Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1098600 Malus domestica HOM05D005566 ORTHO05D007534 5.2e-96 354.4 179 100.0
MD06G1077900 Malus domestica HOM05D005566 ORTHO05D007534 2.7e-76 288.9 163 90.2
Prupe.5G095700 Prunus persica HOM05D005566 ORTHO05D007534 6.7e-67 257.7 163 82.8
RcHm_v2.0_Chr7g0198431 Rosa chinensis HOM05D005566 ORTHO05D007534 1.1e-64 250.4 160 80.6
FvH4_5g01950 Fragaria vesca HOM05D005566 ORTHO05D007534 5.8e-63 244.6 160 78.1
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 5.8e-63 244.6 160 78.1
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 4.9e-62 241.5 160 77.5
FAN04G1912 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.1e-61 240.4 160 76.2
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.4e-61 240.0 160 76.2
Haze_08893 Corylus avellana HOM05D005566 ORTHO05D007534 4.3e-58 228.4 162 72.8
CiPaw.12G095300 Carya illinoinensis HOM05D005566 ORTHO05D007534 4.8e-57 224.9 162 71.6
QL12p018066 Quercus lobata HOM05D005566 ORTHO05D007534 1.4e-56 223.4 162 68.5
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 2.4e-56 222.6 162 70.4
Cfa012142 Carpinus fangiana HOM05D005566 ORTHO05D007534 2.4e-56 222.6 162 71.6
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 5.3e-56 221.5 162 68.5
Sed0016580 Sechium edule HOM05D005566 ORTHO05D007534 1.5e-55 219.9 161 68.9
CANSAT21G2631 Cannabis sativa HOM05D005566 ORTHO05D007534 3.4e-55 218.8 163 68.7
Ah.12g057290 Amaranthus hybridus HOM05D005566 ORTHO05D007534 4.5e-55 218.4 162 69.8
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 4.5e-55 218.4 164 67.7
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 4.5e-55 218.4 163 66.3
PGR031G0987 Punica granatum HOM05D005566 ORTHO05D007534 1.0e-54 217.2 163 67.5
GSVIVG01019806001 Vitis vinifera HOM05D005566 ORTHO05D007534 1.0e-54 217.2 161 68.3
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 1.3e-54 216.9 161 66.5
Sabra03G0087800 Salix brachista HOM05D005566 ORTHO05D007534 1.3e-54 216.9 162 69.1
TAR629G1018 Trochodendron aralioides HOM05D005566 ORTHO05D007534 1.3e-54 216.9 162 69.8
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 1.7e-54 216.5 161 65.8
Dinv38972 Davidia involucrata HOM05D005566 ORTHO05D007534 2.2e-54 216.1 162 67.9
Glyma.08G012600 Glycine max HOM05D005566 ORTHO05D007534 2.2e-54 216.1 167 66.5
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 2.9e-54 215.7 161 65.8
EL10Ac5g12770 Beta vulgaris HOM05D005566 ORTHO05D007534 3.8e-54 215.3 163 66.3
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 8.4e-54 214.2 162 66.7
Ciclev10024399m.g Citrus clementina HOM05D005566 ORTHO05D007534 8.4e-54 214.2 161 66.5
MELO3C005651.2 Cucumis melo HOM05D005566 ORTHO05D007534 8.4e-54 214.2 160 67.5
Duzib205G0430 Durio zibethinus HOM05D005566 ORTHO05D007534 1.4e-53 213.4 162 66.0
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 1.9e-53 213.0 161 64.6
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 1.9e-53 213.0 162 64.8
Nn6g33532 Nelumbo nucifera HOM05D005566 ORTHO05D007534 1.9e-53 213.0 161 67.7
Lj4g0021136 Lotus japonicus HOM05D005566 ORTHO05D007534 2.5e-53 212.6 162 66.7
SalBow6G1897 Salvia bowleyana HOM05D005566 ORTHO05D007534 2.5e-53 212.6 162 66.0
Oeu049553.1 Olea europaea HOM05D005566 ORTHO05D007534 3.2e-53 212.2 162 67.9
Cc08_g14350 Coffea canephora HOM05D005566 ORTHO05D007534 5.5e-53 211.5 163 66.3
Eucgr.D01874 Eucalyptus grandis HOM05D005566 ORTHO05D007534 5.5e-53 211.5 162 66.7
