Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C008463.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.5e-97 358.2 172 100.0
MELO3C010063.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.8e-22 109.4 76 64.5
MELO3C033629.2 Cucumis melo HOM05D001651 ORTHO05D009716 4.7e-17 92.0 69 58.0
MELO3C035564.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.9e-17 91.3 59 62.7
MELO3C030196.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.0e-16 90.9 64 59.4
MELO3C035586.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.0e-16 90.9 64 59.4
MELO3C027597.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-16 90.5 64 57.8
MELO3C032795.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-16 90.5 60 65.0
MELO3C033188.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.9e-16 89.0 59 66.1
MELO3C029732.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.7e-16 88.2 72 54.2
MELO3C028455.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-15 87.4 59 62.7
MELO3C030525.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.5e-15 87.0 49 71.4
MELO3C033211.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.5e-15 87.0 58 62.1
MELO3C035430.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.5e-15 87.0 81 49.4
MELO3C031381.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.6e-15 86.3 55 67.3
MELO3C035042.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.3e-15 85.9 63 60.3
MELO3C013106.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.4e-15 85.5 78 44.9
MELO3C028435.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.4e-15 85.5 59 61.0
MELO3C035151.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.7e-15 85.1 82 42.7
MELO3C029156.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.7e-15 84.3 64 56.2
MELO3C031504.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-14 84.0 59 61.0
MELO3C008276.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.2e-14 83.2 67 52.2
MELO3C035126.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.2e-14 83.2 59 62.7
MELO3C030921.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.8e-14 82.8 58 58.6
MELO3C030947.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.8e-14 82.8 69 56.5
MELO3C033795.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.8e-14 82.8 49 67.3
MELO3C034476.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.8e-14 82.8 49 69.4
MELO3C032022.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-14 82.4 73 52.1
MELO3C033377.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-14 82.4 59 61.0
MELO3C033868.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-14 82.4 59 62.7
MELO3C035680.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.7e-14 82.4 49 67.3
MELO3C029207.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.8e-14 82.0 59 61.0
MELO3C035045.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.8e-14 82.0 49 67.3
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 6.3e-14 81.6 63 49.2
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 6.3e-14 81.6 63 49.2
MELO3C031500.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.3e-14 81.6 73 49.3
MELO3C034623.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.3e-14 81.6 55 63.6
MELO3C030906.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.2e-14 81.3 64 53.1
MELO3C002765.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-13 80.9 60 58.3
MELO3C035588.2 Cucumis melo HOM05D001651 ORTHO05D009716 1.1e-13 80.9 70 52.9
CANSAT64G1414 Cannabis sativa HOM05D001651 ORTHO05D000277 1.4e-13 80.5 109 33.0
MELO3C008893.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-13 80.5 53 64.2
MELO3C029065.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-13 80.5 49 65.3
