Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 8.1e-273 943.7 723 100.0
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.2e-241 839.3 509 90.8
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 7.0e-200 701.4 524 68.1
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 4.8e-164 582.4 517 70.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 5.3e-163 578.9 520 66.2
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 1.2e-159 567.8 517 64.2
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 2.4e-155 553.5 511 66.1
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 3.1e-155 553.1 519 65.5
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.1e-155 553.1 478 71.8
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.5e-153 545.4 478 69.0
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.4e-152 544.3 478 70.7
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 5.0e-145 519.2 524 62.4
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.2e-143 514.6 449 58.1
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 4.3e-141 506.1 518 60.8
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 3.4e-138 496.5 527 61.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 7.7e-138 495.4 526 59.1
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 9.4e-136 488.4 509 61.7
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.2e-135 488.0 532 61.3
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.6e-135 487.6 532 61.3
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 2.7e-135 486.9 528 59.8
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 8.8e-134 481.9 505 62.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 2.0e-133 480.7 453 65.3
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 9.1e-131 471.9 528 58.9
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 3.4e-130 469.9 501 61.3
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 5.9e-130 469.2 528 58.7
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.0e-129 468.4 453 64.2
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 2.2e-129 467.2 524 57.4
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 8.5e-129 465.3 531 57.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.9e-128 464.2 543 56.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 3.2e-128 463.4 460 63.9
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 5.5e-128 462.6 526 57.8
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 6.1e-127 459.1 428 66.6
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 8.0e-127 458.8 512 57.2
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.0e-126 458.4 521 58.0
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.4e-126 458.0 518 56.8
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-126 457.2 521 57.4
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 3.0e-126 456.8 525 57.3
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.9e-126 456.4 356 73.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 5.2e-126 456.1 432 66.0
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 5.2e-126 456.1 513 58.3
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 3.3e-125 453.4 517 56.3
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 3.3e-125 453.4 485 61.0
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 1.3e-124 451.4 515 56.3
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.7e-124 451.1 512 56.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 4.8e-124 449.5 512 56.2
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.8e-123 447.6 430 63.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 3.1e-123 446.8 444 62.6
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.1e-123 446.8 518 54.8
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 4.1e-123 446.4 512 51.4
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.1e-123 446.4 522 55.6
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 7.0e-123 445.7 487 57.5
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 7.0e-123 445.7 496 55.6
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.2e-122 444.9 451 61.0
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.2e-122 444.9 540 57.4
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 4.5e-122 443.0 451 62.1
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.3e-121 441.4 434 63.8
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.7e-121 441.0 437 55.8
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.7e-121 441.0 451 60.8
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.7e-121 441.0 436 62.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.7e-121 441.0 466 59.4
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 3.8e-121 439.9 529 55.6
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 5.0e-121 439.5 535 54.0
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 6.5e-121 439.1 515 55.5
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 4.2e-120 436.4 553 53.3
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 7.2e-120 435.6 438 62.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.1e-119 434.1 440 61.1
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.0e-118 429.9 507 56.6
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.0e-118 429.9 507 56.6
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 4.0e-118 429.9 541 55.1
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.2e-118 429.5 444 50.7
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 4.4e-117 426.4 497 55.9
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 6.3e-116 422.5 552 51.4
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.4e-115 421.4 524 47.1
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 4.1e-115 419.9 534 52.8
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.2e-114 418.3 435 59.8
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 2.7e-114 417.2 323 77.4
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 5.9e-114 416.0 357 69.7
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.2e-113 414.1 517 53.8
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.1e-112 411.8 521 53.4
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.2e-112 409.8 439 50.6
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 5.5e-112 409.5 347 69.5
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.7e-111 407.1 456 59.9
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 8.0e-111 405.6 457 58.4
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 4.0e-110 403.3 457 59.3
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 8.8e-110 402.1 433 61.2
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.4e-107 394.0 359 66.0
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.4e-107 394.0 359 66.0
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.5e-106 390.2 359 66.0
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.7e-105 387.9 360 65.8
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.9e-105 387.1 324 72.8
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.9e-105 387.1 315 72.4
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.1e-104 385.2 359 65.5
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 7.2e-104 382.5 440 56.6
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.6e-103 380.2 443 55.5
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 6.8e-102 375.9 300 75.0
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.5e-101 374.8 315 70.5
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 4.4e-101 373.2 342 64.3
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 1.4e-99 368.2 352 62.5
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 9.2e-99 365.5 442 56.3
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.3e-94 350.9 429 56.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 6.6e-89 332.8 359 59.9
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.3e-73 282.0 370 44.1
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 6.2e-63 246.5 284 47.2
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 3.1e-62 244.2 187 63.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 9.9e-61 239.2 511 32.9
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-57 228.0 201 56.7
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.9e-40 171.8 363 43.0
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.2e-37 162.5 350 36.0
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.6e-31 142.1 348 41.1
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.9e-27 128.6 218 53.2
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.8e-20 104.4 133 39.1
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.1e-14 84.3 46 80.4
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 1.0e-12 79.7 127 36.2


User provided reference genes

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