai.006G101000' => 'gra', 'Gorai.006G162500' => 'gra', 'Gorai.009G017200' => 'gra', 'Gorai.009G057900' => 'gra', 'Gorai.009G131000' => 'gra', 'Gorai.011G083400' => 'gra', 'Gorai.011G162500' => 'gra', 'Gorai.011G235700' => 'gra', 'Gorai.013G215100' => 'gra', 'GSVIVG01015546001' => 'vvi', 'GSVIVG01016184001' => 'vvi', 'GSVIVG01017319001' => 'vvi', 'GSVIVG01033656001' => 'vvi', 'GSVIVG01035855001' => 'vvi', 'HanXRQChr01g0030851' => 'han', 'HanXRQChr02g0033241' => 'han', 'HanXRQChr02g0050501' => 'han', 'HanXRQChr06g0183161' => 'han', 'HanXRQChr07g0194711' => 'han', 'HanXRQChr08g0218411' => 'han', 'HanXRQChr09g0241991' => 'han', 'HanXRQChr13g0402921' => 'han', 'HanXRQChr14g0455741' => 'han', 'Haze_16543' => 'cav', 'Haze_16746' => 'cav', 'Haze_25565' => 'cav', 'Hma1.2p1_0018F.1_g012320' => 'hma', 'Hma1.2p1_0042F.1_g025550' => 'hma', 'Hma1.2p1_0043F.1_g025790' => 'hma', 'Hma1.2p1_0838F.1_g226270' => 'hma', 'Hma1.2p1_1903F.1_g307100' => 'hma', 'HPP92_005032' => 'vpl', 'HPP92_008169' => 'vpl', 'HPP92_008501' => 'vpl', 'HPP92_023157' => 'vpl', 'Hund04524' => 'sun', 'Hund06565' => 'sun', 'Hund09251' => 'sun', 'Hund25805' => 'sun', 'Lalb_Chr01g0012391' => 'lal', 'Lalb_Chr02g0152041' => 'lal', 'Lalb_Chr02g0155771' => 'lal', 'Lalb_Chr04g0262401' => 'lal', 'Lalb_Chr11g0063751' => 'lal', 'Lalb_Chr11g0072171' => 'lal', 'Lalb_Chr12g0197981' => 'lal', 'Lalb_Chr13g0301811' => 'lal', 'Lalb_Chr22g0361491' => 'lal', 'Lalb_Chr23g0268541' => 'lal', 'Lalb_Chr23g0275391' => 'lal', 'Lalb_Chr24g0402181' => 'lal', 'Lalb_Chr25g0279381' => 'lal', 'Lalb_Chr25g0288941' => 'lal', 'Lj1g0003538' => 'lja', 'Lj3g0008418' => 'lja', 'Lj3g0011504' => 'lja', 'Lj4g0026689' => 'lja', 'Lj5A71T72' => 'lonja', 'Lj5g0000755' => 'lja', 'Lj5g0012592' => 'lja', 'Lj7A422T35' => 'lonja', 'Lj9A500T85' => 'lonja', 'Lju15449C0G1' => 'lonja', 'Lju926C10T8' => 'lonja', 'Lsat_1_v5_gn_1_33301' => 'lsa', 'Lsat_1_v5_gn_1_43360' => 'lsa', 'Lsat_1_v5_gn_2_108540' => 'lsa', 'Lsat_1_v5_gn_5_95340' => 'lsa', 'Lsat_1_v5_gn_7_45121' => 'lsa', 'Lsat_1_v5_gn_8_20901' => 'lsa', 'Manes.03G015200' => 'mes', 'Manes.04G113700' => 'mes', 'Manes.06G057901' => 'mes', 'Manes.07G133128' => 'mes', 'Manes.09G064700' => 'mes', 'Manes.11G055800' => 'mes', 'Manes.16G121700' => 'mes', 'Mapoly0042s0032' => 'mpo', 'MBI01_g45310_MAGBIO' => 'mbi', 'MBI04_g24599_MAGBIO' => 'mbi', 'MD01G1102400' => 'mdo', 'MD02G1030400' => 'mdo', 'MD04G1091600' => 'mdo', 'MD08G1149800' => 'mdo', 'MD09G1232100' => 'mdo', 'MD12G1109500' => 'mdo', 'MD15G1125100' => 'mdo', 'MD15G1171900' => 'mdo', 'MD15G1172000' => 'mdo', 'MD17G1209500' => 'mdo', 'Medtr1g012480' => 'mtr', 'Medtr1g094145' => 'mtr', 'Medtr3g107310' => 'mtr', 'Medtr4g010330' => 'mtr', 'Medtr4g114620' => 'mtr', 'Medtr7g102240' => 'mtr', 'MELO3C009366.2' => 'cme', 'MELO3C010336.2' => 'cme', 'MELO3C017884.2' => 'cme', 'MELO3C019831.2' => 'cme', 'MELO3C023417.2' => 'cme', 'MELO3C027143.2' => 'cme', 'MELO3C031378.2' => 'cme', 'MELO3C034439.2' => 'cme', 'Migut.A00046' => 'egut', 'Migut.D01068' => 'egut', 'Migut.F01704' => 'egut', 'Migut.F01950' => 'egut', 'Migut.I00775' => 'egut', 'Migut.K00448' => 