Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1258800 Malus domestica HOM05D000604 ORTHO05D004856 8.2e-119 430.6 257 100.0
Prupe.4G106000 Prunus persica HOM05D000604 ORTHO05D004856 6.4e-47 191.8 223 53.8
MD10G1238300 Malus domestica HOM05D000604 ORTHO05D004856 7.9e-37 158.3 148 79.1
FvH4_3g11840 Fragaria vesca HOM05D000604 ORTHO05D004856 2.6e-32 143.3 224 51.8
FAN25G0854 Fragaria x ananassa HOM05D000604 ORTHO05D004856 3.8e-31 139.4 223 46.2
FAN16G0408 Fragaria x ananassa HOM05D000604 ORTHO05D004856 9.3e-30 134.8 275 39.3
FAN21G2591 Fragaria x ananassa HOM05D000604 ORTHO05D004856 2.7e-29 133.3 227 50.2
Hma1.2p1_0589F.1_g184700 Hydrangea macrophylla HOM05D000604 ORTHO05D004856 4.6e-29 132.5 227 39.6
Manes.13G073400 Manihot esculenta HOM05D000604 ORTHO05D004856 6.1e-29 132.1 228 39.9
PGR119G0174 Punica granatum HOM05D000604 ORTHO05D004856 1.8e-28 130.6 230 40.9
Thecc.06G136200 Theobroma cacao HOM05D000604 ORTHO05D004856 1.8e-28 130.6 227 38.8
Cfa008710 Carpinus fangiana HOM05D000604 ORTHO05D004856 6.7e-28 128.6 227 37.0
Gohir.A10G046400 Gossypium hirsutum HOM05D000604 ORTHO05D004856 1.1e-27 127.9 227 37.9
Nitab4.5_0000632g0160 Nicotiana tabacum HOM05D000604 ORTHO05D004856 1.1e-27 127.9 233 39.9
Nitab4.5_0000844g0350 Nicotiana tabacum HOM05D000604 ORTHO05D004856 1.1e-27 127.9 232 37.9
Haze_11719 Corylus avellana HOM05D000604 ORTHO05D004856 1.5e-27 127.5 227 37.9
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 1.5e-27 127.5 227 37.0
Cpa.g.sc192.5 Carica papaya HOM05D000604 ORTHO05D004856 1.9e-27 127.1 238 37.4
Sabra03G0108600 Salix brachista HOM05D000604 ORTHO05D004856 1.9e-27 127.1 235 37.4
CiPaw.04G077700 Carya illinoinensis HOM05D000604 ORTHO05D004856 4.3e-27 125.9 227 37.4
Solyc02g081940.3 Solanum lycopersicum HOM05D000604 ORTHO05D004856 4.3e-27 125.9 228 37.7
Peaxi162Scf00036g01624 Petunia axillaris HOM05D000604 ORTHO05D004856 5.7e-27 125.6 228 37.7
Potri.003G149600 Populus trichocarpa HOM05D000604 ORTHO05D004856 5.7e-27 125.6 238 38.7
PGSC0003DMG400007320 Solanum tuberosum HOM05D000604 ORTHO05D004856 9.7e-27 124.8 228 37.3
Gohir.D10G047700 Gossypium hirsutum HOM05D000604 ORTHO05D004856 1.3e-26 124.4 227 37.0
Gorai.011G050800 Gossypium raimondii HOM05D000604 ORTHO05D004856 1.3e-26 124.4 227 37.0
TWI73G0328 Tripterygium wilfordii HOM05D000604 ORTHO05D004856 1.3e-26 124.4 244 41.4
Duzib235G1121 Durio zibethinus HOM05D000604 ORTHO05D004856 1.6e-26 124.0 228 38.6
CANSAT56G2059 Cannabis sativa HOM05D000604 ORTHO05D004856 2.8e-26 123.2 233 37.8
Hund20696 Selenicereus undatus HOM05D000604 ORTHO05D004856 2.8e-26 123.2 232 38.4
TAR371G0160 Trochodendron aralioides HOM05D000604 ORTHO05D004856 4.8e-26 122.5 232 37.1
Sc24g0002870 Simmondsia chinensis HOM05D000604 ORTHO05D004856 6.3e-26 122.1 227 38.3
Cc09_g04940 Coffea canephora HOM05D000604 ORTHO05D004856 8.2e-26 121.7 235 41.3
COL.COLO4_30935 Corchorus olitorius HOM05D000604 ORTHO05D004856 1.1e-25 121.3 230 36.1
Dinv05871 Davidia involucrata HOM05D000604 ORTHO05D004856 1.1e-25 121.3 223 37.7
arahy.Tifrunner.gnm1.ann1.GY8SZ4 Arachis hypogaea HOM05D000604 ORTHO05D004856 1.4e-25 120.9 235 36.2
arahy.Tifrunner.gnm1.ann1.2H30NS Arachis hypogaea HOM05D000604 ORTHO05D004856 1.8e-25 120.6 227 37.4
vmacro11016 Vaccinium macrocarpon HOM05D000604 ORTHO05D004856 3.1e-25 119.8 234 38.5
