Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1091500 Malus domestica HOM05D001292 ORTHO05D001202 7.3e-184 647.1 333 100.0
Prupe.1G254600 Prunus persica HOM05D001292 ORTHO05D001202 1.2e-56 224.6 302 49.3
FAN12G1507 Fragaria x ananassa HOM05D001292 ORTHO05D001202 1.2e-45 188.0 348 39.7
FAN17G1642 Fragaria x ananassa HOM05D001292 ORTHO05D001202 2.1e-45 187.2 348 40.8
FvH4_4g34560 Fragaria vesca HOM05D001292 ORTHO05D001202 7.8e-45 185.3 347 37.8
FAN07G2035 Fragaria x ananassa HOM05D001292 ORTHO05D001202 6.6e-44 182.2 347 40.3
TWI18G1467 Tripterygium wilfordii HOM05D001292 ORTHO05D001202 7.3e-43 178.7 351 40.5
FAN22G1387 Fragaria x ananassa HOM05D001292 ORTHO05D001202 2.4e-41 173.7 361 39.1
RcHm_v2.0_Chr4g0443941 Rosa chinensis HOM05D001292 ORTHO05D001202 1.9e-38 164.1 348 37.9
TAR374G1183 Trochodendron aralioides HOM05D001292 ORTHO05D001202 6.6e-36 155.6 349 38.7
Nn4g22805 Nelumbo nucifera HOM05D001292 ORTHO05D001202 3.3e-35 153.3 308 38.3
CiPaw.05G150600 Carya illinoinensis HOM05D001292 ORTHO05D001202 2.4e-33 147.1 351 37.3
Duzib248G1000 Durio zibethinus HOM05D001292 ORTHO05D001202 1.5e-32 144.4 349 36.1
Potri.010G040600 Populus trichocarpa HOM05D001292 ORTHO05D001202 5.8e-32 142.5 351 34.5
Actinidia15043 Actinidia chinensis HOM05D001292 ORTHO05D001202 3.8e-31 139.8 297 37.4
Gohir.A04G135200 Gossypium hirsutum HOM05D001292 ORTHO05D001202 3.8e-31 139.8 347 36.0
Actinidia13513 Actinidia chinensis HOM05D001292 ORTHO05D001202 4.9e-31 139.4 281 39.5
Dinv15305 Davidia involucrata HOM05D001292 ORTHO05D001202 6.4e-31 139.0 386 33.2
Cfa009140 Carpinus fangiana HOM05D001292 ORTHO05D001202 1.1e-30 138.3 313 37.7
Gohir.D04G178300 Gossypium hirsutum HOM05D001292 ORTHO05D001202 1.9e-30 137.5 290 38.6
Gorai.012G171400 Gossypium raimondii HOM05D001292 ORTHO05D001202 3.2e-30 136.7 290 38.3
QL03p061415 Quercus lobata HOM05D001292 ORTHO05D001202 1.2e-29 134.8 321 37.1
Sabra10G0026500 Salix brachista HOM05D001292 ORTHO05D001202 1.2e-29 134.8 363 34.7
Ciclev10031081m.g Citrus clementina HOM05D001292 ORTHO05D001202 7.9e-29 132.1 359 34.0
ClCG05G025290 Citrullus lanatus HOM05D001292 ORTHO05D001202 5.1e-28 129.4 296 36.5
Thecc.02G248100 Theobroma cacao HOM05D001292 ORTHO05D001202 2.5e-27 127.1 293 36.9
Atru.chr11.2015 Acer truncatum HOM05D001292 ORTHO05D001202 3.6e-26 123.2 353 33.1
Haze_12172 Corylus avellana HOM05D001292 ORTHO05D001202 4.8e-26 122.9 361 36.3
GSVIVG01020234001 Vitis vinifera HOM05D001292 ORTHO05D001202 1.1e-25 121.7 245 39.2
CsaV3_5G031600 Cucumis sativus L. HOM05D001292 ORTHO05D001202 3.4e-24 116.7 344 30.5
CSS0024382 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D001202 1.1e-22 111.7 279 36.2
Sc11g0001210 Simmondsia chinensis HOM05D001292 ORTHO05D001202 4.2e-22 109.8 316 33.5
CANSAT01G2663 Cannabis sativa HOM05D001292 ORTHO05D001202 9.3e-22 108.6 355 32.1
MBI16_g36056_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 1.2e-21 108.2 286 35.0
Lj4g0026951 Lotus japonicus HOM05D001292 ORTHO05D001202 1.6e-21 107.8 348 31.0
Phvul.003G052200 Phaseolus vulgaris HOM05D001292 ORTHO05D001202 3.5e-21 106.7 302 31.5
