Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003388.2 Cucumis melo HOM05D006113 ORTHO05D007828 1.9e-65 252.3 124 100.0
MELO3C003389.2 Cucumis melo HOM05D006113 ORTHO05D007828 3.3e-25 118.6 94 64.9
CsaV3_3G049370 Cucumis sativus L. HOM05D006113 ORTHO05D007828 3.3e-25 118.6 94 64.9
ClCG09G012180 Citrullus lanatus HOM05D006113 ORTHO05D007828 2.2e-24 115.9 94 63.8
Sed0027774 Sechium edule HOM05D006113 ORTHO05D007828 4.1e-23 111.7 94 60.6
CANSAT21G0754 Cannabis sativa HOM05D006113 ORTHO05D007828 7.7e-22 107.5 94 56.4
RcHm_v2.0_Chr6g0269051 Rosa chinensis HOM05D006113 ORTHO05D007828 2.7e-19 99.0 107 48.6
Ciclev10031360m.g Citrus clementina HOM05D006113 ORTHO05D007828 4.7e-19 98.2 94 51.1
QL12p006235 Quercus lobata HOM05D006113 ORTHO05D007828 1.4e-18 96.7 88 58.0
CSS0010269 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 2.3e-18 95.9 94 51.1
FAN09G0007 Fragaria x ananassa HOM05D006113 ORTHO05D007828 2.3e-18 95.9 94 52.1
Prupe.1G552500 Prunus persica HOM05D006113 ORTHO05D007828 3.0e-18 95.5 89 57.3
MD09G1232600 Malus domestica HOM05D006113 ORTHO05D007828 4.0e-18 95.1 89 56.2
Eucgr.E00301 Eucalyptus grandis HOM05D006113 ORTHO05D007828 5.2e-18 94.7 99 46.5
FAN02G2000 Fragaria x ananassa HOM05D006113 ORTHO05D007828 5.2e-18 94.7 107 47.7
FvH4_6g31710 Fragaria vesca HOM05D006113 ORTHO05D007828 6.8e-18 94.4 94 52.1
FAN05G0306 Fragaria x ananassa HOM05D006113 ORTHO05D007828 6.8e-18 94.4 94 52.1
Hund14417 Selenicereus undatus HOM05D006113 ORTHO05D007828 6.8e-18 94.4 96 51.0
HanXRQChr06g0167341 Helianthus annuus HOM05D006113 ORTHO05D007828 1.2e-17 93.6 98 49.0
Thecc.03G231000 Theobroma cacao HOM05D006113 ORTHO05D007828 1.2e-17 93.6 94 46.8
Dinv28932 Davidia involucrata HOM05D006113 ORTHO05D007828 1.5e-17 93.2 94 51.1
CAN.G845.35 Capsicum annuum HOM05D006113 ORTHO05D007828 2.0e-17 92.8 102 44.1
CiPaw.11G091200 Carya illinoinensis HOM05D006113 ORTHO05D007828 2.0e-17 92.8 94 51.1
Potri.003G089700 Populus trichocarpa HOM05D006113 ORTHO05D007828 2.0e-17 92.8 96 50.0
Rhsim07G0124800 Rhododendron simsii HOM05D006113 ORTHO05D007828 2.0e-17 92.8 101 45.5
PGR042G1735 Punica granatum HOM05D006113 ORTHO05D007828 2.6e-17 92.4 97 50.5
CSS0019238 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 3.4e-17 92.0 94 48.9
CSS0023186 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 3.4e-17 92.0 94 48.9
COL.COLO4_17073 Corchorus olitorius HOM05D006113 ORTHO05D007828 4.4e-17 91.7 94 47.9
Lsat_1_v5_gn_3_16601 Lactuca sativa HOM05D006113 ORTHO05D007828 4.4e-17 91.7 104 45.2
Peaxi162Scf00102g00639 Petunia axillaris HOM05D006113 ORTHO05D007828 4.4e-17 91.7 102 44.1
Potri.001G144500 Populus trichocarpa HOM05D006113 ORTHO05D007828 5.7e-17 91.3 96 49.0
vmacro14161 Vaccinium macrocarpon HOM05D006113 ORTHO05D007828 1.3e-16 90.1 101 45.5
Cc08_g02430 Coffea canephora HOM05D006113 ORTHO05D007828 1.7e-16 89.7 94 46.8
Atru.chr6.1754 Acer truncatum HOM05D006113 ORTHO05D007828 2.8e-16 89.0 94 47.9
DCAR_008285 Daucus carota HOM05D006113 ORTHO05D007828 2.8e-16 89.0 95 47.4
Nitab4.5_0000804g0060 Nicotiana tabacum HOM05D006113 ORTHO05D007828 2.8e-16 89.0 92 48.9
