Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.4e-292 1008.8 490 100.0
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 2.9e-237 825.1 499 81.6
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 6.4e-224 780.8 490 77.8
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.2e-222 776.5 488 77.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 2.3e-221 772.3 490 76.9
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 9.9e-201 703.7 496 68.8
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.8e-200 701.8 448 75.9
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 6.4e-200 701.0 448 75.9
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 2.3e-197 692.6 488 69.7
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.9e-197 691.8 486 69.8
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 5.1e-197 691.4 492 68.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.9e-196 689.5 486 69.1
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 5.6e-196 688.0 493 66.9
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 2.4e-194 682.6 488 68.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.5e-193 679.9 484 69.0
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 2.0e-193 679.5 480 69.8
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 3.4e-193 678.7 484 68.8
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.3e-192 676.8 499 67.3
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.2e-192 676.0 487 68.0
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.1e-191 673.7 492 67.9
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.6e-190 669.8 493 66.9
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.1e-190 669.5 494 66.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.0e-189 667.2 494 67.8
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.3e-189 666.8 486 67.1
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.8e-189 666.4 486 67.1
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 3.0e-189 665.6 493 66.7
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 3.0e-189 665.6 494 67.2
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 8.7e-189 664.1 531 64.2
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.1e-188 663.7 486 66.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 5.6e-188 661.4 491 65.8
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 4.8e-187 658.3 494 64.4
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.4e-186 656.8 473 68.3
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 5.3e-186 654.8 466 68.2
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.5e-185 653.3 494 65.0
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 2.4e-183 646.0 484 66.5
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 4.2e-183 645.2 492 66.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 8.7e-181 637.5 500 65.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 7.4e-180 634.4 495 64.8
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.1e-178 630.6 523 61.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.4e-178 629.4 476 66.6
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 2.4e-178 629.4 494 63.8
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 2.6e-177 625.9 515 63.3
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 5.8e-177 624.8 489 63.8
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 7.1e-175 617.8 495 63.0
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 9.3e-175 617.5 506 62.6
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.6e-174 616.7 490 62.4
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.7e-174 615.9 510 62.4
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 3.5e-174 615.5 497 61.6
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 4.6e-174 615.1 487 62.0
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.3e-173 613.6 492 61.8
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.8e-173 613.2 496 63.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 1.8e-173 613.2 491 62.9
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.9e-172 609.8 491 62.5
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.6e-171 606.7 491 62.9
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.8e-171 605.9 490 63.3
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.1e-170 604.0 489 60.9
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 4.1e-170 602.1 497 62.4
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 5.3e-170 601.7 459 64.5
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 6.9e-170 601.3 493 61.1
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 6.9e-170 601.3 481 60.5
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 9.0e-170 600.9 494 61.5
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.0e-169 599.7 499 62.9
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 3.4e-169 599.0 498 60.0
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 4.5e-169 598.6 489 61.6
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 5.0e-168 595.1 522 59.4
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 8.5e-168 594.3 494 60.7
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 8.5e-168 594.3 487 62.0
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.1e-167 594.0 475 61.9
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 9.3e-167 590.9 504 60.5
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 2.1e-166 589.7 482 60.0
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 4.6e-166 588.6 494 61.3
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.3e-165 586.3 482 60.8
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 3.9e-165 585.5 485 60.2
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 5.1e-165 585.1 453 64.5
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 8.7e-165 584.3 450 63.8
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 7.4e-164 581.3 492 59.1
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 7.4e-164 581.3 489 59.7
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 4.8e-163 578.6 501 57.5
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 6.3e-163 578.2 494 58.7
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 6.3e-163 578.2 494 58.7
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 6.3e-163 578.2 465 61.3
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.4e-162 577.0 494 58.1
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.2e-161 573.9 483 61.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 3.8e-160 568.9 494 58.3
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.4e-157 560.5 453 61.8
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 2.3e-157 559.7 455 63.5
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 5.1e-157 558.5 507 58.8
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.7e-155 553.5 490 58.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.4e-154 550.4 480 56.0
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.2e-152 543.1 482 55.4
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 2.9e-152 542.7 506 56.5
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 4.7e-150 535.4 433 63.5
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.5e-148 530.4 489 56.6
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.7e-147 526.9 507 54.0
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 3.0e-141 506.1 488 56.6
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.3e-139 500.7 523 51.6
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.3e-139 500.7 521 51.6
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 8.6e-128 461.5 315 71.1
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 5.5e-127 458.8 489 51.9
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 4.0e-125 452.6 563 46.0
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 3.7e-123 446.0 482 49.0
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.6e-121 440.7 410 55.9
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 9.5e-119 431.4 352 63.4
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.0e-117 427.9 553 44.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.2e-117 425.6 406 55.9
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 4.3e-111 406.0 316 67.4
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.2e-102 375.6 354 56.2
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 3.2e-98 363.2 461 45.1
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.2e-97 361.3 494 43.5
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 3.0e-96 356.7 282 63.1
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.1e-73 280.8 358 46.9
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.1e-61 241.9 354 39.5
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.0e-61 240.0 141 76.6
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.9e-58 231.1 382 36.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 5.9e-44 183.0 830 24.5
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.6e-39 167.5 95 81.1
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 5.7e-39 166.4 337 31.8
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 6.1e-33 146.4 119 59.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.0e-33 146.0 135 63.0
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 4.2e-26 123.6 77 75.3
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 8.8e-24 115.9 131 50.4
MD10G1121100 Malus domestica HOM05D006341 ORTHO05D000377 1.3e-11 75.5 43 81.4
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 5.5e-10 70.1 131 35.1
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 3.7e-06 57.4 31 77.4


User provided reference genes

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