Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 0.0e+00 1163.7 600 100.0
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 2.5e-259 898.7 614 79.2
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 7.3e-251 870.5 605 78.3
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.3e-247 859.8 609 76.7
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.7e-247 859.4 606 76.7
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 6.4e-247 857.4 617 76.0
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 5.4e-246 854.4 606 76.1
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 7.0e-246 854.0 622 75.4
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 1.2e-221 773.5 636 67.1
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 3.5e-221 771.9 652 66.4
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 2.4e-217 759.2 651 65.1
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 4.0e-217 758.4 651 65.9
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 1.0e-212 743.8 620 65.6
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 3.3e-211 738.8 619 64.1
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 4.3e-211 738.4 638 63.3
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 7.4e-211 737.6 638 64.7
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 7.4e-211 737.6 621 64.9
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 2.8e-210 735.7 692 60.3
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.8e-210 735.7 641 64.6
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.0e-209 731.9 618 65.9
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 2.6e-208 729.2 620 64.7
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 3.4e-208 728.8 625 64.3
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.3e-207 726.9 626 64.7
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.7e-207 726.5 485 76.3
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 4.2e-206 721.8 650 62.5
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 2.3e-204 716.1 641 61.0
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 5.1e-204 714.9 616 63.3
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 5.1e-204 714.9 481 75.1
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 6.7e-204 714.5 622 63.7
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.9e-203 713.0 644 62.3
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 5.6e-203 711.4 616 63.0
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 7.4e-203 711.1 625 65.4
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 1.3e-202 710.3 649 61.6
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 6.2e-202 708.0 616 63.8
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-201 707.2 549 69.0
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 3.1e-201 705.7 653 61.4
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 1.2e-200 703.7 618 64.9
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 4.9e-199 698.4 617 63.4
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 6.0e-197 691.4 439 80.2
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.0e-197 691.4 647 62.1
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 2.3e-196 689.5 629 62.6
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 8.7e-196 687.6 622 63.2
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-195 687.2 651 59.8
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-195 686.0 651 61.8
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 3.3e-195 685.6 586 65.4
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-194 682.6 655 60.2
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 4.8e-194 681.8 653 60.0
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-193 679.9 618 63.1
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 6.9e-193 677.9 625 62.2
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 6.9e-193 677.9 586 65.0
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 1.2e-192 677.2 628 61.3
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 3.4e-192 675.6 641 61.8
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 7.7e-192 674.5 532 66.9
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 1.1e-187 660.6 640 58.9
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 9.7e-187 657.5 629 62.2
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 3.7e-186 655.6 405 84.9
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 6.3e-186 654.8 615 61.3
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.4e-185 653.7 554 67.5
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 1.1e-182 644.0 618 60.4
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.1e-182 644.0 620 58.4
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 9.4e-182 641.0 402 77.6
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 1.1e-179 634.0 393 79.9
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 1.1e-177 627.5 637 55.6
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 9.1e-177 624.4 631 56.9
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.5e-176 623.6 628 57.0
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 4.5e-176 622.1 636 56.1
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 4.5e-176 622.1 652 55.5
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 4.5e-176 622.1 639 56.7
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 4.2e-174 615.5 611 57.8
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 5.5e-174 615.1 574 61.7
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 6.1e-173 611.7 621 54.9
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.4e-172 610.5 641 56.0
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.9e-172 609.0 555 60.9
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 2.0e-171 606.7 652 54.0
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 7.4e-171 604.7 552 62.1
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 6.3e-170 601.7 432 71.5
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 3.1e-169 599.4 634 54.9
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 1.6e-165 587.0 414 70.8
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 2.1e-165 586.6 669 52.8
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 4.0e-164 582.4 611 57.4
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 8.8e-164 581.3 601 56.6
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.2e-163 580.9 410 70.0
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 3.1e-161 572.8 412 71.1
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-157 560.5 617 54.8
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 6.1e-157 558.5 620 53.2
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 2.2e-154 550.1 397 70.5
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 9.1e-153 544.7 608 55.3
