Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000213.2 Cucumis melo HOM05D004885 ORTHO05D006124 3.1e-30 134.4 66 100.0
CsaV3_3G000260 Cucumis sativus L. HOM05D004885 ORTHO05D006124 7.2e-27 123.2 66 90.9
ClCG10G000240 Citrullus lanatus HOM05D004885 ORTHO05D006124 1.4e-25 119.0 65 87.7
Sed0002359 Sechium edule HOM05D004885 ORTHO05D006124 2.8e-15 84.7 65 63.1
Dinv08168 Davidia involucrata HOM05D004885 ORTHO05D006124 2.5e-11 71.6 63 52.4
Actinidia22902 Actinidia chinensis HOM05D004885 ORTHO05D006124 3.3e-11 71.2 63 54.0
CSS0014238 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 5.6e-11 70.5 63 54.0
Dinv40183 Davidia involucrata HOM05D004885 ORTHO05D006124 1.6e-10 68.9 63 50.8
Atru.chr4.1890 Acer truncatum HOM05D004885 ORTHO05D006124 2.1e-10 68.6 63 50.8
TWI09G0982 Tripterygium wilfordii HOM05D004885 ORTHO05D006124 2.8e-10 68.2 68 50.0
vmacro18463 Vaccinium macrocarpon HOM05D004885 ORTHO05D006124 2.8e-10 68.2 66 50.0
TWI53G2056 Tripterygium wilfordii HOM05D004885 ORTHO05D006124 4.7e-10 67.4 67 50.7
CANSAT80G0225 Cannabis sativa HOM05D004885 ORTHO05D006124 6.1e-10 67.0 63 50.8
Hma1.2p1_0300F.1_g118050 Hydrangea macrophylla HOM05D004885 ORTHO05D006124 6.1e-10 67.0 63 50.8
TAR629G2658 Trochodendron aralioides HOM05D004885 ORTHO05D006124 6.1e-10 67.0 64 45.3
Rhsim08G0027300 Rhododendron simsii HOM05D004885 ORTHO05D006124 1.8e-09 65.5 62 51.6
CSS0037388 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 2.3e-09 65.1 63 49.2
CiPaw.06G030500 Carya illinoinensis HOM05D004885 ORTHO05D006124 2.3e-09 65.1 66 45.5
Atru.chr3.136 Acer truncatum HOM05D004885 ORTHO05D006124 3.1e-09 64.7 66 48.5
GSVIVG01026648001 Vitis vinifera HOM05D004885 ORTHO05D006124 3.1e-09 64.7 63 49.2
Cc07_g11780 Coffea canephora HOM05D004885 ORTHO05D006124 8.9e-09 63.2 65 46.2
MD17G1057100 Malus domestica HOM05D004885 ORTHO05D006124 8.9e-09 63.2 63 52.4
Ciclev10025327m.g Citrus clementina HOM05D004885 ORTHO05D006124 1.2e-08 62.8 66 43.9
RcHm_v2.0_Chr2g0097311 Rosa chinensis HOM05D004885 ORTHO05D006124 1.2e-08 62.8 63 52.4
Hma1.2p1_0085F.1_g044730 Hydrangea macrophylla HOM05D004885 ORTHO05D006124 1.5e-08 62.4 66 45.5
Manes.01G155100 Manihot esculenta HOM05D004885 ORTHO05D006124 1.5e-08 62.4 68 50.0
MD02G1117700 Malus domestica HOM05D004885 ORTHO05D006124 2.0e-08 62.0 63 49.2
QL04p012404 Quercus lobata HOM05D004885 ORTHO05D006124 4.4e-08 60.8 63 41.3
Potri.005G028900 Populus trichocarpa HOM05D004885 ORTHO05D006124 5.8e-08 60.5 65 47.7
QL04p013021 Quercus lobata HOM05D004885 ORTHO05D006124 5.8e-08 60.5 63 41.3