AL1G24290 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 7.1e-53 211.1 165 66.7
TWI81G0928 Tripterygium wilfordii HOM05D005566 ORTHO05D007534 9.3e-53 210.7 163 62.6
Lalb_Chr09g0333291 Lupinus albus HOM05D005566 ORTHO05D007534 1.2e-52 210.3 161 65.2
Thecc.03G275300 Theobroma cacao HOM05D005566 ORTHO05D007534 1.2e-52 210.3 162 65.4
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 2.1e-52 209.5 162 64.8
HanXRQChr02g0048911 Helianthus annuus HOM05D005566 ORTHO05D007534 2.1e-52 209.5 158 63.9
Aqoxy5G04022 Aquilegia oxysepala HOM05D005566 ORTHO05D007534 2.7e-52 209.1 159 66.0
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 2.7e-52 209.1 163 65.6
CSS0044378 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 2.7e-52 209.1 161 67.7
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 2.7e-52 209.1 162 66.0
Nitab4.5_0004032g0020 Nicotiana tabacum HOM05D005566 ORTHO05D007534 2.7e-52 209.1 163 65.0
Peaxi162Scf00102g01550 Petunia axillaris HOM05D005566 ORTHO05D007534 2.7e-52 209.1 162 65.4
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 2.7e-52 209.1 162 67.3
CAN.G792.89 Capsicum annuum HOM05D005566 ORTHO05D007534 3.5e-52 208.8 162 66.0
Lsat_1_v5_gn_6_5820 Lactuca sativa HOM05D005566 ORTHO05D007534 3.5e-52 208.8 158 65.8
SalBow5G3774 Salvia bowleyana HOM05D005566 ORTHO05D007534 3.5e-52 208.8 162 64.2
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 4.6e-52 208.4 163 65.0
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 4.6e-52 208.4 163 65.0
ECA233G6007 Erigeron canadensis HOM05D005566 ORTHO05D007534 4.6e-52 208.4 158 64.6
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 6.1e-52 208.0 162 66.7
MSTRG.11999 Avicennia marina HOM05D005566 ORTHO05D007534 6.1e-52 208.0 162 64.2
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 6.1e-52 208.0 163 64.4
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 6.1e-52 208.0 162 64.8
PSO063G1293 Papaver somniferum HOM05D005566 ORTHO05D007534 6.1e-52 208.0 162 64.8
Psat7g035520 Pisum sativum HOM05D005566 ORTHO05D007534 6.1e-52 208.0 162 64.8
AUR62010607 Chenopodium quinoa HOM05D005566 ORTHO05D007534 7.9e-52 207.6 164 63.4
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 1.0e-51 207.2 163 64.4
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 1.0e-51 207.2 163 64.4
ECA246G0114 Erigeron canadensis HOM05D005566 ORTHO05D007534 1.8e-51 206.5 157 64.3
Sopen08g003840 Solanum pennellii HOM05D005566 ORTHO05D007534 1.8e-51 206.5 162 66.0
Actinidia14546 Actinidia chinensis HOM05D005566 ORTHO05D007534 2.3e-51 206.1 161 66.5
AUR62017248 Chenopodium quinoa HOM05D005566 ORTHO05D007534 2.3e-51 206.1 164 65.9
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 3.9e-51 205.3 163 63.8
THA.LOC104809657 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 3.9e-51 205.3 161 66.5
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 5.1e-51 204.9 162 64.2
CSS0022681 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 8.7e-51 204.1 161 63.4
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 8.7e-51 204.1 162 66.0
Solyc08g007950.3 Solanum lycopersicum HOM05D005566 ORTHO05D007534 8.7e-51 204.1 162 65.4
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 1.1e-50 203.8 161 65.2
Migut.A00792 Erythranthe guttata HOM05D005566 ORTHO05D007534 1.1e-50 203.8 161 62.7
Nitab4.5_0001200g0190 Nicotiana tabacum HOM05D005566 ORTHO05D007534 1.5e-50 203.4 161 64.6