Ca_24644_v3 Cicer arietinum L. HOM05D006113 ORTHO05D007828 3.7e-16 88.6 111 48.6
ECA246G3200 Erigeron canadensis HOM05D006113 ORTHO05D007828 3.7e-16 88.6 102 47.1
Migut.E01131 Erythranthe guttata HOM05D006113 ORTHO05D007828 3.7e-16 88.6 96 46.9
Solyc08g007010.4 Solanum lycopersicum HOM05D006113 ORTHO05D007828 3.7e-16 88.6 102 43.1
Sopen08g002980 Solanum pennellii HOM05D006113 ORTHO05D007828 3.7e-16 88.6 102 43.1
Sabra01G0112900 Salix brachista HOM05D006113 ORTHO05D007828 4.8e-16 88.2 96 47.9
PGSC0003DMG400020501 Solanum tuberosum HOM05D006113 ORTHO05D007828 4.8e-16 88.2 102 43.1
Haze_08267 Corylus avellana HOM05D006113 ORTHO05D007828 6.3e-16 87.8 92 53.3
Lj8A291G57 Lonicera japonica HOM05D006113 ORTHO05D007828 8.3e-16 87.4 71 62.0
Nitab4.5_0000535g0010 Nicotiana tabacum HOM05D006113 ORTHO05D007828 8.3e-16 87.4 92 47.8
Cfa012411 Carpinus fangiana HOM05D006113 ORTHO05D007828 1.8e-15 86.3 88 54.5
Duzib205G1867 Durio zibethinus HOM05D006113 ORTHO05D007828 1.8e-15 86.3 94 45.7
TWI60G1370 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 1.8e-15 86.3 98 46.9
Gohir.D08G178600 Gossypium hirsutum HOM05D006113 ORTHO05D007828 2.4e-15 85.9 107 41.1
Gorai.004G186900 Gossypium raimondii HOM05D006113 ORTHO05D007828 2.4e-15 85.9 107 41.1
Oeu062745.2 Olea europaea HOM05D006113 ORTHO05D007828 3.1e-15 85.5 111 45.0
TPR.G17447 Trifolium pratense HOM05D006113 ORTHO05D007828 3.1e-15 85.5 97 47.4
arahy.Tifrunner.gnm1.ann1.C9Y7N1 Arachis hypogaea HOM05D006113 ORTHO05D007828 4.1e-15 85.1 108 43.5
arahy.Tifrunner.gnm1.ann1.LSM77P Arachis hypogaea HOM05D006113 ORTHO05D007828 4.1e-15 85.1 108 43.5
Gohir.A08G158300 Gossypium hirsutum HOM05D006113 ORTHO05D007828 4.1e-15 85.1 104 42.3
MBI18_g17018_MAGBIO Magnolia biondii HOM05D006113 ORTHO05D007828 4.1e-15 85.1 95 49.5
TAR371G0010 Trochodendron aralioides HOM05D006113 ORTHO05D007828 4.1e-15 85.1 94 46.8
AUR62007248 Chenopodium quinoa HOM05D006113 ORTHO05D007828 5.4e-15 84.7 70 54.3
Ah.12g054610 Amaranthus hybridus HOM05D006113 ORTHO05D007828 7.0e-15 84.3 94 43.6
Manes.05G117026 Manihot esculenta HOM05D006113 ORTHO05D007828 7.0e-15 84.3 95 48.4
TWI81G0082 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 7.0e-15 84.3 97 45.4
AUR62018751 Chenopodium quinoa HOM05D006113 ORTHO05D007828 9.1e-15 84.0 70 54.3
Lalb_Chr05g0214021 Lupinus albus HOM05D006113 ORTHO05D007828 9.1e-15 84.0 108 42.6
GSVIVG01013180001 Vitis vinifera HOM05D006113 ORTHO05D007828 9.1e-15 84.0 94 46.8
SGA_v2.0_scaffold385G50460 Striga asiatica HOM05D006113 ORTHO05D007828 1.2e-14 83.6 109 41.3
EL10Ac1g02288 Beta vulgaris HOM05D006113 ORTHO05D007828 1.6e-14 83.2 113 42.5
HanXRQChr17g0535731 Helianthus annuus HOM05D006113 ORTHO05D007828 2.0e-14 82.8 105 42.9
MSTRG.12007 Avicennia marina HOM05D006113 ORTHO05D007828 2.7e-14 82.4 95 44.2
SalBow1G7584 Salvia bowleyana HOM05D006113 ORTHO05D007828 3.5e-14 82.0 71 54.9
Sc22g0001480 Simmondsia chinensis HOM05D006113 ORTHO05D007828 3.5e-14 82.0 96 47.9
Lj2g0019507 Lotus japonicus HOM05D006113 ORTHO05D007828 4.5e-14 81.6 110 46.4