EL10Ac8g19196 Beta vulgaris HOM05D004885 ORTHO05D006124 7.5e-08 60.1 71 40.8
VMungo1215G0823 Vigna mungo HOM05D004885 ORTHO05D006124 7.5e-08 60.1 62 45.2
MD15G1232400 Malus domestica HOM05D004885 ORTHO05D006124 1.3e-07 59.3 63 49.2
Cpa.g.sc365.1 Carica papaya HOM05D004885 ORTHO05D006124 1.7e-07 58.9 66 42.4
FvH4_1g10450 Fragaria vesca HOM05D004885 ORTHO05D006124 1.7e-07 58.9 63 49.2
Sabra05G0033700 Salix brachista HOM05D004885 ORTHO05D006124 2.2e-07 58.5 65 46.2
Eucgr.I02226 Eucalyptus grandis HOM05D004885 ORTHO05D006124 2.9e-07 58.2 65 47.7
FAN28G2162 Fragaria x ananassa HOM05D004885 ORTHO05D006124 2.9e-07 58.2 63 47.6
MBI15_g00077_MAGBIO Magnolia biondii HOM05D004885 ORTHO05D006124 2.9e-07 58.2 64 46.9
HPP92_017799 Vanilla planifolia HOM05D004885 ORTHO05D006124 2.9e-07 58.2 65 41.5
FAN26G3465 Fragaria x ananassa HOM05D004885 ORTHO05D006124 4.9e-07 57.4 63 47.6
HanXRQChr14g0442521 Helianthus annuus HOM05D004885 ORTHO05D006124 4.9e-07 57.4 63 44.4
Prupe.7G181700 Prunus persica HOM05D004885 ORTHO05D006124 4.9e-07 57.4 63 50.8
Haze_00453 Corylus avellana HOM05D004885 ORTHO05D006124 6.4e-07 57.0 63 42.9
Nn4g22671 Nelumbo nucifera HOM05D004885 ORTHO05D006124 6.4e-07 57.0 66 40.9
ATR0605G212 Amborella trichopoda HOM05D004885 ORTHO05D006124 1.1e-06 56.2 69 46.4
AT3G06540 Arabidopsis thaliana HOM05D004885 ORTHO05D006124 1.4e-06 55.8 63 47.6
Lj4C235G2 Lonicera japonica HOM05D004885 ORTHO05D006124 1.9e-06 55.5 75 40.0
MD10G1065000 Malus domestica HOM05D004885 ORTHO05D006124 1.9e-06 55.5 63 47.6
Potri.005G030000 Populus trichocarpa HOM05D004885 ORTHO05D006124 1.9e-06 55.5 65 44.6
C05p60690 Brassica napus HOM05D001895 ORTHO05D002082 2.4e-06 55.1 63 44.4
BolC5t34729H Brassica oleracea HOM05D004885 ORTHO05D006124 2.4e-06 55.1 63 44.4
ECA238G4274 Erigeron canadensis HOM05D004885 ORTHO05D006124 2.4e-06 55.1 63 42.9
Glyma.01G159000 Glycine max HOM05D004885 ORTHO05D006124 2.4e-06 55.1 62 40.3
arahy.Tifrunner.gnm1.ann1.E2QT4D Arachis hypogaea HOM05D004885 ORTHO05D006124 3.2e-06 54.7 62 37.1
arahy.Tifrunner.gnm1.ann1.P2H8QY Arachis hypogaea HOM05D004885 ORTHO05D006124 3.2e-06 54.7 62 37.1
AUR62033951 Chenopodium quinoa HOM05D004885 ORTHO05D006124 3.2e-06 54.7 71 38.0
Glyma.11G085700 Glycine max HOM05D004885 ORTHO05D006124 7.0e-06 53.5 62 38.7
Psat2g149880 Pisum sativum HOM05D004885 ORTHO05D006124 7.0e-06 53.5 62 38.7
Medtr5g024150 Medicago truncatula HOM05D004885 ORTHO05D006124 9.2e-06 53.1 62 40.3


User provided reference genes

Program Settings