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 1.0e-151 541.2 623 50.6
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 6.1e-149 531.9 364 73.6
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 4.9e-146 522.3 595 53.8
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 7.8e-144 515.0 610 51.0
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 3.3e-142 509.6 611 51.7
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 6.1e-141 505.4 442 62.4
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 4.0e-140 502.7 564 53.9
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.1e-137 494.6 486 57.6
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 3.0e-135 486.5 521 54.3
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 3.2e-129 466.5 400 62.2
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 7.0e-129 465.3 450 59.1
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 3.3e-126 456.4 436 54.4
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 2.2e-122 443.7 746 42.4
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 8.6e-119 431.8 340 63.8
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 1.9e-118 430.6 507 47.7
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 1.8e-116 424.1 285 74.0
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 5.2e-116 422.5 561 47.2
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 7.1e-113 412.1 571 46.9
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 9.0e-108 395.2 539 49.7
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.3e-105 385.2 521 48.9
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 2.3e-103 380.6 309 66.3
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.3e-90 338.2 413 51.6
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 2.5e-89 334.0 339 52.5
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 2.3e-87 327.4 192 83.9
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 5.7e-86 322.8 618 39.8
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 4.8e-85 319.7 392 51.5
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 8.2e-85 318.9 477 40.7
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 1.8e-84 317.8 423 49.2
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 1.0e-79 302.0 418 49.0
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 8.2e-77 292.4 171 83.0
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 4.5e-75 286.6 413 45.0
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 3.6e-72 276.9 161 83.2
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.4e-71 275.0 549 39.0
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 1.8e-68 264.6 333 45.3
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 4.5e-67 260.0 160 78.1
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 5.9e-67 259.6 188 73.9
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 7.7e-67 259.2 332 49.4
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 9.4e-65 252.3 161 73.9
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.6e-62 244.2 124 96.0
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 4.7e-56 223.4 180 60.6
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.8e-53 214.2 309 48.5
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.0e-51 208.0 126 79.4
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 8.0e-48 196.1 180 61.7
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 2.0e-43 181.4 162 64.2
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.0e-43 181.4 142 66.9
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.2e-41 174.1 126 69.0
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.2e-41 172.9 111 78.4
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.2e-40 172.2 116 75.9
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 3.6e-40 170.6 415 30.1
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 1.4e-39 168.7 382 31.7
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 5.9e-35 153.3 136 60.3
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 3.8e-34 150.6 239 40.2
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 3.8e-34 150.6 239 40.2
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 9.5e-33 146.0 299 38.5
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-32 144.4 87 81.6
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 2.9e-26 124.4 324 27.2
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 5.0e-26 123.6 131 54.2
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 2.8e-24 117.9 69 78.3
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-23 115.5 84 66.7
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-23 115.5 84 66.7
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-23 115.5 84 66.7
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-23 115.5 84 66.7
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 4.0e-23 114.0 70 82.9
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 6.8e-23 113.2 76 72.4
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 6.8e-23 113.2 92 64.1
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.5e-22 109.8 76 69.7
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 4.9e-21 107.1 69 71.0
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.1e-20 105.9 275 34.2
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.4e-20 105.5 82 69.5
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.1e-16 91.7 54 79.6
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 2.8e-16 91.3 160 40.0
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 4.4e-14 84.0 133 39.8
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.9e-13 81.3 93 48.4
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 4.9e-13 80.5 79 57.0
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-12 79.3 45 88.9
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 6.0e-11 73.6 70 54.3
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-10 72.4 240 36.2
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 1.7e-10 72.0 48 75.0
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 1.7e-10 72.0 214 34.1
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 5.1e-10 70.5 81 45.7
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 8.6e-10 69.7 40 85.0
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 2.5e-09 68.2 47 72.3
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 2.8e-08 64.7 36 77.8
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 2.8e-08 64.7 36 83.3
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 2.8e-08 64.7 46 58.7
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 2.8e-08 64.7 46 58.7
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 2.8e-08 64.7 46 58.7
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 9.9e-06 56.2 51 58.8


User provided reference genes

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