Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 4.2e-89 331.3 157 100.0
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.9e-58 228.8 138 81.9
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.6e-56 223.0 138 79.0
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.6e-53 213.0 131 77.9
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.7e-53 211.8 138 76.1
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.1e-52 210.3 138 76.8
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.1e-52 208.8 140 74.3
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-51 206.8 138 73.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.5e-51 204.9 140 75.7
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.1e-47 191.4 135 69.6
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 8.8e-47 190.7 135 69.6
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 9.7e-46 187.2 135 65.9
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.3e-44 181.4 152 59.2
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 6.9e-44 181.0 138 64.5
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 1.5e-43 179.9 161 57.8
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 2.6e-43 179.1 147 63.3
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 3.4e-43 178.7 138 63.0
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.3e-42 176.8 141 59.6
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.7e-42 176.4 138 61.6
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 2.2e-42 176.0 138 60.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 1.4e-41 173.3 144 54.9
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 2.5e-41 172.6 141 56.7
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 9.4e-41 170.6 135 59.3
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 1.6e-40 169.9 142 57.7
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.1e-40 169.5 141 56.7
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 7.9e-40 167.5 141 61.0
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.4e-39 166.8 138 60.1
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 3.0e-39 165.6 130 60.0
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 3.0e-39 165.6 130 60.0
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 3.0e-39 165.6 137 56.9
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 3.9e-39 165.2 155 53.5
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 5.2e-39 164.9 125 61.6
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 1.1e-38 163.7 135 54.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 2.0e-38 162.9 138 58.7
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.6e-38 162.5 135 59.3
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 4.4e-38 161.8 135 59.3
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 9.7e-38 160.6 132 56.8
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.7e-37 159.8 131 59.5
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 2.8e-37 159.1 127 59.8
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.7e-37 158.7 127 58.3
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.7e-37 158.7 127 59.1
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 6.3e-37 157.9 125 59.2
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.8e-36 156.4 138 57.2
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 7.0e-36 154.5 120 55.8
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 5.9e-35 151.4 154 48.7
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 8.5e-34 147.5 148 48.6
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 8.5e-34 147.5 141 52.5
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 3.2e-33 145.6 134 53.0
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 5.5e-33 144.8 138 52.9
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.2e-32 143.7 114 60.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 2.7e-32 142.5 125 54.4
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 4.7e-32 141.7 119 56.3
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.0e-31 140.6 135 51.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.2e-30 137.1 138 47.8
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 3.3e-30 135.6 148 45.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 3.3e-30 135.6 125 52.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 2.2e-29 132.9 145 44.1
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 8.2e-29 131.0 117 51.3
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.6e-27 126.7 127 48.8
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.7e-26 123.2 122 49.2
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 8.5e-26 120.9 85 68.2
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.7e-24 115.2 132 37.9
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 6.1e-24 114.8 90 58.9
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 3.0e-23 112.5 136 36.0
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 4.8e-21 105.1 90 53.3
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 8.3e-21 104.4 77 61.0
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 3.1e-20 102.4 82 59.8
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 7.0e-20 101.3 124 44.4
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 5.0e-18 95.1 122 33.6
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.5e-17 93.6 136 40.4
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 6.1e-16 88.2 122 32.8
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.8e-15 86.7 137 32.1
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.0e-15 85.9 155 32.3
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 5.4e-12 75.1 63 57.1
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.3e-10 70.5 47 66.0


User provided reference genes

Program Settings