Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1010400 Malus domestica HOM05D001715 ORTHO05D003849 3.2e-46 188.0 88 100.0
MD13G1013500 Malus domestica HOM05D001715 ORTHO05D003849 6.0e-45 183.7 88 97.7
CARHR141560 Cardamine hirsuta HOM05D001715 ORTHO05D003849 5.1e-44 180.6 88 96.6
Sp2g16660 Schrenkiella parvula HOM05D001715 ORTHO05D003849 5.1e-44 180.6 88 96.6
VMungo1215G1757 Vigna mungo HOM05D001715 ORTHO05D003849 5.1e-44 180.6 88 96.6
Prupe.1G340200 Prunus persica HOM05D001715 ORTHO05D003849 6.6e-44 180.3 88 95.5
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.1e-43 179.5 88 95.5
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 1.1e-43 179.5 88 95.5
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.1e-43 179.5 88 95.5
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 1.1e-43 179.5 88 95.5
Psat1g055120 Pisum sativum HOM05D001715 ORTHO05D003849 1.1e-43 179.5 88 95.5
BcaB07g30156 Brassica carinata HOM05D001715 ORTHO05D003849 1.5e-43 179.1 88 94.3
AL4G45560 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
CiPaw.05G161400 Carya illinoinensis HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
MELO3C009841.2 Cucumis melo HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
CsaV3_3G041110 Cucumis sativus L. HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Duzib150G0287 Durio zibethinus HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Duzib168G2366 Durio zibethinus HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Thhalv10004580m.g Eutrema salsugineum HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Glyma.01G029600 Glycine max HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Gohir.A08G197000 Gossypium hirsutum HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Gorai.004G228300 Gossypium raimondii HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Lj1g0009588 Lotus japonicus HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Manes.15G140500 Manihot esculenta HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Phvul.002G070400 Phaseolus vulgaris HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Potri.008G141400 Populus trichocarpa HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Sabra08G0107300 Salix brachista HOM05D001715 ORTHO05D003849 1.9e-43 178.7 88 95.5
Lalb_Chr07g0188201 Lupinus albus HOM05D001715 ORTHO05D003849 2.5e-43 178.3 88 94.3
Potri.010G100101 Populus trichocarpa HOM05D001715 ORTHO05D003849 2.5e-43 178.3 88 94.3
QL03p040982 Quercus lobata HOM05D001715 ORTHO05D003849 2.5e-43 178.3 87 95.4
GSVIVG01011562001 Vitis vinifera HOM05D001715 ORTHO05D003849 3.3e-43 177.9 88 94.3
AT2G46280 Arabidopsis thaliana HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
Psat6g005120 Pisum sativum HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
Sed0005188 Sechium edule HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
Sed0027787 Sechium edule HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
Thecc.09G339300 Theobroma cacao HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
vmacro00944 Vaccinium macrocarpon HOM05D001715 ORTHO05D003849 4.3e-43 177.6 88 94.3
Carub.0004s2899 Capsella rubella HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 93.2
ClCG10G015390 Citrullus lanatus HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Ciclev10015917m.g Citrus clementina HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Cc10_g14000 Coffea canephora HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 93.2
Gohir.A05G102200 Gossypium hirsutum HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Gohir.D05G101900 Gossypium hirsutum HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Gohir.D08G214200 Gossypium hirsutum HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Gorai.009G106100 Gossypium raimondii HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