MELO3C031251.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-13 80.5 59 61.0
MELO3C008748.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.8e-13 80.1 110 33.6
MELO3C030691.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.4e-13 79.7 53 60.4
MELO3C033906.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.4e-13 79.7 49 63.3
MELO3C031238.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.1e-13 79.3 68 47.1
MELO3C028082.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.1e-13 79.0 49 63.3
MELO3C029219.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.1e-13 79.0 55 60.0
MELO3C032144.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.1e-13 79.0 55 63.6
MELO3C032206.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.1e-13 79.0 49 63.3
MELO3C035147.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.1e-13 79.0 59 61.0
Sed0008442 Sechium edule HOM05D001651 ORTHO05D000277 4.1e-13 79.0 59 55.9
CANSAT80G1436 Cannabis sativa HOM05D001651 ORTHO05D000277 5.3e-13 78.6 109 33.0
MELO3C026040.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.9e-13 78.2 64 53.1
MELO3C028669.2 Cucumis melo HOM05D001651 ORTHO05D009716 6.9e-13 78.2 59 52.5
MELO3C032240.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.9e-13 78.2 49 61.2
MELO3C032742.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.9e-13 78.2 49 61.2
MELO3C033442.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.9e-13 78.2 49 63.3
MELO3C035327.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.9e-13 78.2 59 57.6
MELO3C029091.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.1e-13 77.8 102 39.2
MELO3C033016.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.1e-13 77.8 67 44.8
MELO3C033417.2 Cucumis melo HOM05D001651 ORTHO05D009716 9.1e-13 77.8 49 63.3
MELO3C034256.2 Cucumis melo HOM05D001651 ORTHO05D000277 9.1e-13 77.8 49 65.3
MELO3C019042.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-12 77.4 64 46.9
MELO3C030792.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-12 77.4 45 68.9
MELO3C032644.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-12 77.4 83 45.8
MELO3C034777.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-12 77.4 49 61.2
Sed0005845 Sechium edule HOM05D001651 ORTHO05D000277 1.5e-12 77.0 64 51.6
MELO3C032220.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.0e-12 76.6 49 61.2
MELO3C034529.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.0e-12 76.6 43 67.4
MELO3C032059.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.6e-12 76.3 49 63.3
Sed0005282 Sechium edule HOM05D001651 ORTHO05D000277 2.6e-12 76.3 61 49.2
Sed0005563 Sechium edule HOM05D001651 ORTHO05D000277 3.4e-12 75.9 49 61.2
MELO3C033877.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.5e-12 75.5 50 64.0
MELO3C035660.2 Cucumis melo HOM05D001651 ORTHO05D000277 4.5e-12 75.5 47 63.8
Sed0005350 Sechium edule HOM05D001651 ORTHO05D000277 4.5e-12 75.5 48 58.3
MELO3C030189.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.7e-12 74.7 49 63.3
MELO3C031993.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.7e-12 74.7 58 51.7
MELO3C035642.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.7e-12 74.7 49 61.2
MELO3C031433.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.0e-11 74.3 64 50.0
MELO3C004976.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-11 73.6 50 60.0
MELO3C005119.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.7e-11 73.6 90 40.0
MELO3C015092.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.2e-11 73.2 69 47.8
MELO3C035570.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.2e-11 73.2 85 45.9
