Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1270900 Malus domestica HOM05D000032 ORTHO05D008248 5.0e-76 287.7 150 100.0
Prupe.5G037600 Prunus persica HOM05D000032 ORTHO05D008248 4.3e-43 178.3 129 71.3
MD14G1084300 Malus domestica HOM05D000032 ORTHO05D008248 2.1e-42 176.0 129 71.3
MD12G1094500 Malus domestica HOM05D000032 ORTHO05D008248 2.8e-42 175.6 129 71.3
Dinv29787 Davidia involucrata HOM05D000032 ORTHO05D008248 3.2e-38 162.2 129 64.3
CSS0002689 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D008248 3.0e-36 155.6 129 61.2
CSS0035942 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D008248 3.0e-36 155.6 129 61.2
Cfa014812 Carpinus fangiana HOM05D000032 ORTHO05D008248 6.7e-36 154.5 129 60.5
Haze_11492 Corylus avellana HOM05D000032 ORTHO05D008248 3.3e-35 152.1 129 59.7
CANSAT78G0248 Cannabis sativa HOM05D000032 ORTHO05D008248 5.6e-35 151.4 129 62.0
Hma1.2p1_0112F.1_g054935 Hydrangea macrophylla HOM05D000032 ORTHO05D008248 9.6e-35 150.6 129 59.7
Hma1.2p1_0112F.1_g054940 Hydrangea macrophylla HOM05D000032 ORTHO05D008248 9.6e-35 150.6 129 59.7
vmacro00534 Vaccinium macrocarpon HOM05D000032 ORTHO05D008248 9.6e-35 150.6 129 57.4
CiPaw.01G175600 Carya illinoinensis HOM05D000032 ORTHO05D008248 2.1e-34 149.4 129 58.9
RcHm_v2.0_Chr3g0492441 Rosa chinensis HOM05D000032 ORTHO05D008248 2.1e-34 149.4 129 63.6
THA.LOC104802593 Tarenaya hassleriana HOM05D000032 ORTHO05D008248 2.8e-34 149.1 129 58.9
FAN28G1398 Fragaria x ananassa HOM05D000032 ORTHO05D008248 8.1e-34 147.5 129 62.8
Ah.04g153530 Amaranthus hybridus HOM05D000032 ORTHO05D008248 1.1e-33 147.1 129 58.1
GSVIVG01027957001 Vitis vinifera HOM05D000032 ORTHO05D008248 1.4e-33 146.7 129 57.4
Potri.010G063600 Populus trichocarpa HOM05D000032 ORTHO05D008248 3.1e-33 145.6 129 58.9
Lalb_Chr10g0097291 Lupinus albus HOM05D000032 ORTHO05D008248 4.0e-33 145.2 129 56.6
TAR365G0107 Trochodendron aralioides HOM05D000032 ORTHO05D008248 4.0e-33 145.2 129 58.9
Rhsim09G0043500 Rhododendron simsii HOM05D000032 ORTHO05D008248 5.3e-33 144.8 129 55.0
FvH4_1g29910 Fragaria vesca HOM05D000032 ORTHO05D008248 9.0e-33 144.1 129 61.2
FAN19G1189 Fragaria x ananassa HOM05D000032 ORTHO05D008248 9.0e-33 144.1 129 61.2
FAN23G0160 Fragaria x ananassa HOM05D000032 ORTHO05D008248 9.0e-33 144.1 129 62.0
Glyma.07G074800 Glycine max HOM05D000032 ORTHO05D008248 9.0e-33 144.1 129 55.0
Sabra10G0043300 Salix brachista HOM05D000032 ORTHO05D008248 9.0e-33 144.1 129 58.1
Ciclev10004340m.g Citrus clementina HOM05D000032 ORTHO05D008248 1.2e-32 143.7 129 58.9
TWI73G0114 Tripterygium wilfordii HOM05D000032 ORTHO05D008248 1.2e-32 143.7 129 58.9
Atru.chr4.1879 Acer truncatum HOM05D000032 ORTHO05D008248 2.6e-32 142.5 129 55.8
Lj3g0023133 Lotus japonicus HOM05D000032 ORTHO05D008248 3.4e-32 142.1 130 56.2
arahy.Tifrunner.gnm1.ann1.15AJKM Arachis hypogaea HOM05D000032 ORTHO05D008248 5.8e-32 141.4 129 55.0
arahy.Tifrunner.gnm1.ann1.W310LH Arachis hypogaea HOM05D000032 ORTHO05D008248 1.3e-31 140.2 129 55.0
Sc13g0003050 Simmondsia chinensis HOM05D000032 ORTHO05D008248 2.2e-31 139.4 129 56.6