PSO017G4443 Papaver somniferum HOM05D006113 ORTHO05D007828 5.9e-14 81.3 95 40.0
PSO478G3605 Papaver somniferum HOM05D006113 ORTHO05D007828 5.9e-14 81.3 94 40.4
Aqoxy3G00478 Aquilegia oxysepala HOM05D006113 ORTHO05D007828 7.7e-14 80.9 94 41.5
Os01g0127300 Oryza sativa ssp. japonica HOM05D006113 ORTHO05D007828 1.0e-13 80.5 113 38.9
Aa31LG2G13450 Aethionema arabicum HOM05D006113 ORTHO05D007828 2.2e-13 79.3 101 41.6
Cpa.g.sc90.55 Carica papaya HOM05D006113 ORTHO05D007828 3.8e-13 78.6 94 45.7
AL1G46750 Arabidopsis lyrata HOM05D006113 ORTHO05D007828 6.5e-13 77.8 101 38.6
Glyma.11G042400 Glycine max HOM05D006113 ORTHO05D007828 1.1e-12 77.0 111 41.4
BcaC05g27850 Brassica carinata HOM05D006113 ORTHO05D007828 1.5e-12 76.6 97 42.3
C05p38480 Brassica napus HOM05D006113 ORTHO05D007828 1.5e-12 76.6 97 42.3
BolC5t32582H Brassica oleracea HOM05D006113 ORTHO05D007828 1.5e-12 76.6 97 42.3
Nn3g17324 Nelumbo nucifera HOM05D006113 ORTHO05D007828 1.5e-12 76.6 111 41.4
Sp1g28400 Schrenkiella parvula HOM05D006113 ORTHO05D007828 1.5e-12 76.6 97 42.3
BcaB03g13726 Brassica carinata HOM05D006113 ORTHO05D007828 1.9e-12 76.3 97 43.3
CARHR031950 Cardamine hirsuta HOM05D006113 ORTHO05D007828 1.9e-12 76.3 101 39.6
THA.LOC104807962 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 2.5e-12 75.9 94 42.6
A05p24790 Brassica napus HOM05D006113 ORTHO05D007828 3.2e-12 75.5 97 42.3
BraA05t21362Z Brassica rapa HOM05D006113 ORTHO05D007828 3.2e-12 75.5 97 42.3
Carub.0001s3091 Capsella rubella HOM05D006113 ORTHO05D007828 3.2e-12 75.5 101 38.6
AT1G32500 Arabidopsis thaliana HOM05D006113 ORTHO05D007828 4.2e-12 75.1 101 38.6
THA.LOC104814434 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 4.2e-12 75.1 101 39.6
Thhalv10007401m.g Eutrema salsugineum HOM05D006113 ORTHO05D007828 7.2e-12 74.3 97 41.2
unitig_52.g17240 Utricularia gibba HOM05D006113 ORTHO05D007828 9.4e-12 73.9 97 38.1
Phvul.002G006200 Phaseolus vulgaris HOM05D006113 ORTHO05D007828 1.2e-11 73.6 112 42.0
CBR_g5705 Chara braunii HOM05D006113 ORTHO05D007828 6.1e-11 71.2 94 41.5
PSO478G2563 Papaver somniferum HOM05D006113 ORTHO05D007828 6.1e-11 71.2 100 36.0
VMungo1215G1026 Vigna mungo HOM05D006113 ORTHO05D007828 3.0e-10 68.9 97 43.3
CBR_g5706 Chara braunii HOM05D006113 ORTHO05D007828 4.0e-10 68.6 94 40.4
HPP92_003349 Vanilla planifolia HOM05D006113 ORTHO05D007828 1.2e-09 67.0 100 41.0
Glyma.01G199500 Glycine max HOM05D006113 ORTHO05D007828 5.7e-09 64.7 107 37.4
Medtr5g014290 Medicago truncatula HOM05D006113 ORTHO05D007828 1.7e-08 63.2 110 35.5
Psat2g173560 Pisum sativum HOM05D006113 ORTHO05D007828 1.7e-08 63.2 110 37.3
ATR0680G232 Amborella trichopoda HOM05D006113 ORTHO05D007828 2.8e-08 62.4 73 45.2
Mapoly0097s0089 Marchantia polymorpha HOM05D006113 ORTHO05D007828 3.7e-08 62.0 94 42.6
BcaC05g27849 Brassica carinata HOM05D006113 ORTHO05D007828 1.1e-07 60.5 62 46.8
AagrBONN_evm.TU.Sc2ySwM_228.790 Anthoceros agrestis HOM05D006113 ORTHO05D007828 2.0e-06 56.2 103 33.0
SEGI_13135 Sequoiadendron giganteum HOM05D006113 ORTHO05D007828 5.9e-06 54.7 94 35.1


User provided reference genes

Program Settings