MELO3C027706.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.9e-11 72.8 50 60.0
MELO3C029869.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.9e-11 72.8 47 61.7
MELO3C033492.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.9e-11 72.8 57 56.1
MELO3C033818.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.8e-11 72.4 49 57.1
CANSAT35G1292 Cannabis sativa HOM05D001651 ORTHO05D000277 5.0e-11 72.0 77 39.0
MELO3C028665.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.0e-11 72.0 125 30.4
MELO3C032606.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.9e-10 70.1 49 57.1
MELO3C012907.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.2e-10 69.3 59 49.2
arahy.Tifrunner.gnm1.ann1.E2D6CJ Arachis hypogaea HOM05D001651 ORTHO05D000277 4.2e-10 68.9 123 30.9
FvH4_1g28531 Fragaria vesca HOM05D000034 ORTHO05D000277 4.2e-10 68.9 45 62.2
FAN19G2232 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.2e-10 68.9 45 62.2
Sed0003700 Sechium edule HOM05D000034 ORTHO05D000277 4.2e-10 68.9 49 61.2
arahy.Tifrunner.gnm1.ann1.VKU54N Arachis hypogaea HOM05D001651 ORTHO05D000277 5.5e-10 68.6 123 30.9
MELO3C011581.2 Cucumis melo HOM05D001651 ORTHO05D000277 5.5e-10 68.6 54 51.9
ClCG01G009750 Citrullus lanatus HOM05D001651 ORTHO05D000277 7.2e-10 68.2 53 49.1
MELO3C035116.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.2e-10 68.2 42 64.3
Sed0007178 Sechium edule HOM05D001651 ORTHO05D000277 7.2e-10 68.2 49 55.1
arahy.Tifrunner.gnm1.ann1.Q82TWL Arachis hypogaea HOM05D001651 ORTHO05D000277 9.4e-10 67.8 123 30.1
arahy.Tifrunner.gnm1.ann1.CJ0Q0H Arachis hypogaea HOM05D001651 ORTHO05D000277 1.2e-09 67.4 58 48.3
arahy.Tifrunner.gnm1.ann1.FE068N Arachis hypogaea HOM05D001651 ORTHO05D000277 1.2e-09 67.4 123 30.9
MELO3C024858.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.2e-09 67.4 58 51.7
CsaV3_5G023560 Cucumis sativus L. HOM05D001651 ORTHO05D000277 1.2e-09 67.4 54 50.0
arahy.Tifrunner.gnm1.ann1.3RQC98 Arachis hypogaea HOM05D001651 ORTHO05D000277 1.6e-09 67.0 123 30.1
arahy.Tifrunner.gnm1.ann1.4HXN36 Arachis hypogaea HOM05D001651 ORTHO05D000277 2.1e-09 66.6 123 30.9
arahy.Tifrunner.gnm1.ann1.LUU7A8 Arachis hypogaea HOM05D001651 ORTHO05D000277 2.1e-09 66.6 123 30.1
MELO3C031510.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.7e-09 66.2 71 40.8
Atru.chr10.926 Acer truncatum HOM05D001651 ORTHO05D000277 3.6e-09 65.9 63 39.7
MELO3C031481.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.6e-09 65.9 41 61.0
Manes.03G068716 Manihot esculenta HOM05D001651 ORTHO05D000277 3.6e-09 65.9 61 42.6
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 4.7e-09 65.5 60 46.7
MELO3C032207.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.0e-09 64.7 57 52.6
DCAR_011368 Daucus carota HOM05D001651 ORTHO05D000277 8.0e-09 64.7 60 46.7
DCAR_011369 Daucus carota HOM05D001651 ORTHO05D000277 8.0e-09 64.7 60 46.7
arahy.Tifrunner.gnm1.ann1.497TK4 Arachis hypogaea HOM05D001651 ORTHO05D000277 1.0e-08 64.3 56 46.4
Prupe.4G257700 Prunus persica HOM05D000034 ORTHO05D000277 1.0e-08 64.3 62 41.9
Sed0003532 Sechium edule HOM05D001651 ORTHO05D000277 1.0e-08 64.3 109 32.1
arahy.Tifrunner.gnm1.ann1.H4V5XP Arachis hypogaea HOM05D001651 ORTHO05D000277 1.4e-08 63.9 75 37.3
MELO3C029074.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-08 63.9 38 65.8
MELO3C032758.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.4e-08 63.9 58 46.6
Dinv15457 Davidia involucrata HOM05D000603 ORTHO05D002962 1.4e-08 63.9 95 32.6
Nn1g01000 Nelumbo nucifera HOM05D001651 ORTHO05D000277 1.4e-08 63.9 71 39.4
Sed0017352 Sechium edule HOM05D001651 ORTHO05D000277 1.4e-08 63.9 57 47.4
MELO3C028964.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.8e-08 63.5 49 59.2