vmacro16254 Vaccinium macrocarpon HOM05D001292 ORTHO05D001202 6.0e-21 105.9 316 32.6
MELO3C012000.2 Cucumis melo HOM05D001292 ORTHO05D001202 7.9e-21 105.5 340 28.2
Sed0021630 Sechium edule HOM05D001292 ORTHO05D001202 2.3e-20 104.0 356 29.8
CSS0049204 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D001202 1.1e-19 101.7 246 36.2
Psat4g125280 Pisum sativum HOM05D001292 ORTHO05D001202 1.1e-19 101.7 285 31.6
VMungo0251G2116 Vigna mungo HOM05D001292 ORTHO05D001202 1.5e-19 101.3 306 31.0
Aqoxy3G02988 Aquilegia oxysepala HOM05D001292 ORTHO05D001202 4.3e-19 99.8 348 33.0
Rhsim12G0121000 Rhododendron simsii HOM05D001292 ORTHO05D001202 7.4e-19 99.0 294 31.6
TPR.G32100 Trifolium pratense HOM05D001292 ORTHO05D001202 7.4e-19 99.0 358 30.2
Medtr8g064470 Medicago truncatula HOM05D001292 ORTHO05D001202 1.3e-18 98.2 352 31.0
Manes.12G029500 Manihot esculenta HOM05D001292 ORTHO05D001202 1.6e-18 97.8 153 43.8
Lalb_Chr09g0335011 Lupinus albus HOM05D001292 ORTHO05D001202 2.1e-18 97.4 271 29.9
Manes.13G030900 Manihot esculenta HOM05D001292 ORTHO05D001202 2.1e-18 97.4 156 42.3
Eucgr.H02612 Eucalyptus grandis HOM05D001292 ORTHO05D001202 8.1e-18 95.5 345 29.6
Sp2g04460 Schrenkiella parvula HOM05D001292 ORTHO05D001202 2.4e-17 94.0 318 28.0
SpUn0106_0010 Schrenkiella parvula HOM05D001292 ORTHO05D001202 2.4e-17 94.0 318 28.0
Ca_22729_v3 Cicer arietinum L. HOM05D001292 ORTHO05D001202 1.2e-16 91.7 352 29.0
Glyma.18G137700 Glycine max HOM05D001292 ORTHO05D001202 1.2e-16 91.7 313 30.7
THA.LOC104823662 Tarenaya hassleriana HOM05D001292 ORTHO05D001202 3.4e-16 90.1 348 29.9
Nitab4.5_0000113g0260 Nicotiana tabacum HOM05D001292 ORTHO05D001202 1.3e-15 88.2 333 30.6
BcaC04g22220 Brassica carinata HOM05D001292 ORTHO05D001202 3.8e-15 86.7 294 29.9
PGR119G2170 Punica granatum HOM05D001292 ORTHO05D001202 3.8e-15 86.7 336 29.8
BolC9t55101H Brassica oleracea HOM05D001292 ORTHO05D001202 4.9e-15 86.3 294 29.9
Nitab4.5_0002579g0090 Nicotiana tabacum HOM05D001292 ORTHO05D001202 4.9e-15 86.3 334 28.7
MSTRG.7894 Avicennia marina HOM05D001292 ORTHO05D001202 1.1e-14 85.1 353 27.8
Aa31LG2G10100 Aethionema arabicum HOM05D001292 ORTHO05D001202 1.9e-14 84.3 355 28.7
BcaB07g31205 Brassica carinata HOM05D001292 ORTHO05D001202 3.2e-14 83.6 304 27.6
Hund25343 Selenicereus undatus HOM05D001292 ORTHO05D001202 3.2e-14 83.6 304 31.6
Glyma.08G287800 Glycine max HOM05D001292 ORTHO05D001202 4.2e-14 83.2 297 28.6
C09p21960 Brassica napus HOM05D001292 ORTHO05D001202 9.3e-14 82.0 294 28.9
arahy.Tifrunner.gnm1.ann1.UYF69H Arachis hypogaea HOM05D001292 ORTHO05D001202 1.2e-13 81.6 352 29.3
Dinv24863 Davidia involucrata HOM05D001292 ORTHO05D001202 1.6e-13 81.3 188 35.1
arahy.Tifrunner.gnm1.ann1.XAFC77 Arachis hypogaea HOM05D001292 ORTHO05D001202 3.5e-13 80.1 335 28.4
ATR0730G146 Amborella trichopoda HOM05D001292 ORTHO05D001202 4.6e-13 79.7 287 32.1
Aa31LG1G4360 Aethionema arabicum HOM05D001292 ORTHO05D001202 6.0e-13 79.3 338 29.3
SGA_v2.0_scaffold165G38250 Striga asiatica HOM05D001292 ORTHO05D001202 7.9e-13 79.0 314 28.0
AT1G60220 Arabidopsis thaliana HOM05D001292 ORTHO05D001202 1.0e-12 78.6 311 28.9