Medtr2g087640 Medicago truncatula HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
PGR042G0006 Punica granatum HOM05D001715 ORTHO05D003849 5.6e-43 177.2 88 94.3
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 7.3e-43 176.8 88 93.2
BraA06t27039Z Brassica rapa HOM05D001715 ORTHO05D003849 7.3e-43 176.8 88 93.2
CSS0047432 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 7.3e-43 176.8 88 94.3
Dinv37405 Davidia involucrata HOM05D001715 ORTHO05D003849 7.3e-43 176.8 88 94.3
Lalb_Chr12g0209191 Lupinus albus HOM05D001715 ORTHO05D003849 7.3e-43 176.8 88 94.3
Atru.chr11.1039 Acer truncatum HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
arahy.Tifrunner.gnm1.ann1.WSL47M Arachis hypogaea HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
CANSAT78G1863 Cannabis sativa HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
Glyma.09G234100 Glycine max HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
Glyma.12G002900 Glycine max HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
Sp4g28330 Schrenkiella parvula HOM05D001715 ORTHO05D003849 9.6e-43 176.4 88 93.2
Ca_08066_v3 Cicer arietinum L. HOM05D001715 ORTHO05D003849 1.3e-42 176.0 88 93.2
Hund08580 Selenicereus undatus HOM05D001715 ORTHO05D003849 1.3e-42 176.0 88 93.2
Sc06g0006940 Simmondsia chinensis HOM05D001715 ORTHO05D003849 1.3e-42 176.0 88 93.2
BcaC06g30989 Brassica carinata HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 92.0
Migut.C01323 Erythranthe guttata HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
Migut.C01390 Erythranthe guttata HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
Nitab4.5_0000159g0120 Nicotiana tabacum HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
Nitab4.5_0000531g0060 Nicotiana tabacum HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
Peaxi162Scf00495g00212 Petunia axillaris HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
SalBow2G1213 Salvia bowleyana HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
SalBow7G1220 Salvia bowleyana HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
TPR.G39026 Trifolium pratense HOM05D001715 ORTHO05D003849 1.6e-42 175.6 88 93.2
Actinidia29380 Actinidia chinensis HOM05D001715 ORTHO05D003849 2.1e-42 175.3 88 93.2
Ah.07g201370 Amaranthus hybridus HOM05D001715 ORTHO05D003849 2.1e-42 175.3 88 93.2
Cc10_g15990 Coffea canephora HOM05D001715 ORTHO05D003849 2.1e-42 175.3 88 92.0
BcaC06g33818 Brassica carinata HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 92.0
BolC7t44169H Brassica oleracea HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 92.0
CSS0028339 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 92.0
Eucgr.F02830 Eucalyptus grandis HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 93.2
PGR042G0252 Punica granatum HOM05D001715 ORTHO05D003849 2.8e-42 174.9 86 94.2
PGSC0003DMG400009231 Solanum tuberosum HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 93.2
TWI74G1126 Tripterygium wilfordii HOM05D001715 ORTHO05D003849 2.8e-42 174.9 88 93.2
CSS0000267 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 3.6e-42 174.5 88 93.2
Cpa.g.sc2.77 Carica papaya HOM05D001715 ORTHO05D003849 3.6e-42 174.5 88 92.0
Manes.17G091600 Manihot esculenta HOM05D001715 ORTHO05D003849 3.6e-42 174.5 88 92.0
THA.LOC104800464 Tarenaya hassleriana HOM05D001715 ORTHO05D003849 3.6e-42 174.5 88 93.2
Ah.16g103720 Amaranthus hybridus HOM05D001715 ORTHO05D003849 4.8e-42 174.1 88 92.0
Cpa.g.sc10.260 Carica papaya HOM05D001715 ORTHO05D003849 4.8e-42 174.1 88 92.0
SGA_v2.0_scaffold443G51684 Striga asiatica HOM05D001715 ORTHO05D003849 4.8e-42 174.1 88 92.0
FvH4_4g35950 Fragaria vesca HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
FAN07G0137 Fragaria x ananassa HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
