Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1092600 Malus domestica HOM05D001397 ORTHO05D246393 2.5e-101 372.1 187 100.0
Sabra10G0026100 Salix brachista HOM05D001397 ORTHO05D001300 3.3e-16 89.4 99 51.5
Potri.010G041200 Populus trichocarpa HOM05D001397 ORTHO05D001300 2.1e-15 86.7 99 49.5
FAN12G4322 Fragaria x ananassa HOM05D001397 ORTHO05D001300 3.4e-13 79.3 120 44.2
FAN22G1542 Fragaria x ananassa HOM05D001397 ORTHO05D001300 4.4e-13 79.0 124 43.5
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 2.2e-12 76.6 120 41.7
Manes.12G028300 Manihot esculenta HOM05D001397 ORTHO05D001300 3.7e-12 75.9 124 40.3
A06p07420 Brassica napus HOM05D001397 ORTHO05D001300 8.4e-12 74.7 145 35.9
Atru.chr11.2036 Acer truncatum HOM05D001397 ORTHO05D001300 1.4e-11 73.9 145 37.2
Duzib268G0492 Durio zibethinus HOM05D001397 ORTHO05D001300 2.4e-11 73.2 148 35.8
Duzib251G0017 Durio zibethinus HOM05D001397 ORTHO05D001300 3.2e-11 72.8 147 36.1
MD16G1093400 Malus domestica HOM05D001397 ORTHO05D001300 3.2e-11 72.8 145 37.9
Dinv15288 Davidia involucrata HOM05D001397 ORTHO05D001300 7.1e-11 71.6 120 39.2
Lj2g0010503 Lotus japonicus HOM05D001397 ORTHO05D001300 9.2e-11 71.2 145 37.9
FAN07G0371 Fragaria x ananassa HOM05D001397 ORTHO05D001300 1.2e-10 70.9 145 37.2
TPR.G21089 Trifolium pratense HOM05D001397 ORTHO05D001300 1.2e-10 70.9 145 37.9
Medtr5g034240 Medicago truncatula HOM05D001397 ORTHO05D001300 1.6e-10 70.5 145 37.9
Psat2g103120 Pisum sativum HOM05D001397 ORTHO05D001300 1.6e-10 70.5 145 37.9
RcHm_v2.0_Chr4g0443791 Rosa chinensis HOM05D001397 ORTHO05D001300 1.6e-10 70.5 145 37.9
Lalb_Chr05g0216871 Lupinus albus HOM05D001397 ORTHO05D001300 2.1e-10 70.1 145 37.9
arahy.Tifrunner.gnm1.ann1.HL6MYD Arachis hypogaea HOM05D001397 ORTHO05D001300 2.7e-10 69.7 149 36.2
FvH4_4g34380 Fragaria vesca HOM05D001397 ORTHO05D001300 2.7e-10 69.7 145 36.6
Glyma.01G030400 Glycine max HOM05D001397 ORTHO05D001300 4.6e-10 68.9 145 37.2
QL03p060200 Quercus lobata HOM05D001397 ORTHO05D001300 6.0e-10 68.6 145 35.9
GSVIVG01013737001 Vitis vinifera HOM05D001397 ORTHO05D001300 6.0e-10 68.6 145 35.9
Thecc.02G250800 Theobroma cacao HOM05D001397 ORTHO05D001300 7.8e-10 68.2 145 35.2
Prupe.1G253200 Prunus persica HOM05D001397 ORTHO05D001300 1.0e-09 67.8 115 43.5
Ca_13994_v3 Cicer arietinum L. HOM05D001397 ORTHO05D001300 1.3e-09 67.4 145 36.6
Aa31LG5G8520 Aethionema arabicum HOM05D001397 ORTHO05D004308 1.7e-09 67.0 54 55.6
Eucgr.B03319 Eucalyptus grandis HOM05D001397 ORTHO05D001300 1.7e-09 67.0 145 36.6
Gohir.A03G139200 Gossypium hirsutum HOM05D001397 ORTHO05D001300 2.3e-09 66.6 145 34.5
Gohir.D02G162100 Gossypium hirsutum HOM05D001397 ORTHO05D001300 2.3e-09 66.6 145 34.5
Gorai.005G182100 Gossypium raimondii HOM05D001397 ORTHO05D001300 2.3e-09 66.6 145 34.5
TAR374G1335 Trochodendron aralioides HOM05D001397 ORTHO05D001300 2.3e-09 66.6 145 34.5
CANSAT01G2164 Cannabis sativa HOM05D001397 ORTHO05D001300 3.0e-09 66.2 145 35.2
Cpa.g.sc69.46 Carica papaya HOM05D001397 ORTHO05D001300 3.0e-09 66.2 145 34.5
Nn4g22772 Nelumbo nucifera HOM05D001397 ORTHO05D001300 3.0e-09 66.2 145 34.5
Rhsim12G0046300 Rhododendron simsii HOM05D001397 ORTHO05D001300 3.9e-09 65.9 145 35.2
TWI36G0674 Tripterygium wilfordii HOM05D001397 ORTHO05D001300 5.1e-09 65.5 145 35.2
Cfa009150 Carpinus fangiana HOM05D001397 ORTHO05D001300 6.6e-09 65.1 145 35.2
PSO478G4193 Papaver somniferum HOM05D001397 ORTHO05D001300 6.6e-09 65.1 145 33.1
CiPaw.05G151500 Carya illinoinensis HOM05D001397 ORTHO05D001300 1.1e-08 64.3 143 35.0