MBI18_g32818_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D004856 4.1e-25 119.4 242 33.5
Lsat_1_v5_gn_7_29360 Lactuca sativa HOM05D000604 ORTHO05D004856 5.3e-25 119.0 171 43.3
Atru.BG.155.p Acer truncatum HOM05D000604 ORTHO05D004856 9.1e-25 118.2 160 44.4
EL10Ac2g02981 Beta vulgaris HOM05D000604 ORTHO05D004856 9.1e-25 118.2 216 39.4
Rhsim02G0169700 Rhododendron simsii HOM05D000604 ORTHO05D004856 5.9e-24 115.5 234 35.9
AUR62039584 Chenopodium quinoa HOM05D000604 ORTHO05D004856 1.7e-23 114.0 167 42.5
AUR62019648 Chenopodium quinoa HOM05D000604 ORTHO05D004856 5.0e-23 112.5 165 42.4
HanXRQChr04g0119081 Helianthus annuus HOM05D000604 ORTHO05D004856 5.0e-23 112.5 234 37.6
Medtr7g094660 Medicago truncatula HOM05D000604 ORTHO05D004856 5.0e-23 112.5 223 35.9
Ca_08573_v3 Cicer arietinum L. HOM05D000604 ORTHO05D004856 1.1e-22 111.3 224 36.6
CsaV3_4G006300 Cucumis sativus L. HOM05D000604 ORTHO05D004856 1.4e-22 110.9 176 38.1
Migut.B01297 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.4e-22 110.9 240 42.5
MELO3C016321.2 Cucumis melo HOM05D000604 ORTHO05D004856 3.2e-22 109.8 176 38.1
VMungo0647G0785 Vigna mungo HOM05D000604 ORTHO05D004856 3.2e-22 109.8 225 34.7
Glyma.13G032300 Glycine max HOM05D000604 ORTHO05D004856 2.1e-21 107.1 228 35.1
Aa31LG6G2170 Aethionema arabicum HOM05D000604 ORTHO05D004856 2.7e-21 106.7 232 34.1
Medtr7g094670 Medicago truncatula HOM05D001476 ORTHO05D002681 3.6e-21 106.3 255 32.9
PSO063G6978 Papaver somniferum HOM05D000604 ORTHO05D004856 3.6e-21 106.3 233 38.2
PSO724G1052 Papaver somniferum HOM05D000604 ORTHO05D004856 3.6e-21 106.3 228 35.5
THA.LOC104806210 Tarenaya hassleriana HOM05D000604 ORTHO05D004856 3.6e-21 106.3 224 41.5
PSO135G0531 Papaver somniferum HOM05D000604 ORTHO05D004856 4.6e-21 105.9 228 34.6
Aqoxy5G00580 Aquilegia oxysepala HOM05D000604 ORTHO05D004856 6.1e-21 105.5 229 34.1
Glyma.14G154500 Glycine max HOM05D000604 ORTHO05D004856 6.1e-21 105.5 222 35.6
Lj1g0003482 Lotus japonicus HOM05D000604 ORTHO05D004856 7.9e-21 105.1 223 34.1
CDE05G3452 Ceratophyllum demersum HOM05D000604 ORTHO05D004856 2.3e-20 103.6 232 37.9
PSO017G6514 Papaver somniferum HOM05D000604 ORTHO05D004856 3.0e-20 103.2 234 41.9
Migut.M00477 Erythranthe guttata HOM05D000604 ORTHO05D004856 6.7e-20 102.1 248 38.3
Migut.M00563 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.5e-19 100.9 246 38.2
Phvul.001G070900 Phaseolus vulgaris HOM05D000604 ORTHO05D004856 1.5e-19 100.9 224 34.4
AT4G19610 Arabidopsis thaliana HOM05D000604 ORTHO05D004856 2.6e-19 100.1 229 35.8
QL06p028587 Quercus lobata HOM05D000604 ORTHO05D004856 5.7e-19 99.0 310 29.0
Thhalv10024436m.g Eutrema salsugineum HOM05D000604 ORTHO05D004856 7.4e-19 98.6 222 34.2
Mapoly0030s0107 Marchantia polymorpha HOM05D000604 ORTHO05D004856 9.7e-19 98.2 268 28.7
RcHm_v2.0_Chr5g0019271 Rosa chinensis HOM05D000604 ORTHO05D004856 1.3e-18 97.8 150 54.0
TPR.G6171 Trifolium pratense HOM05D000604 ORTHO05D004856 1.3e-18 97.8 186 38.7
Psat2g006120 Pisum sativum HOM05D000604 ORTHO05D004856 1.7e-18 97.4 154 40.9
BcaNung01771 Brassica carinata HOM05D000604 ORTHO05D004856 2.2e-18 97.1 227 35.2
A01p11470 Brassica napus HOM05D000604 ORTHO05D004856 4.8e-18 95.9 225 35.6
BolC1t01328H Brassica oleracea HOM05D000604 ORTHO05D004856 4.8e-18 95.9 223 34.5
