Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 9.3e-259 896.3 449 100.0
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 5.3e-206 721.1 412 88.6
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.5e-187 659.1 412 82.3
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 7.0e-182 641.0 412 80.3
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 9.2e-182 640.6 412 80.1
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.0e-177 625.5 403 80.4
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 4.4e-168 595.1 410 75.9
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.3e-164 583.6 414 72.7
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 8.1e-162 574.3 415 70.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.1e-161 573.9 415 70.8
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 5.1e-156 555.1 421 69.6
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.1e-155 553.9 417 71.0
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.1e-149 533.1 408 69.1
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 7.8e-149 531.2 415 68.7
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 4.3e-147 525.4 402 69.2
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 4.3e-147 525.4 404 67.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 7.3e-147 524.6 403 67.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 9.6e-147 524.2 415 66.7
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.7e-146 521.9 415 68.0
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 4.7e-146 521.9 415 67.7
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.1e-145 520.8 415 67.7
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 6.9e-145 518.1 402 66.2
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 9.0e-145 517.7 395 69.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 9.0e-145 517.7 415 65.1
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.2e-144 517.3 401 68.1
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.7e-143 513.5 397 67.8
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.2e-143 513.1 410 65.4
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 2.9e-143 512.7 414 65.2
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.9e-143 512.7 410 65.4
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 4.9e-143 511.9 416 67.5
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 8.4e-143 511.1 402 67.9
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 8.4e-143 511.1 409 65.3
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 4.2e-142 508.8 417 67.4
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.2e-141 507.3 395 65.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.5e-141 505.8 402 65.7
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 6.0e-141 505.0 402 65.7
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.3e-140 503.1 395 65.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 2.3e-140 503.1 400 67.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 6.6e-140 501.5 423 64.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 8.7e-140 501.1 399 66.2
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 3.3e-139 499.2 411 63.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.4e-137 493.0 417 64.0
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 4.0e-137 492.3 411 62.8
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 6.9e-137 491.5 428 61.9
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 6.9e-137 491.5 411 61.8
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.2e-136 490.7 378 66.4
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.4e-136 489.2 372 69.1
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 3.4e-136 489.2 416 63.5
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 5.8e-136 488.4 415 64.8
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.1e-134 484.2 417 62.4
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.4e-134 483.8 397 66.2
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.4e-134 483.0 410 62.9
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 6.0e-133 478.4 417 65.0
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.0e-132 477.6 419 60.4
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.3e-132 477.2 410 61.7
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 2.3e-132 476.5 402 62.7
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 3.9e-132 475.7 415 61.9
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 3.9e-132 475.7 397 64.0
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 3.3e-131 472.6 425 60.0
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.3e-131 472.6 409 63.6
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 3.3e-131 472.6 414 62.1
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.8e-130 468.8 439 59.2
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 8.1e-130 468.0 397 63.2
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 3.1e-129 466.1 408 62.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.8e-128 461.8 430 59.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 4.9e-127 458.8 391 63.2
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 6.4e-127 458.4 416 62.0
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.6e-125 453.8 404 61.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 4.6e-125 452.2 416 59.9
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.0e-124 451.1 354 66.9
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.0e-124 451.1 398 61.1
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.3e-124 449.9 412 60.0
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-123 447.2 338 68.9
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.1e-122 443.4 409 58.7
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.1e-122 443.4 409 60.1
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.4e-121 440.7 367 64.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 4.5e-120 435.6 409 59.2
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 7.6e-120 434.9 464 54.1
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.3e-119 434.1 313 72.2
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.4e-118 430.6 397 57.7
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.9e-118 430.3 405 57.0
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-115 421.0 396 58.8
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.2e-114 416.8 355 63.9
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 3.7e-114 416.0 435 52.9
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 6.3e-114 415.2 395 54.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.7e-111 407.1 416 55.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.4e-104 382.9 364 53.3
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 7.7e-104 381.7 411 54.3
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 2.3e-100 370.2 380 54.2
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 3.5e-96 356.3 469 45.8
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.2e-94 349.4 332 60.2
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.0e-92 343.2 339 58.7
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.2e-92 342.4 341 58.4
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.3e-91 339.7 366 54.4
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-90 337.8 300 62.3
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-89 334.7 300 62.0
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-89 334.7 300 62.0
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-89 334.7 300 62.0
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.4e-89 333.6 286 65.0
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 5.3e-89 332.4 410 44.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.6e-88 330.1 327 51.1
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 3.8e-87 326.2 442 44.6
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.2e-85 321.2 213 76.5
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 6.8e-84 315.5 296 58.4
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.3e-70 270.0 272 55.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.2e-67 261.5 211 65.4
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.2e-64 251.5 233 58.8
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.1e-54 218.4 602 29.9
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 7.3e-38 162.5 89 89.9
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 3.6e-37 160.2 178 47.2
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.4e-27 127.1 132 50.8
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 4.9e-26 123.2 212 39.6
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.6e-19 100.9 122 48.4
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.5e-16 90.5 110 44.5
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-13 81.6 78 59.0
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-13 81.6 78 59.0
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-13 81.6 78 59.0
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 4.0e-12 77.0 58 72.4
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 7.9e-08 62.8 59 54.2
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 1.8e-07 61.6 47 57.4


User provided reference genes

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