AUR62005372 Chenopodium quinoa HOM05D001292 ORTHO05D001202 2.3e-12 77.4 350 29.4
Migut.L01409 Erythranthe guttata HOM05D001292 ORTHO05D001202 3.9e-12 76.6 346 28.9
Thhalv10023376m.g Eutrema salsugineum HOM05D001292 ORTHO05D001202 3.9e-12 76.6 351 27.9
CAN.G376.11 Capsicum annuum HOM05D001292 ORTHO05D001202 1.5e-11 74.7 322 30.1
PSO832G2131 Papaver somniferum HOM05D001292 ORTHO05D001202 1.9e-11 74.3 353 28.6
MSTRG.597 Avicennia marina HOM05D001292 ORTHO05D001202 3.3e-11 73.6 356 29.2
CDE06G2008 Ceratophyllum demersum HOM05D001292 ORTHO05D001202 3.3e-11 73.6 277 29.2
SGA_v2.0_scaffold8G04227 Striga asiatica HOM05D001292 ORTHO05D001202 4.3e-11 73.2 308 29.2
CDE04G1081 Ceratophyllum demersum HOM05D001292 ORTHO05D001202 5.7e-11 72.8 289 29.8
Lsat_1_v5_gn_3_48100 Lactuca sativa HOM05D001292 ORTHO05D001202 5.7e-11 72.8 353 29.7
Sopen05g001630 Solanum pennellii HOM05D001292 ORTHO05D001202 5.7e-11 72.8 291 29.9
Oeu056395.2 Olea europaea HOM05D001292 ORTHO05D001202 7.4e-11 72.4 329 28.9
PSO063G4088 Papaver somniferum HOM05D001292 ORTHO05D001202 1.6e-10 71.2 355 27.6
AL2G16440 Arabidopsis lyrata HOM05D001292 ORTHO05D001202 3.7e-10 70.1 390 24.6
Thhalv10007260m.g Eutrema salsugineum HOM05D001292 ORTHO05D001202 3.7e-10 70.1 322 27.3
A09p17630 Brassica napus HOM05D001292 ORTHO05D001202 1.4e-09 68.2 361 25.5
EL10Ac6g13669 Beta vulgaris HOM05D001292 ORTHO05D001202 2.4e-09 67.4 352 27.3
BraA09t37393Z Brassica rapa HOM05D001292 ORTHO05D001202 2.4e-09 67.4 313 25.6
Carub.0002s0503 Capsella rubella HOM05D001292 ORTHO05D001202 2.4e-09 67.4 321 27.7
Lsat_1_v5_gn_8_157321 Lactuca sativa HOM05D001292 ORTHO05D001202 4.1e-09 66.6 384 28.6
COL.COLO4_36969 Corchorus olitorius HOM05D001292 ORTHO05D001202 6.9e-09 65.9 125 36.0
Ah.02g129890 Amaranthus hybridus HOM05D001292 ORTHO05D001202 2.0e-08 64.3 292 28.4
Sp1g09220 Schrenkiella parvula HOM05D001292 ORTHO05D001202 2.0e-08 64.3 337 27.6
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 3.4e-08 63.5 76 48.7
Nitab4.5_0004636g0020 Nicotiana tabacum HOM05D001292 ORTHO05D001202 5.8e-08 62.8 207 31.4
ECA233G2320 Erigeron canadensis HOM05D001292 ORTHO05D001202 7.6e-08 62.4 298 28.2
HanXRQChr15g0490121 Helianthus annuus HOM05D001292 ORTHO05D001202 1.0e-07 62.0 288 29.9
C05p08830 Brassica napus HOM05D001292 ORTHO05D001202 3.8e-07 60.1 358 26.0
CARHR010730 Cardamine hirsuta HOM05D001292 ORTHO05D001202 3.8e-07 60.1 325 26.2
FvH4_5g04041 Fragaria vesca HOM05D012149 ORTHO05D014637 5.0e-07 59.7 79 44.3
AL1G21390 Arabidopsis lyrata HOM05D001292 ORTHO05D001202 8.4e-07 58.9 378 26.5
A06p07320 Brassica napus HOM05D001292 ORTHO05D001202 1.4e-06 58.2 316 27.2
CAN.G60.9 Capsicum annuum HOM05D001292 ORTHO05D001202 1.4e-06 58.2 336 26.8
HanXRQChr12g0368581 Helianthus annuus HOM05D001292 ORTHO05D001202 2.5e-06 57.4 278 25.9
Peaxi162Scf00338g00116 Petunia axillaris HOM05D001292 ORTHO05D001202 3.2e-06 57.0 251 30.7
AT1G10570 Arabidopsis thaliana HOM05D001292 ORTHO05D001202 4.2e-06 56.6 365 25.8
Cc11_g14630 Coffea canephora HOM05D001292 ORTHO05D001202 7.2e-06 55.8 83 42.2


User provided reference genes

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