Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 3.5e-268 928.3 724 100.0
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 2.0e-242 842.8 509 90.8
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.2e-199 700.7 524 67.6
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 2.8e-164 583.2 523 65.2
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 4.8e-164 582.4 517 69.8
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 1.6e-159 567.4 517 63.6
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 3.9e-158 562.8 520 66.2
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 2.1e-156 557.0 510 66.1
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.5e-154 549.3 476 71.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 7.2e-152 542.0 476 70.6
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.5e-151 539.7 476 67.6
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 3.8e-145 519.6 518 61.2
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 2.5e-144 516.9 526 62.0
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 4.2e-144 516.2 448 57.1
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 2.5e-141 506.9 526 62.5
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 3.4e-138 496.5 531 61.8
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.4e-138 496.5 526 58.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 4.5e-138 496.1 531 61.8
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 5.0e-137 492.7 528 59.8
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.9e-136 490.7 508 62.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.8e-134 484.2 453 65.8
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 1.5e-133 481.1 505 62.0
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 3.3e-133 479.9 542 56.3
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 7.4e-133 478.8 530 58.5
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.7e-132 477.6 528 59.7
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 4.8e-132 476.1 518 58.7
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.1e-131 474.9 528 59.5
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 4.1e-131 473.0 532 57.9
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.6e-130 471.1 523 59.7
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 4.5e-130 469.5 530 57.9
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.7e-129 467.6 511 59.1
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.5e-128 464.5 488 61.5
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.9e-128 464.2 522 57.5
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.1e-127 459.1 510 56.1
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 6.1e-127 459.1 516 58.5
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.0e-126 458.4 510 55.9
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.8e-126 457.6 514 57.6
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 8.8e-126 455.3 516 56.4
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 8.8e-126 455.3 516 59.5
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 4.4e-125 453.0 413 67.6
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 5.7e-125 452.6 517 56.9
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 6.3e-124 449.1 356 72.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 8.2e-124 448.7 528 56.4
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.4e-123 448.0 514 52.1
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.8e-123 447.6 511 57.7
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.1e-123 446.8 478 56.9
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 4.1e-123 446.4 436 64.7
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 5.3e-123 446.0 516 56.6
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 7.0e-123 445.7 467 60.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 9.1e-123 445.3 446 61.7
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 5.9e-122 442.6 497 57.3
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.9e-122 442.6 528 55.7
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 7.7e-122 442.2 516 56.8
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 7.7e-122 442.2 462 60.8
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 7.7e-122 442.2 440 63.2
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.7e-121 441.0 375 67.5
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.9e-121 440.3 501 54.5
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 3.8e-121 439.9 534 56.0
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 5.0e-121 439.5 435 63.0
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 6.5e-121 439.1 440 60.7
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.1e-120 438.3 440 62.3
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.9e-120 437.6 351 71.2
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 2.5e-120 437.2 454 55.3
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.2e-120 436.4 508 56.7
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.2e-120 436.4 508 56.7
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.6e-119 434.5 432 60.9
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.1e-119 432.6 540 54.3
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.4e-118 431.4 526 46.8
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 4.0e-118 429.9 441 51.2
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.2e-117 428.3 435 61.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.6e-117 427.2 476 56.9
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 5.7e-117 426.0 557 53.0
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.8e-116 423.7 475 58.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 4.1e-115 419.9 510 54.9
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 9.1e-115 418.7 522 54.8
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.0e-114 417.5 527 54.3
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.5e-112 410.6 525 54.1
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.2e-112 410.2 323 76.2
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.2e-112 410.2 436 50.0
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 9.4e-112 408.7 514 54.3
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.2e-111 408.3 357 68.3
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 4.7e-111 406.4 551 49.9
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.0e-110 405.2 510 55.1
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.3e-110 404.1 431 60.8
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.6e-109 400.6 452 58.0
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.1e-107 395.2 375 65.3
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.1e-107 395.2 375 65.3
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 9.2e-107 392.1 376 65.4
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 7.7e-106 389.0 376 65.2
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.9e-105 387.1 376 64.9
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.8e-105 386.7 444 56.5
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 5.0e-105 386.3 324 73.1
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 6.6e-105 386.0 357 65.3
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 6.6e-105 386.0 315 72.1
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.2e-101 375.2 300 75.0
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 9.8e-101 372.1 315 70.2
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.2e-100 370.9 342 64.3
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 2.4e-99 367.5 352 62.5
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 5.4e-99 366.3 442 55.7
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.3e-94 350.9 428 55.8
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 9.2e-91 339.0 359 61.0
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.9e-72 278.1 357 44.3
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.8e-63 246.9 187 63.1
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.0e-61 241.5 284 45.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.3e-60 238.8 511 32.7
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.1e-54 217.6 198 55.1
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 9.6e-40 169.5 363 42.7
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 2.0e-37 161.8 350 36.6
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 8.2e-31 139.8 348 42.2
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 2.7e-26 124.8 218 53.7
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.8e-20 104.4 133 39.1
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.1e-14 84.3 46 80.4
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 9.1e-14 83.2 127 37.0


User provided reference genes

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