Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 6.3e-143 510.8 259 100.0
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 9.9e-104 380.6 272 74.6
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.2e-96 357.1 261 68.6
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 7.1e-94 347.8 261 67.0
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 3.9e-84 315.5 264 61.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.5e-83 313.5 264 61.7
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.1e-81 307.4 261 60.5
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 6.9e-81 304.7 263 61.2
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.9e-79 299.3 262 58.8
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 4.9e-79 298.5 261 58.2
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 3.2e-78 295.8 260 59.6
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.6e-77 293.5 230 64.3
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 2.7e-77 292.7 260 58.8
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 3.9e-76 288.9 258 56.6
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.3e-75 285.8 230 63.0
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 4.3e-75 285.4 263 57.0
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 6.2e-74 281.6 263 55.1
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 8.1e-74 281.2 260 54.6
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.1e-73 280.8 262 53.8
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.4e-73 280.4 256 55.9
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 2.4e-73 279.6 251 55.8
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 3.1e-73 279.3 264 53.8
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.1e-73 279.3 260 57.7
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 6.9e-73 278.1 264 54.2
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 6.9e-73 278.1 261 55.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.2e-72 277.3 264 54.9
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.5e-72 276.9 260 54.6
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.8e-72 275.0 257 56.8
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 9.9e-72 274.2 247 57.5
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.7e-71 273.5 261 53.3
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.9e-71 271.9 253 53.4
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.1e-70 270.8 250 57.6
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.5e-70 268.5 254 57.1
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.2e-69 267.3 251 56.2
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 2.1e-69 266.5 243 60.9
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 6.0e-69 265.0 264 51.1
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 3.9e-68 262.3 251 55.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 3.9e-68 262.3 222 59.9
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 6.7e-68 261.5 288 49.0
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 3.3e-67 259.2 255 52.5
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.3e-66 257.3 256 52.3
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.3e-66 257.3 254 52.8
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.6e-66 256.9 251 55.4
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.8e-66 255.4 248 54.0
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.8e-65 253.4 256 52.0
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 4.0e-65 252.3 258 53.5
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 6.9e-65 251.5 252 52.8
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.2e-64 250.8 250 52.4
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.6e-64 249.6 258 51.6
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 7.6e-64 248.1 255 51.8
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 7.6e-64 248.1 254 51.2
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.7e-63 246.9 258 50.8
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.2e-63 246.5 251 52.2
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 2.9e-63 246.1 244 53.7
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.9e-63 246.1 254 51.2
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 3.8e-63 245.7 258 50.8
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 8.4e-63 244.6 254 51.6
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.9e-62 243.4 253 51.0
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 4.2e-62 242.3 257 51.8
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 4.2e-62 242.3 255 51.0
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.2e-62 242.3 203 63.1
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.2e-61 240.7 250 50.4
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.2e-61 240.7 263 47.1
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 1.2e-61 240.7 257 50.2
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.6e-61 240.4 239 54.8
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 1.0e-60 237.7 265 48.3
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.5e-59 233.0 260 48.8
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 7.4e-59 231.5 255 48.2
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 4.8e-58 228.8 203 59.6
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 8.2e-58 228.0 260 47.7
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.4e-57 227.3 260 48.1
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.8e-57 226.9 281 45.9
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 3.1e-57 226.1 247 50.6
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 3.1e-57 226.1 232 52.6
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 4.1e-57 225.7 202 58.9
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.3e-55 220.7 258 46.9
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.4e-54 217.2 198 54.5
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 2.5e-54 216.5 225 52.0
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 3.2e-54 216.1 217 55.3
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 4.2e-54 215.7 250 49.6
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 9.4e-54 214.5 280 42.9
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.0e-52 211.1 259 44.0
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 7.4e-51 204.9 182 59.3
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 9.7e-51 204.5 211 49.3
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.7e-50 203.8 256 45.3
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 3.1e-49 199.5 208 51.9
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 2.6e-48 196.4 258 43.8
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 1.7e-47 193.7 268 41.8
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.1e-46 191.0 235 45.1
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.8e-44 183.7 219 48.9
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 5.3e-41 172.2 168 53.0
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 9.1e-41 171.4 186 48.9
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 4.5e-40 169.1 170 52.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 6.5e-39 165.2 166 53.6
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.0e-31 141.4 141 56.7
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 2.7e-24 116.7 105 57.1
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 3.7e-18 96.3 85 54.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 8.3e-18 95.1 256 31.2
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.0e-08 63.9 47 61.7
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.0e-08 63.9 47 61.7
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 4.3e-06 56.2 93 39.8


User provided reference genes

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