THA.LOC104823645 Tarenaya hassleriana HOM05D001397 ORTHO05D001300 1.5e-08 63.9 145 33.8
HanXRQChr12g0383511 Helianthus annuus HOM05D001397 ORTHO05D001300 1.9e-08 63.5 145 33.8
arahy.Tifrunner.gnm1.ann1.4JWU9M Arachis hypogaea HOM05D001397 ORTHO05D001300 2.5e-08 63.2 145 35.9
Lsat_1_v5_gn_4_5661 Lactuca sativa HOM05D001397 ORTHO05D001300 2.5e-08 63.2 145 33.8
VMungo1215G3354 Vigna mungo HOM05D001397 ORTHO05D001300 2.5e-08 63.2 145 35.2
BraA06t23946Z Brassica rapa HOM05D001397 ORTHO05D001300 3.3e-08 62.8 145 33.8
Thhalv10008718m.g Eutrema salsugineum HOM05D001397 ORTHO05D001300 3.3e-08 62.8 145 33.1
Glyma.02G035100 Glycine max HOM05D001397 ORTHO05D001300 3.3e-08 62.8 145 35.2
Sp1g09280 Schrenkiella parvula HOM05D001397 ORTHO05D001300 4.3e-08 62.4 145 33.8
BcaC05g24858 Brassica carinata HOM05D001397 ORTHO05D001300 5.6e-08 62.0 145 33.1
C05p08920 Brassica napus HOM05D001397 ORTHO05D001300 5.6e-08 62.0 145 33.1
BolC5t29640H Brassica oleracea HOM05D001397 ORTHO05D001300 5.6e-08 62.0 145 33.1
Phvul.002G071100 Phaseolus vulgaris HOM05D001397 ORTHO05D001300 5.6e-08 62.0 106 40.6
PGR102G2285 Punica granatum HOM05D001397 ORTHO05D001300 5.6e-08 62.0 163 31.9
BcaC05g24949 Brassica carinata HOM05D001397 ORTHO05D001300 7.3e-08 61.6 145 33.1
Ah.02g114980 Amaranthus hybridus HOM05D001397 ORTHO05D001300 9.6e-08 61.2 120 36.7
AL1G21450 Arabidopsis lyrata HOM05D001397 ORTHO05D001300 1.2e-07 60.8 145 32.4
AT1G10600 Arabidopsis thaliana HOM05D001397 ORTHO05D001300 1.2e-07 60.8 145 32.4
Carub.0001s1007 Capsella rubella HOM05D001397 ORTHO05D001300 1.2e-07 60.8 145 32.4
Hma1.2p1_0536F.1_g174010 Hydrangea macrophylla HOM05D001397 ORTHO05D001300 1.2e-07 60.8 145 32.4
ATR0730G168 Amborella trichopoda HOM05D001397 ORTHO05D001300 1.6e-07 60.5 145 32.4
Ciclev10032455m.g Citrus clementina HOM05D001397 ORTHO05D001300 2.1e-07 60.1 169 30.2
Actinidia08164 Actinidia chinensis HOM05D001397 ORTHO05D001300 2.8e-07 59.7 145 32.4
CSS0013147 Camellia sinensis var. sinensis HOM05D001397 ORTHO05D001300 2.8e-07 59.7 145 32.4
Aa31LG1G4300 Aethionema arabicum HOM05D001397 ORTHO05D001300 3.6e-07 59.3 145 32.4
Aqoxy3G02954 Aquilegia oxysepala HOM05D001397 ORTHO05D001300 3.6e-07 59.3 145 31.7
PSO063G2777 Papaver somniferum HOM05D001397 ORTHO05D001300 6.2e-07 58.5 145 31.0
PSO832G2672 Papaver somniferum HOM05D001397 ORTHO05D001300 6.2e-07 58.5 145 31.0
DCAR_023210 Daucus carota HOM05D001397 ORTHO05D001300 1.1e-06 57.8 145 31.0
COL.COLO4_04902 Corchorus olitorius HOM05D001397 ORTHO05D001300 1.4e-06 57.4 117 33.3
AUR62005385 Chenopodium quinoa HOM05D001397 ORTHO05D001300 2.4e-06 56.6 145 31.0
ATR1125G122 Amborella trichopoda HOM05D001397 ORTHO05D001300 3.1e-06 56.2 145 30.3
arahy.Tifrunner.gnm1.ann1.U37EF8 Arachis hypogaea HOM05D001397 ORTHO05D001300 4.0e-06 55.8 147 29.3
SEGI_28241 Sequoiadendron giganteum HOM05D001397 ORTHO05D001300 4.0e-06 55.8 145 31.7
ATR0706G159 Amborella trichopoda HOM05D001397 ORTHO05D001300 5.2e-06 55.5 145 30.3
arahy.Tifrunner.gnm1.ann1.0BB5XM Arachis hypogaea HOM05D001397 ORTHO05D001300 6.8e-06 55.1 145 29.7
Ca_25483_v3 Cicer arietinum L. HOM05D001397 ORTHO05D001300 6.8e-06 55.1 145 29.7
Ca_29724_v3 Cicer arietinum L. HOM05D001397 ORTHO05D001300 6.8e-06 55.1 145 29.7
MELO3C002093.2 Cucumis melo HOM05D001397 ORTHO05D001300 6.8e-06 55.1 143 30.8
Glyma.05G237800 Glycine max HOM05D001397 ORTHO05D001300 8.9e-06 54.7 145 29.7
Glyma.08G044900 Glycine max HOM05D001397 ORTHO05D001300 8.9e-06 54.7 145 29.7


User provided reference genes

Program Settings