Ca_17550_v3 Cicer arietinum L. HOM05D005566 ORTHO05D007534 1.9e-50 203.0 162 62.3
PSO782G1537 Papaver somniferum HOM05D005566 ORTHO05D007534 1.9e-50 203.0 162 63.6
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 3.3e-50 202.2 158 64.6
Sc22g0000210 Simmondsia chinensis HOM05D005566 ORTHO05D007534 5.7e-50 201.4 159 61.6
VMungo0251G1600 Vigna mungo HOM05D005566 ORTHO05D007534 7.4e-50 201.1 162 61.7
Medtr8g097290 Medicago truncatula HOM05D005566 ORTHO05D007534 1.6e-49 199.9 162 61.7
unitig_744.g24358 Utricularia gibba HOM05D005566 ORTHO05D007534 1.6e-49 199.9 163 64.4
Actinidia02022 Actinidia chinensis HOM05D005566 ORTHO05D007534 3.7e-49 198.7 161 65.2
TPR.G12738 Trifolium pratense HOM05D005566 ORTHO05D007534 1.8e-48 196.4 159 61.0
Actinidia27393 Actinidia chinensis HOM05D005566 ORTHO05D007534 4.1e-48 195.3 157 60.5
DCAR_008409 Daucus carota HOM05D005566 ORTHO05D007534 9.0e-48 194.1 163 62.6
Phvul.002G287600 Phaseolus vulgaris HOM05D005566 ORTHO05D007534 1.0e-46 190.7 162 57.4
Glyma.05G205700 Glycine max HOM05D005566 ORTHO05D007534 3.8e-46 188.7 149 65.8
Lj2A187T86 Lonicera japonica HOM05D005566 ORTHO05D007534 6.5e-46 188.0 163 58.3
SGA_v2.0_scaffold253G45116 Striga asiatica HOM05D005566 ORTHO05D007534 5.5e-45 184.9 189 52.4
ATR0680G084 Amborella trichopoda HOM05D005566 ORTHO05D007534 7.2e-45 184.5 162 56.8
HanXRQChr06g0165791 Helianthus annuus HOM05D005566 ORTHO05D007534 2.1e-44 183.0 157 57.3
CDE05G3632 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 2.7e-44 182.6 159 59.1
Lsat_1_v5_gn_3_7621 Lactuca sativa HOM05D005566 ORTHO05D007534 7.9e-44 181.0 145 63.4
vmacro11305 Vaccinium macrocarpon HOM05D005566 ORTHO05D007534 1.8e-43 179.9 161 55.3
CDE08G0014 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 6.7e-43 177.9 157 56.1
Os02g0115600 Oryza sativa ssp. japonica HOM05D005566 ORTHO05D007534 2.0e-42 176.4 162 53.1
Zm00001eb229900 Zea mays HOM05D005566 ORTHO05D007534 5.7e-42 174.9 162 51.2
DCAR_004649 Daucus carota HOM05D005566 ORTHO05D007534 8.2e-41 171.0 158 53.2
Cpa.g.sc76.21 Carica papaya HOM05D005566 ORTHO05D007534 1.4e-40 170.2 140 62.1
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 1.4e-37 160.2 161 52.2
Hund11490 Selenicereus undatus HOM05D005566 ORTHO05D007534 5.5e-37 158.3 160 52.5
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 2.0e-34 149.8 163 51.5
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 2.2e-33 146.4 162 50.0
HPP92_014800 Vanilla planifolia HOM05D005566 ORTHO05D007534 7.0e-32 141.4 158 45.6
C08p15640 Brassica napus HOM05D005566 ORTHO05D007534 7.2e-21 104.8 121 50.4
BolC8t49191H Brassica oleracea HOM05D005566 ORTHO05D007534 7.2e-21 104.8 121 50.4
ECA233G5767 Erigeron canadensis HOM05D005566 ORTHO05D007534 9.4e-21 104.4 101 58.4
arahy.Tifrunner.gnm1.ann1.SR6UK4 Arachis hypogaea HOM05D005566 ORTHO05D007534 4.0e-19 99.0 89 57.3
SEGI_27473 Sequoiadendron giganteum HOM05D005566 ORTHO05D007534 2.0e-18 96.7 148 37.8
Pp3c9_24810 Physcomitrium patens HOM05D005566 ORTHO05D007534 5.0e-14 82.0 160 35.0
Pp3c15_23440 Physcomitrium patens HOM05D005566 ORTHO05D007534 1.2e-12 77.4 159 33.3
AagrBONN_evm.TU.Sc2ySwM_117.842 Anthoceros agrestis HOM05D005566 ORTHO05D007534 2.1e-12 76.6 164 31.1
Mapoly0023s0130 Marchantia polymorpha HOM05D005566 ORTHO05D007534 8.0e-12 74.7 174 33.3
Glyma.06G293800 Glycine max HOM05D005566 ORTHO05D007534 7.5e-10 68.2 38 78.9


User provided reference genes

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