FAN12G3604 Fragaria x ananassa HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
FAN17G1769 Fragaria x ananassa HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
FAN22G0615 Fragaria x ananassa HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
RcHm_v2.0_Chr4g0445591 Rosa chinensis HOM05D001715 ORTHO05D003849 6.2e-42 173.7 88 92.0
AL355U10020 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 92.0
AL4G45590 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 92.0
MSTRG.1603 Avicennia marina HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 93.2
Peaxi162Scf00207g01049 Petunia axillaris HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 92.0
THA.LOC104826461 Tarenaya hassleriana HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 90.9
TWI53G0712 Tripterygium wilfordii HOM05D001715 ORTHO05D003849 8.1e-42 173.3 88 89.8
AT2G46290 Arabidopsis thaliana HOM05D001715 ORTHO05D003849 1.4e-41 172.6 88 92.0
Solyc11g017070.2 Solanum lycopersicum HOM05D001715 ORTHO05D003849 1.4e-41 172.6 88 90.9
Sopen11g009060 Solanum pennellii HOM05D001715 ORTHO05D003849 1.4e-41 172.6 88 90.9
SGA_v2.0_scaffold118G32631 Striga asiatica HOM05D001715 ORTHO05D003849 2.4e-41 171.8 88 90.9
Ca_04152_v3 Cicer arietinum L. HOM05D001715 ORTHO05D003849 5.3e-41 170.6 88 88.6
HanXRQChr09g0266861 Helianthus annuus HOM05D001715 ORTHO05D003849 6.9e-41 170.2 85 92.9
ECA234G3447 Erigeron canadensis HOM05D001715 ORTHO05D003849 9.0e-41 169.9 87 89.7
HanXRQChr05g0150981 Helianthus annuus HOM05D001715 ORTHO05D003849 9.0e-41 169.9 85 91.8
Lsat_1_v5_gn_6_110981 Lactuca sativa HOM05D001715 ORTHO05D003849 9.0e-41 169.9 85 91.8
EL10As1g23124 Beta vulgaris HOM05D001715 ORTHO05D003849 1.2e-40 169.5 88 88.6
AUR62002458 Chenopodium quinoa HOM05D001715 ORTHO05D003849 2.6e-40 168.3 88 88.6
Hma1.2p1_0188F.1_g082460 Hydrangea macrophylla HOM05D001715 ORTHO05D003849 2.6e-40 168.3 88 88.6
TAR376G0581 Trochodendron aralioides HOM05D001715 ORTHO05D003849 3.4e-40 167.9 88 88.6
PSO339G4281 Papaver somniferum HOM05D001715 ORTHO05D003849 4.5e-40 167.5 88 87.5
PSO384G1200 Papaver somniferum HOM05D001715 ORTHO05D003849 4.5e-40 167.5 88 87.5
Nn5g27381 Nelumbo nucifera HOM05D001715 ORTHO05D003849 5.8e-40 167.2 88 88.6
HPP92_019310 Vanilla planifolia HOM05D001715 ORTHO05D003849 5.8e-40 167.2 88 86.4
MBI06_g32166_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D003849 9.9e-40 166.4 88 87.5
Nn4g22327 Nelumbo nucifera HOM05D001715 ORTHO05D003849 1.3e-39 166.0 87 87.4
Rhsim12G0002400 Rhododendron simsii HOM05D001715 ORTHO05D003849 1.7e-39 165.6 103 78.6
TAR628G1324 Trochodendron aralioides HOM05D001715 ORTHO05D003849 1.7e-39 165.6 88 87.5
Os05g0256000 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 2.2e-39 165.2 88 87.5
Os08g0308100 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 2.2e-39 165.2 88 87.5
HPP92_011166 Vanilla planifolia HOM05D001715 ORTHO05D003849 4.9e-39 164.1 88 84.1
Hund08577 Selenicereus undatus HOM05D001715 ORTHO05D003849 1.1e-38 162.9 81 93.8
ATR0716G044 Amborella trichopoda HOM05D001715 ORTHO05D003849 1.9e-38 162.2 88 84.1
AagrBONN_evm.TU.Sc2ySwM_228.65 Anthoceros agrestis HOM05D001715 ORTHO05D003849 7.1e-38 160.2 88 79.5
AagrBONN_evm.TU.Sc2ySwM_368.2541 Anthoceros agrestis HOM05D001715 ORTHO05D003849 7.1e-38 160.2 88 78.4
Aqoxy2G01757 Aquilegia oxysepala HOM05D001715 ORTHO05D003849 2.7e-37 158.3 88 81.8
Aqoxy2G04128 Aquilegia oxysepala HOM05D001715 ORTHO05D003849 2.7e-37 158.3 88 81.8
Haze_02911 Corylus avellana HOM05D001715 ORTHO05D003849 3.5e-37 157.9 117 70.1
Zm00001eb117170 Zea mays HOM05D001715 ORTHO05D003849 3.5e-37 157.9 88 85.2
Zm00001eb300780 Zea mays HOM05D001715 ORTHO05D003849 3.5e-37 157.9 88 85.2
MBI03_g31840_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D003849 7.9e-37 156.8 93 80.6
