Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1245800 Malus domestica HOM05D002705 ORTHO05D004955 1.5e-107 392.9 201 100.0
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 7.2e-102 374.0 201 96.5
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 1.6e-101 372.9 201 97.0
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 1.3e-66 256.9 212 67.5
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 1.1e-54 217.2 131 87.8
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 1.4e-41 173.7 211 55.9
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 5.2e-36 155.2 210 52.4
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 8.9e-36 154.5 212 54.2
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 1.2e-35 154.1 210 51.0
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.4e-35 152.1 210 51.0
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.6e-32 142.1 206 51.0
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 1.6e-24 117.1 61 91.8
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 8.7e-15 84.7 254 33.1
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 8.7e-15 84.7 254 33.1
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 8.7e-15 84.7 232 37.1
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 1.1e-14 84.3 201 40.8
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 2.5e-14 83.2 157 43.9
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 1.3e-13 80.9 299 28.4
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 4.8e-13 79.0 233 32.2
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 4.8e-13 79.0 241 34.4
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 1.4e-12 77.4 221 35.3
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 5.3e-12 75.5 246 32.9
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 1.5e-11 73.9 221 34.8
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 5.8e-11 72.0 232 33.6
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 1.4e-09 67.4 188 34.6
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 1.9e-09 67.0 233 29.6
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 2.4e-09 66.6 196 35.7
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 3.2e-09 66.2 201 32.8
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 3.2e-09 66.2 201 32.8
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 3.2e-09 66.2 223 30.9
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 9.3e-09 64.7 202 34.7
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 6.0e-08 62.0 188 33.5
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 7.9e-08 61.6 233 32.6
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 8.7e-07 58.2 196 32.1
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 1.5e-06 57.4 229 28.4
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 1.5e-06 57.4 204 30.4
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 1.9e-06 57.0 195 33.3
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 3.3e-06 56.2 169 33.1
Lsat_1_v5_gn_9_1780 Lactuca sativa HOM05D002705 ORTHO05D004955 4.3e-06 55.8 87 47.1
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 5.6e-06 55.5 239 28.9
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 5.6e-06 55.5 171 32.2
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 7.4e-06 55.1 209 31.1
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 7.4e-06 55.1 171 32.2
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 7.4e-06 55.1 301 26.2
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 7.4e-06 55.1 185 30.3


User provided reference genes

Program Settings