FAN12G2533 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.8e-08 63.5 55 47.3
ClCG09G011690 Citrullus lanatus HOM05D001651 ORTHO05D000277 2.3e-08 63.2 49 55.1
MELO3C020687.2 Cucumis melo HOM05D001651 ORTHO05D000277 2.3e-08 63.2 51 58.8
MELO3C033170.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.9e-08 62.4 53 52.8
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 3.9e-08 62.4 60 43.3
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 3.9e-08 62.4 60 43.3
RcHm_v2.0_Chr7g0205671 Rosa chinensis HOM05D001651 ORTHO05D000277 3.9e-08 62.4 45 53.3
arahy.Tifrunner.gnm1.ann1.C6IU4G Arachis hypogaea HOM05D001651 ORTHO05D000277 5.2e-08 62.0 75 36.0
arahy.Tifrunner.gnm1.ann1.7ADW8G Arachis hypogaea HOM05D001651 ORTHO05D000277 6.7e-08 61.6 106 33.0
CANSAT56G0820 Cannabis sativa HOM05D001651 ORTHO05D000277 6.7e-08 61.6 47 51.1
arahy.Tifrunner.gnm1.ann1.ZKDC23 Arachis hypogaea HOM05D001651 ORTHO05D000277 8.8e-08 61.2 123 29.3
MELO3C031509.2 Cucumis melo HOM05D001651 ORTHO05D000277 8.8e-08 61.2 49 53.1
RcHm_v2.0_Chr6g0284621 Rosa chinensis HOM05D000034 ORTHO05D000277 8.8e-08 61.2 62 43.5
arahy.Tifrunner.gnm1.ann1.PYZ8NF Arachis hypogaea HOM05D001651 ORTHO05D000277 1.1e-07 60.8 75 36.0
MELO3C028011.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-07 60.8 36 63.9
MELO3C029657.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.1e-07 60.8 59 52.5
Medtr3g075160 Medicago truncatula HOM05D000034 ORTHO05D000277 1.1e-07 60.8 113 32.7
RcHm_v2.0_Chr6g0274461 Rosa chinensis HOM05D000034 ORTHO05D000277 1.1e-07 60.8 62 43.5
TPR.G21616 Trifolium pratense HOM05D001651 ORTHO05D000277 1.1e-07 60.8 63 42.9
Ah.08g221600 Amaranthus hybridus HOM05D000034 ORTHO05D000277 2.0e-07 60.1 45 53.3
arahy.Tifrunner.gnm1.ann1.0HEE39 Arachis hypogaea HOM05D001651 ORTHO05D000277 2.6e-07 59.7 58 41.4
MELO3C035001.2 Cucumis melo HOM05D001651 ORTHO05D000277 3.3e-07 59.3 47 51.1
arahy.Tifrunner.gnm1.ann1.8B899F Arachis hypogaea HOM05D001651 ORTHO05D000277 4.4e-07 58.9 58 43.1
Psat3g065920 Pisum sativum HOM05D001651 ORTHO05D000277 4.4e-07 58.9 58 39.7
TPR.G13250 Trifolium pratense HOM05D001651 ORTHO05D000277 4.4e-07 58.9 62 37.1
Sed0007091 Sechium edule HOM05D001651 ORTHO05D000277 5.7e-07 58.5 44 50.0
MELO3C031965.2 Cucumis melo HOM05D001651 ORTHO05D000277 7.4e-07 58.2 59 50.8
Medtr0697s0010 Medicago truncatula HOM05D000034 ORTHO05D000277 9.7e-07 57.8 47 48.9
MELO3C033145.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.3e-06 57.4 59 44.1
Nn5g27284 Nelumbo nucifera HOM05D001651 ORTHO05D000277 1.3e-06 57.4 48 45.8
Thecc.05G132700 Theobroma cacao HOM05D001651 ORTHO05D000277 1.3e-06 57.4 58 37.9
AUR62038760 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.7e-06 57.0 59 42.4
EL10Ac3g06859 Beta vulgaris HOM05D000034 ORTHO05D012199 2.2e-06 56.6 53 45.3
EL10Ac9g22471 Beta vulgaris HOM05D000034 ORTHO05D000277 2.2e-06 56.6 53 45.3
RcHm_v2.0_Chr5g0072391 Rosa chinensis HOM05D000034 ORTHO05D000277 2.2e-06 56.6 62 40.3
EL10Ac1g00510 Beta vulgaris HOM05D000034 ORTHO05D000277 2.8e-06 56.2 45 48.9
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.8e-06 56.2 55 41.8
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-06 56.2 70 31.4
Sed0021191 Sechium edule HOM05D001651 ORTHO05D000277 3.7e-06 55.8 48 43.8
arahy.Tifrunner.gnm1.ann1.M5L10V Arachis hypogaea HOM05D001651 ORTHO05D000277 4.8e-06 55.5 47 44.7
RcHm_v2.0_Chr1g0343671 Rosa chinensis HOM05D000034 ORTHO05D000277 4.8e-06 55.5 60 40.0
AUR62031342 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.3e-06 55.1 87 32.2
EL10Ac7g17113 Beta vulgaris HOM05D000034 ORTHO05D000277 8.2e-06 54.7 45 46.7


User provided reference genes

Program Settings