'egut', 'Migut.L01712' => 'egut', 'MSTRG.11620' => 'ama', 'MSTRG.22738' => 'ama', 'MSTRG.26004' => 'ama', 'MSTRG.26420' => 'ama', 'MSTRG.27491' => 'ama', 'MSTRG.391' => 'ama', 'MSTRG.4710' => 'ama', 'MSTRG.8130' => 'ama', 'MSTRG.9429' => 'ama', 'Nitab4.5_0000109g0280' => 'nta', 'Nitab4.5_0000209g0130' => 'nta', 'Nitab4.5_0000373g0040' => 'nta', 'Nitab4.5_0001450g0170' => 'nta', 'Nitab4.5_0005011g0060' => 'nta', 'Nitab4.5_0007034g0030' => 'nta', 'Nitab4.5_0008227g0010' => 'nta', 'Nitab4.5_0008266g0020' => 'nta', 'Nn2g12047' => 'nnu', 'Nn2g13819' => 'nnu', 'Nn8g39467' => 'nnu', 'Oeu010013.1' => 'oeu', 'Oeu020918.1' => 'oeu', 'Oeu033457.2' => 'oeu', 'Oeu046640.1' => 'oeu', 'Oeu052495.2' => 'oeu', 'Oeu058049.1' => 'oeu', 'Oeu058750.1' => 'oeu', 'Os01g0172300' => 'osa', 'Os07g0479600' => 'osa', 'Peaxi162Scf00046g00623' => 'pax', 'Peaxi162Scf00073g01611' => 'pax', 'Peaxi162Scf00145g00103' => 'pax', 'Peaxi162Scf00207g00634' => 'pax', 'Peaxi162Scf00332g00755' => 'pax', 'Peaxi162Scf00643g00325' => 'pax', 'PGR030G0001' => 'pgr', 'PGR031G0312' => 'pgr', 'PGR044G1083' => 'pgr', 'PGR102G0081' => 'pgr', 'PGR102G1662' => 'pgr', 'PGR142G1006' => 'pgr', 'PGSC0003DMG400000616' => 'stu', 'PGSC0003DMG400015856' => 'stu', 'PGSC0003DMG400019892' => 'stu', 'PGSC0003DMG400028536' => 'stu', 'PGSC0003DMG400031067' => 'stu', 'PGSC0003DMG401020462' => 'stu', 'PGSC0003DMG402020462' => 'stu', 'Phvul.001G051400' => 'pvu', 'Phvul.003G165400' => 'pvu', 'Phvul.005G177601' => 'pvu', 'Phvul.007G099500' => 'pvu', 'Phvul.007G148400' => 'pvu', 'Phvul.009G093300' => 'pvu', 'Phvul.010G155200' => 'pvu', 'Potri.001G192700' => 'ptr', 'Potri.006G068600' => 'ptr', 'Potri.006G254000' => 'ptr', 'Potri.008G034600' => 'ptr', 'Potri.010G227800' => 'ptr', 'Potri.018G027800' => 'ptr', 'Potri.018G130900' => 'ptr', 'Pp3c12_12010' => 'ppa', 'Pp3c15_13560' => 'ppa', 'Pp3c24_18340' => 'ppa', 'Pp3c24_19810' => 'ppa', 'Pp3c9_10820' => 'ppa', 'Prupe.1G480600' => 'ppe', 'Prupe.2G208000' => 'ppe', 'Prupe.3G085100' => 'ppe', 'Prupe.7G128200' => 'ppe', 'Prupe.7G244100' => 'ppe', 'Psat0s2233g0040' => 'psa', 'Psat3g041840' => 'psa', 'Psat4g038720' => 'psa', 'Psat6g029280' => 'psa', 'Psat6g180240' => 'psa', 'Psat7g255520' => 'psa', 'PSO170G3766' => 'pso', 'PSO210G0452' => 'pso', 'PSO210G2270' => 'pso', 'PSO339G1843' => 'pso', 'PSO455G0263' => 'pso', 'PSO801G0696' => 'pso', 'QL02p021797' => 'qlo', 'QL02p088675' => 'qlo', 'QL05p029500' => 'qlo', 'QL07p043032' => 'qlo', 'RcHm_v2.0_Chr1g0362401' => 'rch', 'RcHm_v2.0_Chr2g0088261' => 'rch', 'RcHm_v2.0_Chr2g0102501' => 'rch', 'RcHm_v2.0_Chr2g0135801' => 'rch', 'RcHm_v2.0_Chr3g0470451' => 'rch', 'RcHm_v2.0_Chr6g0297991' => 'rch', 'Rhsim02G0200400' => 'rsi', 'Rhsim03G0115500' => 'rsi', 'Rhsim07G0157600' => 'rsi', 'Rhsim08G0213900' => 'rsi', 'Rhsim12G0192000' => 'rsi', 'Sabra01G0149400' => 'sbr', 'Sabra06G0051100' => 'sbr', 'Sabra06G0198400' => 'sbr', 'Sabra08G0023000' => 'sbr', 'Sabra10G0175700' => 'sbr', 'Sabra18G0030100' => 'sbr', 'Sabra18G0111100' => 'sbr', 'SalBow1G8264' => 'sbo', 'SalBow2G2843' => 'sbo', 'SalBow4G2216' => 'sbo', 'SalBow6G5875' => 