BraA01t01094Z Brassica rapa HOM05D000604 ORTHO05D004856 1.1e-17 94.7 223 34.5
Sp7g18180 Schrenkiella parvula HOM05D000604 ORTHO05D004856 1.1e-17 94.7 225 34.2
BcaC09g51398 Brassica carinata HOM05D000604 ORTHO05D004856 1.8e-17 94.0 223 34.1
C01p13560 Brassica napus HOM05D000604 ORTHO05D004856 1.8e-17 94.0 223 34.1
Carub.0007s2157 Capsella rubella HOM05D000604 ORTHO05D004856 4.1e-17 92.8 226 35.4
Zm00001eb430700 Zea mays HOM05D000604 ORTHO05D004856 4.1e-17 92.8 157 37.6
Zm00001eb442350 Zea mays HOM05D000604 ORTHO05D004856 4.1e-17 92.8 157 37.6
SMO301G0078 Selaginella moellendorffii HOM05D000604 ORTHO05D004856 5.3e-17 92.4 149 38.9
CANSAT35G1381 Cannabis sativa HOM05D000604 ORTHO05D004856 9.1e-17 91.7 213 33.3
Cre16.g685200 Chlamydomonas reinhardtii HOM05D000604 ORTHO05D004856 1.0e-15 88.2 176 43.2
CARHR226400 Cardamine hirsuta HOM05D000604 ORTHO05D004856 5.0e-15 85.9 228 31.6
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 6.5e-15 85.5 162 32.7
EL10Ac6g13453 Beta vulgaris HOM05D000604 ORTHO05D004856 2.7e-13 80.1 247 29.1
CSS0014014 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004856 3.6e-13 79.7 152 38.2
GSVIVG01012163001 Vitis vinifera HOM05D000604 ORTHO05D004856 1.4e-12 77.8 152 34.9
Lj2A328T81 Lonicera japonica HOM05D000604 ORTHO05D004856 2.3e-12 77.0 155 37.4
Ah.10g032200 Amaranthus hybridus HOM05D000604 ORTHO05D004856 3.9e-12 76.3 174 34.5
Nn1g08454 Nelumbo nucifera HOM05D000604 ORTHO05D004856 6.7e-12 75.5 160 33.8
Sopen02g026570 Solanum pennellii HOM05D000604 ORTHO05D004856 6.7e-12 75.5 154 33.1
MCO07G708 Micromonas commoda HOM05D000604 ORTHO05D004856 1.5e-11 74.3 173 28.3
ATR0680G299 Amborella trichopoda HOM05D000604 ORTHO05D004856 2.0e-11 73.9 42 83.3
Oeu014816.1 Olea europaea HOM05D000604 ORTHO05D004856 2.6e-11 73.6 150 38.7
Migut.O00377 Erythranthe guttata HOM05D000604 ORTHO05D004856 2.8e-10 70.1 38 86.8
SalBow8G1358 Salvia bowleyana HOM05D000604 ORTHO05D004856 3.7e-10 69.7 163 35.0
ClCG07G014770 Citrullus lanatus HOM05D000604 ORTHO05D004856 4.8e-10 69.3 147 31.3
Actinidia13225 Actinidia chinensis HOM05D000604 ORTHO05D004856 6.3e-10 68.9 207 31.4
SHI01960 Sapria himalayana HOM05D000604 ORTHO05D004856 1.8e-09 67.4 156 35.3
Lj1g0003644 Lotus japonicus HOM05D001476 ORTHO05D004856 3.1e-09 66.6 146 30.8
TPR.G31111 Trifolium pratense HOM05D000604 ORTHO05D004856 3.5e-08 63.2 38 76.3
ECA236G3264 Erigeron canadensis HOM05D000604 ORTHO05D004856 4.5e-08 62.8 152 30.9
Ah.04g154050 Amaranthus hybridus HOM05D000604 ORTHO05D004856 7.7e-08 62.0 142 28.9
Glyma.09G265100 Glycine max HOM05D000604 ORTHO05D004856 1.3e-07 61.2 153 34.6
Lalb_Chr19g0132151 Lupinus albus HOM05D000604 ORTHO05D004856 1.3e-07 61.2 157 31.2
SHI01959 Sapria himalayana HOM05D000604 ORTHO05D004856 2.2e-07 60.5 42 64.3
DCAR_007039 Daucus carota HOM05D000604 ORTHO05D004856 2.9e-07 60.1 151 32.5
Pp3c7_9260 Physcomitrium patens HOM05D000604 ORTHO05D004856 2.9e-07 60.1 112 35.7
unitig_37.g13055 Utricularia gibba HOM05D000604 ORTHO05D004856 5.0e-07 59.3 150 32.0
Medtr2g018390 Medicago truncatula HOM05D000604 ORTHO05D004856 3.2e-06 56.6 137 31.4
Migut.O00375 Erythranthe guttata HOM05D000604 ORTHO05D004856 9.4e-06 55.1 167 39.5
Sabra01G0058200 Salix brachista HOM05D000604 ORTHO05D004856 9.4e-06 55.1 43 62.8


User provided reference genes

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