Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1156500 Malus domestica HOM05D001092 ORTHO05D017212 2.4e-78 295.4 152 100.0
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 7.0e-41 171.0 144 64.6
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 2.1e-37 159.5 144 61.1
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 8.0e-37 157.5 148 56.8
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 5.2e-36 154.8 144 58.3
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 1.5e-35 153.3 144 57.6
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.5e-35 153.3 144 57.6
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.3e-35 152.1 144 56.9
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 5.7e-35 151.4 144 58.3
QL06p013529 Quercus lobata HOM05D001092 ORTHO05D000923 1.3e-34 150.2 144 56.2
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 6.3e-34 147.9 144 55.6
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 2.0e-32 142.9 144 54.9
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 4.5e-32 141.7 144 52.1
Cpa.g.sc146.59 Carica papaya HOM05D001092 ORTHO05D000923 1.3e-31 140.2 148 49.3
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 1.7e-31 139.8 180 45.6
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 8.5e-31 137.5 145 51.7
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.1e-30 137.1 144 52.1
MELO3C006741.2 Cucumis melo HOM05D001092 ORTHO05D000923 4.2e-30 135.2 144 52.1
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 5.5e-30 134.8 144 50.7
ClCG05G006770 Citrullus lanatus HOM05D001092 ORTHO05D000923 7.2e-30 134.4 162 48.1
Actinidia18491 Actinidia chinensis HOM05D001092 ORTHO05D000923 9.4e-30 134.0 144 50.7
Dinv29544 Davidia involucrata HOM05D001092 ORTHO05D000923 9.4e-30 134.0 144 51.4
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 2.1e-29 132.9 168 46.4
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 2.7e-29 132.5 144 49.3
Psat0s45g0120 Pisum sativum HOM05D001092 ORTHO05D000923 2.7e-29 132.5 144 48.6
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 2.7e-29 132.5 144 48.6
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 4.7e-29 131.7 144 49.3
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 4.7e-29 131.7 144 50.7
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 6.1e-29 131.3 144 50.0
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 6.1e-29 131.3 144 48.6
Gohir.A10G175901 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.4e-28 130.2 144 50.0
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.4e-28 130.2 144 50.0
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.4e-28 130.2 144 50.0
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 1.4e-28 130.2 191 43.5
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 1.8e-28 129.8 144 48.6
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 2.3e-28 129.4 144 48.6
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 5.2e-28 128.3 144 47.9
vmacro07984 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 6.8e-28 127.9 144 50.0
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 8.8e-28 127.5 144 49.3
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 8.8e-28 127.5 144 50.0
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 1.5e-27 126.7 148 46.6
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 2.0e-27 126.3 144 44.4
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 2.6e-27 125.9 143 45.5
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 3.4e-27 125.6 144 46.5
Lj6C698G8 Lonicera japonica HOM05D001092 ORTHO05D000923 4.4e-27 125.2 167 43.1
Peaxi162Scf00290g00313 Petunia axillaris HOM05D001092 ORTHO05D000923 4.4e-27 125.2 144 47.9
PSO210G3521 Papaver somniferum HOM05D001092 ORTHO05D000923 7.5e-27 124.4 144 46.5
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 1.3e-26 123.6 144 47.2
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 1.3e-26 123.6 143 47.6
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 1.3e-26 123.6 144 47.9
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 2.8e-26 122.5 144 45.8
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 3.7e-26 122.1 181 42.0
AUR62003914 Chenopodium quinoa HOM05D001092 ORTHO05D000923 8.3e-26 120.9 144 45.1
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 8.3e-26 120.9 144 45.8
Sopen09g004100 Solanum pennellii HOM05D001092 ORTHO05D000923 1.1e-25 120.6 144 45.1
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 1.8e-25 119.8 144 45.8
unitig_82.g26961 Utricularia gibba HOM05D001092 ORTHO05D000923 1.8e-25 119.8 96 57.3
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 2.4e-25 119.4 145 43.4