Duzib151G1189 Durio zibethinus HOM05D000032 ORTHO05D008248 2.9e-31 139.0 129 55.8
Lj3C638G9 Lonicera japonica HOM05D000032 ORTHO05D008248 2.9e-31 139.0 129 58.1
Manes.15G047300 Manihot esculenta HOM05D000032 ORTHO05D008248 2.9e-31 139.0 118 63.6
Hund20473 Selenicereus undatus HOM05D000032 ORTHO05D008248 2.9e-31 139.0 129 55.0
TPR.G9295 Trifolium pratense HOM05D000032 ORTHO05D008248 2.9e-31 139.0 129 55.0
Eucgr.H02888 Eucalyptus grandis HOM05D000032 ORTHO05D008248 8.4e-31 137.5 129 55.0
COL.COLO4_15998 Corchorus olitorius HOM05D000032 ORTHO05D008248 1.1e-30 137.1 129 55.0
Gohir.D09G231300 Gossypium hirsutum HOM05D000032 ORTHO05D008248 1.1e-30 137.1 129 54.3
Gorai.006G254000 Gossypium raimondii HOM05D000032 ORTHO05D008248 1.1e-30 137.1 129 54.3
Cc03_g06800 Coffea canephora HOM05D000032 ORTHO05D008248 1.4e-30 136.7 116 62.9
Psat3g146960 Pisum sativum HOM05D000032 ORTHO05D008248 1.4e-30 136.7 129 53.5
Actinidia32966 Actinidia chinensis HOM05D000032 ORTHO05D008248 1.9e-30 136.3 129 53.5
Gohir.A09G230200 Gossypium hirsutum HOM05D000032 ORTHO05D008248 1.9e-30 136.3 129 54.3
Phvul.010G094600 Phaseolus vulgaris HOM05D000032 ORTHO05D008248 4.2e-30 135.2 130 54.6
MELO3C023052.2 Cucumis melo HOM05D000032 ORTHO05D008248 5.5e-30 134.8 129 56.6
Solyc09g090740.4 Solanum lycopersicum HOM05D000032 ORTHO05D008248 7.1e-30 134.4 116 62.1
Sopen09g033680 Solanum pennellii HOM05D000032 ORTHO05D008248 7.1e-30 134.4 116 62.1
Thecc.04G268600 Theobroma cacao HOM05D000032 ORTHO05D008248 7.1e-30 134.4 129 55.0
Psat3g117880 Pisum sativum HOM05D000032 ORTHO05D008248 9.3e-30 134.0 129 51.9
Ca_03626_v3 Cicer arietinum L. HOM05D000032 ORTHO05D008248 1.2e-29 133.7 129 52.7
ECA232G1204 Erigeron canadensis HOM05D000032 ORTHO05D008248 1.2e-29 133.7 118 61.0
Migut.G00589 Erythranthe guttata HOM05D000032 ORTHO05D008248 1.2e-29 133.7 116 61.2
PSO063G0133 Papaver somniferum HOM05D000032 ORTHO05D008248 1.2e-29 133.7 116 59.5
PSO675G8858 Papaver somniferum HOM05D000032 ORTHO05D008248 1.2e-29 133.7 116 59.5
CsaV3_2G012320 Cucumis sativus L. HOM05D000032 ORTHO05D008248 1.6e-29 133.3 129 56.6
CAN.G812.30 Capsicum annuum HOM05D000032 ORTHO05D008248 2.1e-29 132.9 116 61.2
AUR62006490 Chenopodium quinoa HOM05D000032 ORTHO05D008248 2.1e-29 132.9 129 51.2
Medtr7g057250 Medicago truncatula HOM05D000032 ORTHO05D008248 2.1e-29 132.9 129 51.9
PGSC0003DMG400001506 Solanum tuberosum HOM05D000032 ORTHO05D008248 2.7e-29 132.5 116 61.2
PGR142G3130 Punica granatum HOM05D000032 ORTHO05D008248 3.5e-29 132.1 129 54.3
HanXRQChr14g0434201 Helianthus annuus HOM05D000032 ORTHO05D008248 4.6e-29 131.7 129 56.6
PSO339G1682 Papaver somniferum HOM05D000032 ORTHO05D008248 4.6e-29 131.7 116 58.6
Peaxi162Scf00125g01324 Petunia axillaris HOM05D000032 ORTHO05D008248 7.9e-29 131.0 116 60.3
EL10Ac3g06715 Beta vulgaris HOM05D000032 ORTHO05D008248 1.0e-28 130.6 129 53.5
AUR62025043 Chenopodium quinoa HOM05D000032 ORTHO05D008248 1.0e-28 130.6 129 50.4
ECA232G3455 Erigeron canadensis HOM05D000032 ORTHO05D008248 1.0e-28 130.6 129 55.0