PSO081G0127 Papaver somniferum HOM05D001715 ORTHO05D003849 1.0e-36 156.4 88 79.5
Sabra10G0072700 Salix brachista HOM05D001715 ORTHO05D003849 1.0e-36 156.4 124 65.3
AUR62023731 Chenopodium quinoa HOM05D001715 ORTHO05D003849 2.3e-36 155.2 81 88.9
PSO832G3721 Papaver somniferum HOM05D001715 ORTHO05D003849 2.3e-36 155.2 84 83.3
PSO170G5376 Papaver somniferum HOM05D001715 ORTHO05D003849 3.0e-36 154.8 88 78.4
Lj7A418T46 Lonicera japonica HOM05D001715 ORTHO05D003849 3.9e-36 154.5 136 61.0
Mapoly0109s0034 Marchantia polymorpha HOM05D001715 ORTHO05D003849 5.1e-36 154.1 88 78.4
CBR_g31442 Chara braunii HOM05D001715 ORTHO05D003849 6.7e-36 153.7 88 78.4
AUR62023724 Chenopodium quinoa HOM05D001715 ORTHO05D003849 6.7e-36 153.7 88 83.0
PSO170G2454 Papaver somniferum HOM05D001715 ORTHO05D003849 8.7e-36 153.3 88 77.3
RcHm_v2.0_Chr5g0012021 Rosa chinensis HOM05D001715 ORTHO05D003849 1.5e-35 152.5 88 77.3
PSO170G2486 Papaver somniferum HOM05D001715 ORTHO05D003849 3.3e-35 151.4 88 76.1
Pp3c14_22340 Physcomitrium patens HOM05D001715 ORTHO05D003849 3.3e-35 151.4 88 77.3
Pp3c1_37340 Physcomitrium patens HOM05D001715 ORTHO05D003849 4.3e-35 151.0 88 77.3
Pp3c17_19090 Physcomitrium patens HOM05D001715 ORTHO05D003849 7.4e-35 150.2 88 77.3
Haze_23525 Corylus avellana HOM05D001715 ORTHO05D003849 1.6e-34 149.1 145 56.6
SMO329G0061 Selaginella moellendorffii HOM05D001715 ORTHO05D003849 3.7e-34 147.9 86 75.6
VMungo1127G0991 Vigna mungo HOM05D001715 ORTHO05D003849 4.0e-33 144.4 80 86.2
MCO09G836 Micromonas commoda HOM05D001715 ORTHO05D003849 2.6e-32 141.7 86 68.6
PRCOL_00000448 Prasinoderma coloniale HOM05D001715 ORTHO05D003849 3.8e-31 137.9 83 68.7
ECA246G1236 Erigeron canadensis HOM05D001715 ORTHO05D003849 6.4e-31 137.1 69 92.8
Cre03.g194400 Chlamydomonas reinhardtii HOM05D001715 ORTHO05D003849 4.2e-30 134.4 86 69.8
SEGI_36259 Sequoiadendron giganteum HOM05D001715 ORTHO05D003849 2.3e-28 128.6 72 81.9
COL.COLO4_18345 Corchorus olitorius HOM05D001715 ORTHO05D003849 6.7e-28 127.1 62 95.2
unitig_578.g16115 Utricularia gibba HOM05D002356 ORTHO05D003849 6.7e-28 127.1 65 92.3
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.1e-27 126.3 65 89.2
Aa31LG2G5170 Aethionema arabicum HOM05D001715 ORTHO05D003849 1.5e-27 125.9 63 92.1
arahy.Tifrunner.gnm1.ann1.Y0PXUN Arachis hypogaea HOM05D001715 ORTHO05D003849 1.9e-27 125.6 64 89.1
AagrBONN_evm.TU.Sc2ySwM_362.2638 Anthoceros agrestis HOM05D001715 ORTHO05D003849 1.7e-23 112.5 62 79.0
Oeu028628.1 Olea europaea HOM05D001715 ORTHO05D003849 2.2e-23 112.1 55 94.5
Prupe.3G206800 Prunus persica HOM05D001715 ORTHO05D003849 6.1e-21 104.0 88 62.5
SEGI_21521 Sequoiadendron giganteum HOM05D001715 ORTHO05D003849 7.9e-21 103.6 52 88.5
Haze_23745 Corylus avellana HOM05D001715 ORTHO05D003849 2.3e-20 102.1 56 89.3
SHI03265 Sapria himalayana HOM05D001715 ORTHO05D003849 2.3e-20 102.1 56 76.8
CSS0032952 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 1.3e-18 96.3 65 73.8
ECA232G4326 Erigeron canadensis HOM05D001715 ORTHO05D003849 1.6e-18 95.9 51 88.2
CDE05G2262 Ceratophyllum demersum HOM05D001715 ORTHO05D003849 1.4e-17 92.8 45 91.1
CSS0011302 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 3.1e-17 91.7 48 85.4
CSS0043226 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 2.6e-16 88.6 48 83.3
Os11g0606300 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 1.1e-14 83.2 54 75.9
arahy.Tifrunner.gnm1.ann1.17CVLC Arachis hypogaea HOM05D001715 ORTHO05D003849 6.7e-12 73.9 121 40.5
SHI03264 Sapria himalayana HOM05D001715 ORTHO05D003849 2.2e-10 68.9 37 81.1
SEGI_33445 Sequoiadendron giganteum HOM05D001715 ORTHO05D003849 2.9e-07 58.5 37 70.3
unitig_8.g4902 Utricularia gibba HOM05D001715 ORTHO05D003849 1.1e-06 56.6 30 86.7


User provided reference genes

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