arahy.Tifrunner.gnm1.ann1.NU1CTT Arachis hypogaea HOM05D001092 ORTHO05D000923 3.1e-25 119.0 145 45.5
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.1e-25 119.0 144 45.8
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 4.1e-25 118.6 144 44.4
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 4.1e-25 118.6 144 44.4
Solyc09g009370.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 4.1e-25 118.6 143 44.8
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 5.4e-25 118.2 144 44.4
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 5.4e-25 118.2 144 44.4
CAN.G824.5 Capsicum annuum HOM05D001092 ORTHO05D000923 5.4e-25 118.2 145 45.5
AUR62038227 Chenopodium quinoa HOM05D001092 ORTHO05D000923 5.4e-25 118.2 144 44.4
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 5.4e-25 118.2 191 39.8
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 9.1e-25 117.5 145 42.8
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 9.1e-25 117.5 145 42.8
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 9.1e-25 117.5 145 42.8
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 9.1e-25 117.5 145 42.8
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 9.1e-25 117.5 144 45.1
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 1.2e-24 117.1 144 43.8
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 1.2e-24 117.1 144 43.1
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 1.2e-24 117.1 144 43.8
ATR1145G101 Amborella trichopoda HOM05D001092 ORTHO05D000923 2.7e-24 115.9 144 43.1
EL10Ac6g15714 Beta vulgaris HOM05D001092 ORTHO05D000923 2.7e-24 115.9 144 43.1
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 3.5e-24 115.5 145 42.1
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 7.7e-24 114.4 144 43.1
DCAR_023379 Daucus carota HOM05D001092 ORTHO05D000923 7.7e-24 114.4 144 45.1
HPP92_008101 Vanilla planifolia HOM05D001092 ORTHO05D000923 7.7e-24 114.4 144 42.4
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 1.0e-23 114.0 144 42.4
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 1.0e-23 114.0 144 43.1
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 1.0e-23 114.0 144 43.1
SHI00081 Sapria himalayana HOM05D001092 ORTHO05D000923 1.7e-23 113.2 142 42.3
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 2.9e-23 112.5 144 42.4
DCAR_026963 Daucus carota HOM05D001092 ORTHO05D000923 2.5e-22 109.4 144 43.1
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 9.5e-22 107.5 144 41.7
HanXRQChr10g0319871 Helianthus annuus HOM05D001092 ORTHO05D000923 1.4e-20 103.6 148 38.5
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 2.3e-20 102.8 180 35.6
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 3.0e-20 102.4 148 40.5
CDE02G1757 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 2.0e-19 99.8 144 38.2
Haze_00819 Corylus avellana HOM05D001092 ORTHO05D000923 4.9e-18 95.1 53 83.0
COL.COLO4_34529 Corchorus olitorius HOM05D001092 ORTHO05D000923 3.1e-17 92.4 61 72.1
unitig_578.g15846 Utricularia gibba HOM05D001092 ORTHO05D000923 7.0e-17 91.3 181 30.9
unitig_8.g4076 Utricularia gibba HOM05D001092 ORTHO05D000923 2.0e-16 89.7 181 30.4
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 2.7e-16 89.4 144 39.6
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 3.6e-13 79.0 145 34.5
Haze_00818 Corylus avellana HOM05D001092 ORTHO05D000923 8.0e-13 77.8 59 64.4
SEGI_19754 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 3.0e-12 75.9 128 35.9
Lsat_1_v5_gn_1_75900 Lactuca sativa HOM05D000200 ORTHO05D017212 4.4e-11 72.0 63 54.0
Mapoly0076s0036 Marchantia polymorpha HOM05D001092 ORTHO05D000923 1.3e-10 70.5 118 34.7
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 3.7e-10 68.9 118 36.4
Haze_00861 Corylus avellana HOM05D001092 ORTHO05D000923 4.9e-10 68.6 59 59.3
Atru.chr4.3074 Acer truncatum HOM05D001092 ORTHO05D000923 1.8e-09 66.6 44 63.6
Aqoxy4G01582 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.8e-09 66.6 47 61.7
Aqoxy2G01196 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 2.4e-09 66.2 45 62.2
CSS0029324 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 4.1e-09 65.5 40 70.0
Lsat_1_v5_gn_2_136040 Lactuca sativa HOM05D000200 ORTHO05D017212 4.1e-09 65.5 62 50.0
unitig_17.g29362 Utricularia gibba HOM05D001092 ORTHO05D000923 2.0e-08 63.2 47 57.4
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 2.7e-08 62.8 40 65.0
TAR362G0616 Trochodendron aralioides HOM05D001092 ORTHO05D000923 7.8e-08 61.2 36 69.4
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 1.3e-07 60.5 131 30.5
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 3.0e-07 59.3 131 29.8


User provided reference genes

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