Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 5.0e-114 414.8 277 100.0
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.2e-96 357.1 279 91.4
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 9.9e-78 294.3 278 76.3
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 2.9e-69 266.2 285 73.7
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.6e-67 260.4 283 73.5
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.9e-67 258.1 283 73.1
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.2e-59 234.2 284 69.4
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.1e-55 221.1 269 69.9
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.4e-54 216.1 283 67.1
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.5e-52 209.9 285 66.3
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 3.1e-47 193.0 281 64.1
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.3e-45 187.6 284 61.6
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.9e-45 186.4 155 71.6
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 2.8e-40 169.9 283 60.8
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.2e-38 164.5 282 59.9
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.0e-38 163.7 286 59.4
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.9e-38 162.2 281 60.9
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 7.7e-38 161.8 285 58.9
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.0e-37 161.4 280 60.4
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.9e-37 159.8 281 61.2
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 3.8e-37 159.5 284 60.9
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 3.8e-37 159.5 279 58.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 5.0e-37 159.1 290 58.6
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.1e-36 157.9 288 56.9
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.5e-36 155.6 278 60.1
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.2e-35 154.5 284 57.0
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.6e-35 154.1 278 59.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 2.7e-35 153.3 281 59.4
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 2.7e-35 153.3 285 60.7
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.6e-35 152.9 286 58.0
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 5.2e-34 149.1 283 58.7
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 6.7e-34 148.7 283 57.2
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 1.2e-33 147.9 281 58.4
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.2e-33 147.9 280 47.5
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 3.3e-33 146.4 282 59.6
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 4.4e-33 146.0 280 57.5
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 4.4e-33 146.0 287 57.1
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 2.2e-32 143.7 281 58.0
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 8.2e-32 141.7 282 57.4
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.1e-31 141.4 280 57.9
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 3.1e-31 139.8 284 56.7
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 5.3e-31 139.0 282 54.3
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 7.0e-31 138.7 285 56.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 9.1e-31 138.3 282 57.1
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.6e-30 137.5 283 54.8
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 3.5e-30 136.3 280 56.4
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 3.5e-30 136.3 289 56.1
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.2e-29 133.7 277 54.5
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 8.5e-29 131.7 278 35.3
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.1e-28 131.3 240 60.8
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 1.5e-28 131.0 319 49.5
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.9e-28 130.6 283 50.5
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 3.2e-28 129.8 244 60.2
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.2e-27 127.9 276 56.2
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.2e-27 127.9 285 54.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.7e-27 126.7 281 54.8
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.7e-27 126.7 238 54.6
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 6.1e-27 125.6 280 57.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 6.1e-27 125.6 288 54.5
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.3e-26 123.6 265 54.0
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 8.8e-26 121.7 277 49.5
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.2e-25 121.3 284 52.1
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.5e-25 120.9 277 53.1
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.5e-25 120.9 284 53.9
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.0e-25 120.6 283 54.4
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.3e-24 117.9 292 51.4
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.7e-24 117.5 247 57.9
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 2.2e-24 117.1 113 55.8
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.7e-24 116.3 269 39.4
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 8.3e-24 115.2 290 53.1
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.4e-23 114.4 317 40.1
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.4e-23 114.4 286 53.5
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.6e-22 110.9 280 52.5
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 2.0e-22 110.5 121 51.2
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 2.0e-22 110.5 121 51.2
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 2.0e-22 110.5 242 57.9
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 3.5e-22 109.8 291 50.2
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 4.5e-22 109.4 274 55.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 3.8e-21 106.3 277 46.6
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 3.8e-21 106.3 286 46.2
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.1e-20 104.8 307 39.7
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.9e-20 104.0 149 51.0
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 2.5e-20 103.6 291 52.2
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 7.2e-20 102.1 125 47.2
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.6e-19 100.9 300 47.3
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.8e-19 100.1 292 47.9
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 8.0e-19 98.6 275 53.1
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.8e-18 97.4 282 51.4
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 4.0e-18 96.3 295 51.5
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 5.2e-18 95.9 275 52.4
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.2e-17 94.7 275 52.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.6e-17 93.6 286 51.0
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.4e-17 93.2 149 48.3
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 1.3e-16 91.3 144 41.7
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.2e-16 90.5 286 50.3
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.8e-15 87.4 150 46.7
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 4.1e-15 86.3 184 57.1
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 2.3e-13 80.5 114 44.7
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 8.6e-13 78.6 285 46.7
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.9e-12 77.4 83 50.6
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 3.7e-08 63.2 210 45.7
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.4e-07 60.5 148 33.1
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 5.4e-07 59.3 294 43.9
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 7.0e-07 58.9 38 60.5
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 5.9e-06 55.8 121 34.7
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 7.8e-06 55.5 28 75.0
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.8e-06 55.5 65 50.8


User provided reference genes

Program Settings