'sbo', 'SalBow6G6675' => 'sbo', 'Sc09g0006020' => 'sci', 'Sc09g0008290' => 'sci', 'Sc10g0005870' => 'sci', 'Sc18g0000540' => 'sci', 'Sc23g0006760' => 'sci', 'Sed0001611' => 'sed', 'Sed0002657' => 'sed', 'Sed0003549' => 'sed', 'Sed0009153' => 'sed', 'Sed0014644' => 'sed', 'Sed0016755' => 'sed', 'Sed0017081' => 'sed', 'Sed0024035' => 'sed', 'Sed0024763' => 'sed', 'Sed0025146' => 'sed', 'Sed0027171' => 'sed', 'SEGI_21729' => 'sgi', 'SEGI_38996' => 'sgi', 'SGA_v2.0_scaffold16G07599' => 'sas', 'SGA_v2.0_scaffold20G09133' => 'sas', 'SGA_v2.0_scaffold2G01348' => 'sas', 'SGA_v2.0_scaffold37G14774' => 'sas', 'SGA_v2.0_scaffold5G02685' => 'sas', 'SGA_v2.0_scaffold64G21921' => 'sas', 'SHI18563' => 'shi', 'SHI39604' => 'shi', 'Solyc03g116640.4' => 'sly', 'Solyc06g066050.3' => 'sly', 'Solyc06g068120.4' => 'sly', 'Solyc07g008260.3' => 'sly', 'Solyc08g060860.3' => 'sly', 'Solyc11g008270.2' => 'sly', 'Sopen03g035560' => 'spe', 'Sopen06g024530' => 'spe', 'Sopen06g025390' => 'spe', 'Sopen07g004150' => 'spe', 'Sopen08g015990' => 'spe', 'Sopen11g004080' => 'spe', 'Sp1g13670' => 'spa', 'Sp2g22180' => 'spa', 'Sp5g07545' => 'spa', 'Sp6g39300' => 'spa', 'Sp7g30110' => 'spa', 'TAR623G0634' => 'tar', 'TAR625G0466' => 'tar', 'TAR626G0003' => 'tar', 'TAR626G0575' => 'tar', 'TAR636G0421' => 'tar', 'THA.LOC104799233' => 'tha', 'THA.LOC104803836' => 'tha', 'THA.LOC104808233' => 'tha', 'THA.LOC104810505' => 'tha', 'THA.LOC104813566' => 'tha', 'THA.LOC104815019' => 'tha', 'THA.LOC104816354' => 'tha', 'THA.LOC104826338' => 'tha', 'THA.LOC109117269' => 'tha', 'Thecc.05G069100' => 'tca', 'Thecc.06G021800' => 'tca', 'Thecc.09G025600' => 'tca', 'Thecc.09G127600' => 'tca', 'Thecc.10G085800' => 'tca', 'Thhalv10005028m.g' => 'esa', 'Thhalv10009002m.g' => 'esa', 'Thhalv10010843m.g' => 'esa', 'Thhalv10015115m.g' => 'esa', 'Thhalv10027435m.g' => 'esa', 'TPR.G10284' => 'tpr', 'TPR.G15670' => 'tpr', 'TPR.G26491' => 'tpr', 'TPR.G27878' => 'tpr', 'TPR.G3102' => 'tpr', 'TPR.G32844' => 'tpr', 'TPR.G39849' => 'tpr', 'TWI12G0944' => 'twi', 'TWI18G1185' => 'twi', 'TWI34G0680' => 'twi', 'TWI34G1672' => 'twi', 'TWI53G1876' => 'twi', 'TWI63G0836' => 'twi', 'TWI75G1017' => 'twi', 'unitig_32.g10917' => 'ugi', 'unitig_32.g10918' => 'ugi', 'unitig_37.g12316' => 'ugi', 'unitig_46.g18607' => 'ugi', 'unitig_748.g8222' => 'ugi', 'vmacro05180' => 'vma', 'vmacro07119' => 'vma', 'vmacro11168' => 'vma', 'vmacro16777' => 'vma', 'vmacro16902' => 'vma', 'vmacro18990' => 'vma', 'vmacro20566' => 'vma', 'VMungo0331G1772' => 'vmu', 'VMungo0647G1948' => 'vmu', 'VMungo0720G0751' => 'vmu', 'VMungo0720G2153' => 'vmu', 'VMungo1215G2941' => 'vmu', 'VMungo1309G0976' => 'vmu', 'Zm00001eb104950' => 'zma', 'Zm00001eb205770' => 'zma', 'Zm00001eb235790' => 'zma', 'Zm00001eb321350' => 'zma', 'Zm00001eb336750' => 'zma', 'Zm00001eb386330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001011' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001011' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001011' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001011' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151