SGA_v2.0_scaffold86G26859 Striga asiatica HOM05D000032 ORTHO05D008248 1.0e-28 130.6 116 60.3
Nitab4.5_0002937g0050 Nicotiana tabacum HOM05D000032 ORTHO05D008248 1.3e-28 130.2 129 54.3
Nitab4.5_0003474g0040 Nicotiana tabacum HOM05D000032 ORTHO05D008248 1.3e-28 130.2 129 54.3
Oeu023144.1 Olea europaea HOM05D000032 ORTHO05D008248 1.8e-28 129.8 129 55.8
Aqoxy5G00104 Aquilegia oxysepala HOM05D000032 ORTHO05D008248 3.9e-28 128.6 117 59.0
Lsat_1_v5_gn_2_42041 Lactuca sativa HOM05D000032 ORTHO05D008248 6.7e-28 127.9 129 54.3
Nn1g03022 Nelumbo nucifera HOM05D000032 ORTHO05D008248 6.7e-28 127.9 129 51.2
SalBow2G1692 Salvia bowleyana HOM05D000032 ORTHO05D008248 8.7e-28 127.5 129 53.5
VMungo0331G1285 Vigna mungo HOM05D000032 ORTHO05D008248 1.1e-27 127.1 130 54.6
Carub.0003s1655 Capsella rubella HOM05D000032 ORTHO05D008248 1.5e-27 126.7 129 52.7
SHI00856 Sapria himalayana HOM05D000032 ORTHO05D008248 1.9e-27 126.3 116 59.5
DCAR_024298 Daucus carota HOM05D000032 ORTHO05D008248 3.3e-27 125.6 129 52.7
Sed0024548 Sechium edule HOM05D000032 ORTHO05D008248 3.3e-27 125.6 129 53.5
Sp3g15080 Schrenkiella parvula HOM05D000032 ORTHO05D008248 4.3e-27 125.2 129 51.9
AT3G16840 Arabidopsis thaliana HOM05D000032 ORTHO05D008248 9.6e-27 124.0 129 51.2
AL3G29800 Arabidopsis lyrata HOM05D000032 ORTHO05D008248 1.6e-26 123.2 129 51.2
CARHR092100 Cardamine hirsuta HOM05D000032 ORTHO05D008248 2.8e-26 122.5 129 51.9
Aa31LG8G3900 Aethionema arabicum HOM05D000032 ORTHO05D008248 1.8e-25 119.8 115 58.3
MBI10_g26047_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D008248 2.4e-25 119.4 116 55.2
Thhalv10020025m.g Eutrema salsugineum HOM05D000032 ORTHO05D008248 5.3e-25 118.2 129 51.2
BcaC09g48642 Brassica carinata HOM05D000032 ORTHO05D008248 1.2e-24 117.1 115 56.5
A01p37420 Brassica napus HOM05D000032 ORTHO05D008248 1.2e-24 117.1 115 56.5
C01p47350 Brassica napus HOM05D000032 ORTHO05D008248 1.2e-24 117.1 115 56.5
BolC1t04705H Brassica oleracea HOM05D000032 ORTHO05D008248 1.2e-24 117.1 115 56.5
BraA01t03799Z Brassica rapa HOM05D000032 ORTHO05D008248 1.2e-24 117.1 115 56.5
HPP92_005024 Vanilla planifolia HOM05D000032 ORTHO05D008248 1.2e-24 117.1 129 49.6
ClCG06G007350 Citrullus lanatus HOM05D000032 ORTHO05D008248 1.5e-24 116.7 120 55.8
BcaB04g20873 Brassica carinata HOM05D000032 ORTHO05D008248 2.0e-24 116.3 115 55.7
CDE02G1179 Ceratophyllum demersum HOM05D000032 ORTHO05D008248 4.5e-24 115.2 116 49.1
Zm00001eb077380 Zea mays HOM05D000032 ORTHO05D008248 1.1e-22 110.5 129 45.7
CARHR247950 Cardamine hirsuta HOM05D000032 ORTHO05D008248 9.3e-22 107.5 116 53.4
Os04g0510400 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D008248 3.9e-20 102.1 129 42.6
ATR1096G059 Amborella trichopoda HOM05D000032 ORTHO05D008248 3.7e-18 95.5 143 42.0
SMO134G0139 Selaginella moellendorffii HOM05D000032 ORTHO05D008248 6.5e-15 84.7 129 41.9
Mapoly0133s0003 Marchantia polymorpha HOM05D000032 ORTHO05D008248 5.1e-12 75.1 123 39.8
Pp3c17_22010 Physcomitrium patens HOM05D000032 ORTHO05D008248 3.2e-06 55.8 74 41.9


User provided reference genes

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